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Properties
| Property Name | Value |
|---|
| Product | Peroxin/Dysferlin domain protein |
| Orig transcript id | gnl|cribi|Naga_100012g71.1973.mrna |
| Orig protein id | gnl|cribi|Naga_100012g71.1973 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:382434..384329 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9120 ID=rna9120|Name=rna9120|organism=Nannochloropsis gaditana|type=mRNA|length=5222bp
TTCATACAGTATAACAGAACATGGAGCCAGGATTGCGGCAGGATTACCAG
CGCTTGCGAATCAAGTCACCAGCCGAGAGGGGAGAGGGGTCTTGGTCACA
GACAGGGGTCACAGTCTCAGCGACTCACGTCAGCTATGCGGTGCCACTGC
CCACTCGCCGGGAGAGGAAGCTGAGGAACAAGGATGGGAAGTTTTTGCTT
CGCGACGTGTCGATGCGCGTGCAACCAGGTGAGCTTTGTTATCTGATGGG
GCCCTCCGGCGCCGGGAAGACAACCTTGCTCGAGGTTTTAGCCGGGCGTC
TGCGATTGGGGACTCTGCGCGGACAGGTCACCTTCAACAGCCAGCCCCGG
AACAGCACATTTTGGCATGAAAGTTCTTACGTGAAGCAAGACGACCTGCA
CATCGCTCAGTTGACCGTGCAAGAAACTTTACACTTCGCGGCCCGCTTGA
GGATGAGTGGCAAATTTTTCACCCAGGCCGAGCGCGACAGCCGCGTGGGT
GCAGTGGCCGAACTACTGGGACTCGACGTGTGTCTACACAGCATTTGTGG
CGACGCTCTCAACCGAGGCATTTCAGGGGGGCAGCTAAAGCGCCTCAGCA
TCGGCGTGGAGATCATGACCATGCCCAGCCTCATCTTCCTGGACGAGCCG
ACCAGTGGGCTCGACTCCGTGATCGCGCACGAAGGTAAGAACGGTGGCGG
CCCAGGCTGTGTGCTTTCTGGTGTTTTGCTGCGTCACATCTCTCGGTCAA
AGAGCTGTACTGACCGCAAGGCGCTCCCCATTCCTCTGGTTTTCCGCTAG
TCATGTCATTCGTCCACAAATTGGCCAAGCAACGCCGCACAGTCATTGCC
ACCATCCATCAGCCCTCTCCTGACACCTTTGCCTTGGCCACGACGGTCGT
CCTGCTTTCGGGAGGACGTCTATGCTACTGCGGGCCCTCCCCTGAGGTAA
CGGAGTACTTTCAAGGCCTCGGCTTCGCCGCGGAGGGCTTCTCCAACCCC
GCCGACTTTGCCCTCTCGGTCGTCGGGGGCTCACTGGGAACCCGTCTGGT
GCATGTGCCGGGGGGCGGCGACCATGAAGACGGCAGAGCGGACGGCAGCG
GCGGGACCGGGGGCAGCCTGCTCGGTAGCTACGGGGGAGGCAGTCGGCCC
TTGACGCCCAGGGAGTTGGCGGGGCGTTTCCAGGCATCGCCCGCATTCAG
GTGCATCACAGTGACCGGCAGCACTTCGACTGCAACGAAGGTTGCCTCCG
TGCATGCTTTCGGACCTGGGCTCGCGCCTGTCGTCGATCCCTCCGCCGCC
AAGAGGGAACGCCGGCAGCCCACCTCCTTCCCCACCGGCCTCGGGAACCA
GTGCCGGGTCCTGCTTGAACGTAGCTGGCTAACGCAGACTCGGCAGCTAG
GTTTTATTCGGGCACAAATCGCCAAAAACCTGATCGTGGCCTCCGTCTGC
GGGGCAGTCTTCTACGGGCAGGGCGCCGTGCCTCCGCCCTCGGACCAATT
CAACCAGGAGAGTTTCAACGTCTCCTCCATCTTGTTCTTCGCCATGCTGT
ACACTATCGTCGGAAATCTCCAGGCCATCCCCCAGCTCTTCACACAGCGA
GTACTGTACGTTCGCGAGCGTTCTGCTTTCCTCTACTCGACCTTCGCATA
CTGGCTGGCGAACGCCCTCGTAAACCTCCCGCTCGTGCTCTTGTGCCACG
TCATCTTCCTGAACGTCGCCTACCTTCTCGTCCAGCTTGATCGTTCCCCG
TCCGTGTTCTTCTACACACAATTCGTGACGATGCTCAATAACGTCGTCGC
TTTCACTTTCGCACAATTTTTGGCCGCCTCAGCCCCATCCGCGCAAGTAG
CATTGGCCATCTTTCCCGTGACTTTCCTATTCTTGACCTCGTTTGCAGGC
TTTACTGTGCCTTTGCAGGACCTACCATCAGGCTGGATCTGGGCGTCCTA
CATTTCCTATCCCCGTTGGTGCTACGAGGGTATCGTGGCCAGCCAGTTTT
CGGTTCGGATCGATGGGGCCTCGACGATGGAGTACTACGGGTTTGGAGGC
TGGGAGCCGGGAAAGAGCTTTTACATCCTTTTTATCTTCCTACTCCTTTT
CAATGGCTTGGTCTACTGGGGCCTGCTGCCGCGGAGGTCGCGGCTAGTGG
ACATGGAGGACAGAGAGGGAGAGATGAGAGAAAAAGGGGAGAAGAAGGGT
GCAACAACCTGCGACACGAAGGGGCTCCGAGCGCCTCTGTTGATGGACGA
TATGTGTTGCTCATCCATGGCTGTGGAAGGTGGGATTCGCGATGAGGATG
AGGAGGAGGGTATGGGTCAGGGAGGGAGGGATGGACTGCAAGGTGCTTTT
CCTCTGCATAGCAGCATGGCCAACGTGGCGGGCGGGCCGGATGGAGGGCC
TCTTTCGTCCCCCGCAGGTCCGAGCAAGGGTTTGAAACAGAAATTGCTGG
CCGCGGACGACAAGGATTTGGACATACCCCGCGTGCTTTTGGAGTCCTTG
ACCGGAACTAGCGACACTGCCTTCATTGACTCCCGCCTGAATAGCGGGGG
AGCGCGGACGAGCAACGAAAGCGGTCGCGGTGGGCATGACAGTTTCTTGT
CCCAGTTACAACAGGAAGACAGAGAAAAGGGAAGCGCGCTAGATGTTGAA
GATTTTGAAATGCGCTCATCAAACATCCCGAAGAGTGGAGGCATCCGCCT
TCGATTTCGGAACCTGACATACTCGCTTGGCTCCCGCGGCTGGCATGGAC
AACGGAAAAGCGAGTCCCGCGCGGGCAACGTCCCTGTCGCCACCCCCTTA
GCGAAAGATGCAACCGGGACCAAAAAATACCTGTTGAGAAAGGCAAGCGG
GCGCGTCAATCCCGGGGAAATGTGCGCACTCATGGGTGGGTCCGGGGCGG
GCAAGACAACCTTGCTCGACGTGCTGGCAGGGCGGAAGACGGCGGGGCTC
ATTGAGGGTGAGGTCTTCTTCAACGGCAAAGCCGGCATGCCATCTCCCAA
GCTTTGCTCATACGTCACTCAAGATAACGTGCACATCGGTTGCTTTACCG
TCCGAGAGACACTACACTTTGCCGCTTTGCTCCGGATTAAGGAAGGGGTG
AGGCCAGCGCAGCGAGAGAAGATGGTGGATGATGTCTTAGGAATGCTCGG
ACTGGACTCCGTGGCGGATGTAATGGTGGGAGATTCCTTGCGAAAAGGCA
TCTCTGGGGGACAAGCCCGTCGTTTGACAATTGGGGTAGAAATAATCAAT
TTGCCGGGAATGATTTTTTTGGATGAGCCCACCACTGGCCTGGACTCCAA
TATTTCATACGAAGTCATGGCCGCAGTTCGAAATTTGGCGAACCAAAATA
GAACGGTTTGTTGCACTATACACCAGCCATCTATTGAGGTATTTGCGCTT
TTTGACAAACTGATCCTCATGGCGAAGGGGGAGCAGGTTTATTTCGGGGC
CACCCACGAGGCAGTGAAGTACTTCTCGTCGCCGGCTCTCGACTTCGCCT
TCAGCAAGGGCGTGAACCCTGCCGAGTTCGTCATGAGCGCCTCATCAGGT
AGTATTCTGACGCGAGGAGGGCTAAAGAGGGATGTGCACGAGCTATCCGC
TCTCTACAGGGCCTCGGATCTTTTCATGCAGTTCAATGACGATTTTGATG
CGGCCGTCTTGACAGCACCTGGCGGACTCTGTCCCGGCCTCAATTCAACA
TATGGATCGGCATTGGCGGCGGAGAAAGATCTCACTTCTGCGCCCGAAAT
GTCAGCGCTAGAGAACCGCCTCTTTTTTAGAGACATGTTGCAAATAAACA
AGATCTTGATCCGTCGACAGTTCTTGAAGATGCGGCGGAACCGACGACTT
GTGGTTGTGGGCTTGATTCGCCACGTGCTTGTTGCCTTGTTCTACGGCTC
GCTGTACTGGCAAGTCGCACCTACGGCAATTCAGTCTCGACTTTCATTGC
TCTTCTTCGCAATTATGTTCGTAATGCTTGGAAACCAACAAAGCATTCCT
GCCGTCTACGAAGACCGCCTGCTCTACTACCGGGAGAAAGGCGCTCACGT
CTACGGTCCTTATTCCTATTGGATGACATGTGCTGCGTCCTTTATACCGC
AGATCATCCTTAATACGTTGCTGTATAGCGGCATTATGTACCCAATGGCT
GGGCTACACAGCAATTTTGCCTGCTTTGGGTACTTTTACTTGGTGACCAT
GCTGTGCTCGCTCTGTGCCCTCTTCTTCTGCCAGCTTCTATCGATAACGC
TTCCCAATCCGCAAACGGCAGTCGCTGTCTTTCCCGCTTCTCTCTTCATA
TTTGTACTTTTTGCTGGGTTCATCGTCCGACTTCCGTCCCTTCCTTCATG
GATAGGCGCTTGGTGCCCCGACGCAAGCTTTGCACGCTGGGCTTTCCAAG
GTTTGGTGATAAATGAACTGGACGGTAACGCCCGGGTATCTTACAAAGAC
CTTCCCGCCGTCTACTATAGCCCAAATCCATATCAAACTATGATGTCTAA
TCTTGGTTTTCAGGGATATTCGAAATGGTTCACCGTTCCAATCCTTTTGT
TAAATATGGTCCTGTTTCGAGGGTTAACGTATTTGAGTTTGATTTTCATA
AATCATGAGAGTCGGTAAAATATTACGGACAACCTTGAAGACCTCTCACT
AGGGTGAGGATTTGACGCTTTCATTGCTCATTTCACAAGCCAAAAAAGCA
TACAAATGTGTTAAGTTCGCTCGTGTCGTACAGCTCCATTCCTTGTAAGG
TTGGGCGAGAGACGCAGCATTTGTAGAAGCATTTGTCGTGTACGAACATG
CTGCAAGTGTTATTTTCATTCAATTTCAAACCCTGATCAAGGTTTTCGAG
GTTCTAGAAGCTCCTGTACTTTGACATCAGCTTTTAAATTGACATATTTG
ATTTCCGTAATATCGTGTACATGTTCTTTCCCAGACAGATGCTGCTGGCA
GAGCAGCTCGTGTATTATAATCGTGTGATCGACTCGTAACCGATCGCACT
TTCCTGTACACCATTCAGTTGATTGATAGCATACTTTCATTGGTACCGGT
TCTGCTCTACATGCAAATTATGCTCCGTCTGACGCTGCTGATCACGTTCC
TGACGACGACGCTTCAGTGAACTGTGTGACAATCTGGTCGGGGGAAGCTT
GAGGAAGAAAGGGCTGATAGACATGATGAGTGATGCCCCTAGTCCCCCAC
GGAAGAAATTCATGCTATATCC back to topprotein sequence of rna9120 >rna9120-protein ID=rna9120-protein|Name=rna9120|organism=Nannochloropsis gaditana|type=polypeptide|length=631bp
MEANPSVQCGWRSTTRRKVTSTSLIGTTPRRIMPILLTALSLLSLTKSSA
SLSGLLLSSSTSTPDRVEWSTNGTAEALAHNTGSLDGVSALPSSTSSTVT
SSARFSTQHRLVQIYENEKWEFGRGWRRPGEGGRFRTWTYADGGKSVPPQ
EAQLPDGFQWASLDWKIARDNNTDRAGWCYADHFQSFNKQHRVHRKRSFS
DRFRRRRWVRLMRSTHAKHLDDSQQLRDILLPLSVEEGEQGDGILGEKYA
SDKNGDSISFTSSGLDLLAIADLPNIECNRDVKSILSALSTCRGFLNRLR
EEYQFKGFAVTLTKSLLHRDIGCGFGIPLTPNFLMWERIDFLPTINSCLG
MFFPFCVSGWISFSYPADLVYRFLAHFLPVLPLGPQASMVLSSTGKHQSY
TKMMTGDQRNCSVDHYGGGTFGESSTSDTSAGSGPPSASAFAPGMVVTRS
RPKLKKRASVERVGFSVSCRYTRAAGPHFRVTPWLFFLPGKQLVAHLIES
ILWLMTYVWWVIKASHLPYRLLNHRESAAGIISSTQQPSTVNSTENDAFS
SRKRDGRRFKRWVSKKHAGIGYSMNFFRGGLGASLIMSISPFFLKLPPTR
LSHSSLKRRRQERDQQRQTEHNLHVEQNRYQ back to topmRNA from alignment at KK037251.1:382434..384329- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9120 ID=rna9120|Name=rna9120|organism=Nannochloropsis gaditana|type=mRNA|length=1896bp|location=Sequence derived from alignment at KK037251.1:382434..384329- (Nannochloropsis gaditana)
ATGGAGGCCAATCCTTCTGTACAATGTGGCTGGAGAAGCACAACAAGAAG
GAAGGTCACCTCAACATCTCTCATTGGAACCACACCTCGGAGGATAATGC
CAATCCTGCTGACCGCTCTCAGCCTTTTAAGCCTGACAAAATCCAGCGCA
TCATTATCAGGGTTACTTCTTTCCTCCTCCACGTCAACACCGGACAGAGT
CGAATGGTCTACAAATGGTACAGCCGAAGCTCTTGCACATAACACAGGCT
CTCTTGACGGCGTTTCAGCGCTCCCCTCTTCCACGTCTAGCACTGTTACT
TCCTCTGCCCGCTTCTCAACCCAGCATCGTCTGGTGCAAATCTATGAAAA
TGAAAAGTGGGAGTTTGGCCGTGGGTGGCGGCGCCCAGGCGAAGGCGGTC
GGTTTCGAACATGGACGTACGCTGACGGCGGGAAATCTGTTCCTCCACAA
GAAGCTCAGCTACCCGACGGGTTCCAGTGGGCGTCTTTGGATTGGAAAAT
AGCGCGGGATAATAATACTGATCGAGCTGGATGGTGCTATGCTGACCACT
TTCAGAGCTTCAACAAGCAGCATCGTGTCCATCGCAAGCGGTCGTTCAGC
GACCGCTTCCGGCGACGGCGGTGGGTGCGACTTATGCGTTCGACCCATGC
CAAGCACCTCGACGACAGCCAACAATTGCGTGATATACTATTACCGTTGT
CTGTAGAAGAAGGAGAGCAAGGGGATGGAATTTTGGGGGAAAAGTACGCC
AGTGATAAAAATGGCGATTCCATCAGTTTTACATCCAGCGGACTAGATTT
GCTTGCTATAGCCGATCTGCCCAATATCGAATGTAATCGCGACGTCAAAA
GTATCCTGTCGGCGTTGAGTACATGTCGCGGCTTCCTTAATCGCCTTCGA
GAGGAATACCAATTCAAAGGATTTGCCGTCACGCTTACGAAGTCCTTACT
ACATCGAGATATTGGCTGTGGCTTTGGAATTCCCTTAACCCCTAATTTTT
TGATGTGGGAGCGTATCGACTTCCTGCCTACAATCAATTCCTGCTTGGGT
ATGTTTTTCCCCTTTTGCGTGTCCGGCTGGATTAGTTTTAGTTACCCGGC
TGATTTAGTCTACCGGTTCCTGGCGCATTTTCTTCCCGTCCTGCCGCTTG
GTCCGCAGGCGTCCATGGTTCTTTCCTCGACTGGAAAGCATCAGAGCTAT
ACGAAAATGATGACCGGGGATCAAAGAAATTGTTCTGTAGACCACTATGG
AGGTGGCACCTTTGGAGAAAGCTCCACATCCGATACGTCGGCAGGCTCCG
GACCTCCCTCTGCCTCTGCCTTCGCTCCAGGTATGGTAGTGACACGCAGC
CGCCCGAAGCTAAAGAAGCGGGCTAGTGTGGAGCGGGTGGGTTTCAGTGT
GAGCTGTCGCTATACGCGGGCAGCAGGTCCTCATTTTCGAGTAACTCCAT
GGCTCTTCTTTCTTCCGGGAAAGCAACTTGTGGCTCACCTAATCGAGAGC
ATCCTATGGCTTATGACATATGTTTGGTGGGTCATTAAGGCATCACACTT
GCCTTATCGACTTCTTAACCATCGAGAAAGTGCGGCCGGAATCATATCCT
CTACCCAACAACCAAGCACCGTTAATTCCACCGAGAACGACGCTTTTTCA
AGCAGGAAGAGGGATGGTCGGCGTTTTAAAAGATGGGTCTCCAAAAAACA
TGCTGGAATAGGATATAGCATGAATTTCTTCCGTGGGGGACTAGGGGCAT
CACTCATCATGTCTATCAGCCCTTTCTTCCTCAAGCTTCCCCCGACCAGA
TTGTCACACAGTTCACTGAAGCGTCGTCGTCAGGAACGTGATCAGCAGCG
TCAGACGGAGCATAATTTGCATGTAGAGCAGAACCGGTACCAATGA back to topCoding sequence (CDS) from alignment at KK037251.1:382434..384329- >rna9120 ID=rna9120|Name=rna9120|organism=Nannochloropsis gaditana|type=CDS|length=1896bp|location=Sequence derived from alignment at KK037251.1:382434..384329- (Nannochloropsis gaditana)
ATGGAGGCCAATCCTTCTGTACAATGTGGCTGGAGAAGCACAACAAGAAG
GAAGGTCACCTCAACATCTCTCATTGGAACCACACCTCGGAGGATAATGC
CAATCCTGCTGACCGCTCTCAGCCTTTTAAGCCTGACAAAATCCAGCGCA
TCATTATCAGGGTTACTTCTTTCCTCCTCCACGTCAACACCGGACAGAGT
CGAATGGTCTACAAATGGTACAGCCGAAGCTCTTGCACATAACACAGGCT
CTCTTGACGGCGTTTCAGCGCTCCCCTCTTCCACGTCTAGCACTGTTACT
TCCTCTGCCCGCTTCTCAACCCAGCATCGTCTGGTGCAAATCTATGAAAA
TGAAAAGTGGGAGTTTGGCCGTGGGTGGCGGCGCCCAGGCGAAGGCGGTC
GGTTTCGAACATGGACGTACGCTGACGGCGGGAAATCTGTTCCTCCACAA
GAAGCTCAGCTACCCGACGGGTTCCAGTGGGCGTCTTTGGATTGGAAAAT
AGCGCGGGATAATAATACTGATCGAGCTGGATGGTGCTATGCTGACCACT
TTCAGAGCTTCAACAAGCAGCATCGTGTCCATCGCAAGCGGTCGTTCAGC
GACCGCTTCCGGCGACGGCGGTGGGTGCGACTTATGCGTTCGACCCATGC
CAAGCACCTCGACGACAGCCAACAATTGCGTGATATACTATTACCGTTGT
CTGTAGAAGAAGGAGAGCAAGGGGATGGAATTTTGGGGGAAAAGTACGCC
AGTGATAAAAATGGCGATTCCATCAGTTTTACATCCAGCGGACTAGATTT
GCTTGCTATAGCCGATCTGCCCAATATCGAATGTAATCGCGACGTCAAAA
GTATCCTGTCGGCGTTGAGTACATGTCGCGGCTTCCTTAATCGCCTTCGA
GAGGAATACCAATTCAAAGGATTTGCCGTCACGCTTACGAAGTCCTTACT
ACATCGAGATATTGGCTGTGGCTTTGGAATTCCCTTAACCCCTAATTTTT
TGATGTGGGAGCGTATCGACTTCCTGCCTACAATCAATTCCTGCTTGGGT
ATGTTTTTCCCCTTTTGCGTGTCCGGCTGGATTAGTTTTAGTTACCCGGC
TGATTTAGTCTACCGGTTCCTGGCGCATTTTCTTCCCGTCCTGCCGCTTG
GTCCGCAGGCGTCCATGGTTCTTTCCTCGACTGGAAAGCATCAGAGCTAT
ACGAAAATGATGACCGGGGATCAAAGAAATTGTTCTGTAGACCACTATGG
AGGTGGCACCTTTGGAGAAAGCTCCACATCCGATACGTCGGCAGGCTCCG
GACCTCCCTCTGCCTCTGCCTTCGCTCCAGGTATGGTAGTGACACGCAGC
CGCCCGAAGCTAAAGAAGCGGGCTAGTGTGGAGCGGGTGGGTTTCAGTGT
GAGCTGTCGCTATACGCGGGCAGCAGGTCCTCATTTTCGAGTAACTCCAT
GGCTCTTCTTTCTTCCGGGAAAGCAACTTGTGGCTCACCTAATCGAGAGC
ATCCTATGGCTTATGACATATGTTTGGTGGGTCATTAAGGCATCACACTT
GCCTTATCGACTTCTTAACCATCGAGAAAGTGCGGCCGGAATCATATCCT
CTACCCAACAACCAAGCACCGTTAATTCCACCGAGAACGACGCTTTTTCA
AGCAGGAAGAGGGATGGTCGGCGTTTTAAAAGATGGGTCTCCAAAAAACA
TGCTGGAATAGGATATAGCATGAATTTCTTCCGTGGGGGACTAGGGGCAT
CACTCATCATGTCTATCAGCCCTTTCTTCCTCAAGCTTCCCCCGACCAGA
TTGTCACACAGTTCACTGAAGCGTCGTCGTCAGGAACGTGATCAGCAGCG
TCAGACGGAGCATAATTTGCATGTAGAGCAGAACCGGTACCAATGA back to top
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