rna9131, rna9131 (mRNA) Nannochloropsis gaditana

Overview
Namerna9131
Unique Namerna9131
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2046
Alignment locationKK037251.1:404008..404362 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g82.1974.mrna
Orig protein idgnl|cribi|Naga_100012g82.1974
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:404008..404362 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g82gene8854Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9131rna9131-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21642.1cds9101Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9131 ID=rna9131|Name=rna9131|organism=Nannochloropsis gaditana|type=mRNA|length=2046bp
ATGTGCAACTCGAGGGAGCATAATTTACTCTTCTGCCTTCACGCTTCATC
ACCTATTCGTGTGCCCTTGAATCTCATATCGAGAACAGCACTCCATGTAA
TGGACGAAGATGGATGCTTTGATGTCTGTGTGGCAGAGCCGGATCCCATC
GAAGTAAATTCTTTTAAGCTCTGGCTCCAGGGGCTAAGTCCCGAGTCCGC
TGCAAGACGACGCGTAAATGAGATCTTCTCAGTCCTGCGCCAATCTGTCC
ATGACAAAGATGAGCAGTCACTGCGTATGTCAGCGCTGACAAAGTCTTTT
GCGGGTTTATGTGTCGACGAGTCTGAAGTGCTCCGGCTAGTGCGCGCGTC
CCTTGCAGATGACTTCAGGCTGCTGGACCTGCTCGAGGGCTTTCTCTTCC
ATCCCCCGTCCTTCCTAGGGCAGCCCTTCGTCCAGCTGCCAAGACAGGAA
CGAATGCTCATGTTGGAGGTATACTACTCGCTCGACCCCAGCGTCGTCCG
CGAATTGTTGTGGAGGAAGCCGCTCGGCAAACGGATCGGAAAAGACTTGG
AGGACGTTGAGGGAGCGACAGGTGTCTCCTTAAGAAGCTGCCGCCGGCAG
TTCGACAATTTGAGGCGCATCTATACCCATCTAGAAGACCAGCGGGCCTT
TCAATGCCACGTCGCAGTCGTGGTGGAGGGCTCTTTCCATATCTCTACGG
TGCTGGCGTGCCAGTATACGGTCTGCTCCTTCCTCCTCTTCCATCGCTTC
GTCCTATCGCCCCCCTCCTACGACCACCCTCAGGGCCAGCCACACAGTCA
TCACCACAAGGCATCCGTGGCCCACCCGACTTCTCCAAAGCCATCACCTG
TAGAACCCTCGTCCTCCCTCCCCCCGAGCCCCCACCTGCTTCCTCCTTCC
TCCTCCCATGGTCTGGAGCCCACACGCGCGCTATCCTTCCAGGACCTGGA
GTTCATGAGTCTCGCCATCCTAACCTTCTGGGTCCCCGACACCTCGCGCA
CCGTCATGCCCGACTTGGGAGCGAAGGCAACAGAAGGCCAAGACTCTCAA
AGGAGGTCTCTGCCTGGCGCCTGCACCCCGCCGCTTGACCTGGAGAGGAG
GGGCAGCCAGACTTTGTTGTCGCTCTCCCAGCGACTGGGTCGTGTGGGCG
TTGCTGGGCGCAGGAGAGCGGGCGACATCCTTGAGTGCGGGCAAGCGCCC
GTTCCCCGGGTGGGAGGGGCCCGGTCGGTCTCGGAGGTGGCGGAGGTCCT
GTCCTCGATTGCGGACGTGATGGTGAGGGAGGACGAGGAAAGGGAGCATC
GCGGCGCCGATGAGGGCCTTGAGGAGTGTGGCAAGGGAAAGCGCGAGACT
GGCACGGACTGCGGCAGCCGCGATGCCAGGGACACGCCGGCCTTGCCTCC
TCGCCGGACCTCGTGGGCGGCCTCTGCGACCTGTCCCCCGGAAGGCTTGC
ACGGGAGAGCACGCGGTCTCTTACAATGCCGTCTGCGCTGCGCGTACGGA
ATGGAACTCGAGAAGGAGCTCCTCGTGGGCCTCCGGGAGCTGAGCCGCCT
CTTCAACGATAGCACTATCCTCGACCAGTACCAGGCCCAAGTGGCCATCC
GCCTCCTCCAGCCAGTCCCGGAGATCGGCGAGAGAGCGCTGGGAAGAGCC
ATCCGGCGGGCAGGGGGGCAAGGGGATGCCCTTGAGGGCGGGCGGGCGCG
TCTCCGGGCGGTGGAGCGTCGCTTCCGCGCAATCTTGCAGCCGTTGTCGG
CACTGGGGTGGGGGCTCTCGCTGCACAAGGAATTGAGAGACCTGTTCGAG
GACATGCTCGTCAAAGTGACCGCCCCCCTCCGAGACTTGAACCTTTCTCG
CCAAGATCTGTGCAATCTATTCTCCGCCCTCATCAGCAGCTTTCCTTGCC
TGCCTGCCTTCACTGGCAAGAGCAAAGGTCTACCGCAACGGCGCATAAAG
CAGTATGCGGTATCATGGGCAAGGTTTTTAAGCGGAGTGCTCTTGTGCAT
TCTGCACACGTACTCGACATGGCACCTTCCCTCATCACGGAGTTAG
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protein sequence of rna9131

>rna9131-protein ID=rna9131-protein|Name=rna9131|organism=Nannochloropsis gaditana|type=polypeptide|length=80bp
MFRNSGPKWVELCSQVLSHRDDVVLLLQVDKTGLITPAVAARRPTSSYES
VLHRYQACYQDIRTYHIYKISNSLLPMRGA
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mRNA from alignment at KK037251.1:404008..404362+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9131 ID=rna9131|Name=rna9131|organism=Nannochloropsis gaditana|type=mRNA|length=355bp|location=Sequence derived from alignment at KK037251.1:404008..404362+ (Nannochloropsis gaditana)
ATGTTCAGGAACTCAGGGCCTAAATGGGTCGAACTTTGCTCTCAGGTTTG
GAGAAAAATGGGAGAAAAATGTGCCAATTGTTTTGCCCATGAAGAATTCT
CAGCCCTACGTGAATATCAGCTCGATGCGTCGACATTGGACGACTGGTCC
TCTTTAGGTCTTATCACATCGAGATGATGTAGTATTGCTACTACAAGTTG
ACAAGACGGGCCTAATAACTCCCGCTGTGGCGGCACGGCGCCCGACCTCT
TCGTACGAGTCTGTGCTGCATAGATATCAGGCTTGCTATCAGGACATCAG
GACATATCATATCTATAAAATTAGCAACTCCTTATTACCTATGCGCGGAG
CTTGA
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Coding sequence (CDS) from alignment at KK037251.1:404008..404362+

>rna9131 ID=rna9131|Name=rna9131|organism=Nannochloropsis gaditana|type=CDS|length=486bp|location=Sequence derived from alignment at KK037251.1:404008..404362+ (Nannochloropsis gaditana)
ATGTTCAGGAACTCAGGGCCTAAATGGGTCGAACTTTGCTCTCAGGTCTT
ATCACATCGAGATGATGTAGTATTGCTACTACAAGTTGACAAGACGGGCC
TAATAACTCCCGCTGTGGCGGCACGGCGCCCGACCTCTTCGTACGAGTCT
GTGCTGCATAGATATCAGGCTTGCTATCAGGACATCAGGACATATCATAT
CTATAAAATTAGCAACTCCTTATTACCTATGCGCGGAGCTTGAATGTTCA
GGAACTCAGGGCCTAAATGGGTCGAACTTTGCTCTCAGGTCTTATCACAT
CGAGATGATGTAGTATTGCTACTACAAGTTGACAAGACGGGCCTAATAAC
TCCCGCTGTGGCGGCACGGCGCCCGACCTCTTCGTACGAGTCTGTGCTGC
ATAGATATCAGGCTTGCTATCAGGACATCAGGACATATCATATCTATAAA
ATTAGCAACTCCTTATTACCTATGCGCGGAGCTTGA
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Synonyms
Publications