EWM21642.1, cds9101 (CDS) Nannochloropsis gaditana

Overview
NameEWM21642.1
Unique Namecds9101
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:404008..404052 +
Alignment locationKK037251.1:404165..404362 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21642.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g82.1974.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:404008..404052 +
KK037251.1supercontigKK037251.1:404165..404362 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21642.1 vs. NCBI_GenBank
Match: gi|585101897|gb|EWM21642.1| (hypothetical protein Naga_100012g82 [Nannochloropsis gaditana])

HSP 1 Score: 168.703 bits (426), Expect = 3.583e-53
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:    1 MFRNSGPKWVELCSQVLSHRDDVVLLLQVDKTGLITPAVAARRPTSSYESVLHRYQACYQDIRTYHIYKISNSLLPMRGA 80
            MFRNSGPKWVELCSQVLSHRDDVVLLLQVDKTGLITPAVAARRPTSSYESVLHRYQACYQDIRTYHIYKISNSLLPMRGA
Sbjct:    1 MFRNSGPKWVELCSQVLSHRDDVVLLLQVDKTGLITPAVAARRPTSSYESVLHRYQACYQDIRTYHIYKISNSLLPMRGA 80
The following BLAST results are available for this feature:
BLAST of EWM21642.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101897|gb|EWM21642.1|3.583e-53100.00hypothetical protein Naga_100012g82 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9131rna9131Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications