Naga_100012g55, gene8828 (gene) Nannochloropsis gaditana

Overview
NameNaga_100012g55
Unique Namegene8828
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:344406..348114 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100012g55
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:344406..348114 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
GO:0003723RNA binding
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL074ngnoL074Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL073ngnoL073Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00820NO25G00820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9104rna9104-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9104rna9104Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9104

>rna9104-protein ID=rna9104-protein|Name=rna9104|organism=Nannochloropsis gaditana|type=polypeptide|length=900bp
MSLSQSDEEEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENL
NKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREK
LERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLS
HPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLP
ASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPAASGVPGCSAYVTFAHK
EDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNP
ECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRV
AAPIFPPPRWEEPSGGGGGQAYAMPSTTVTAAGNTRQRPGAARPPANPWN
QQQQQHPHQHQQQELERQQPVHSHGSLSSQAPPAKAGLLATSTAPSRGPT
AHPPTQPARANSISSHKQQQQQSLPPYLVSPSPEMAPGREAATNGPGLGN
AAVTGLPQPPPGIISPPQTPNPGGPSLGVLPFDLAAGGSGGLLWSMEGIV
QHNGDVGISTDSASELGQEGAEGASPPSLTLFGGEDRLGGIEGMPLPGVR
EEGGEARKQVRPPGPPGPKVSEKTIQPPLRGGLLSMLWAGGGSSSSGNSQ
GVLGSGRPFSKAPGLSSSSGESLAEESGSNGGHGALQHPGTHLLFSAFPF
AGTGVGEGQKRSGLLGHAGAGSLDRTETGTIGGARTGRGNKDARREAFTA
TECLVSLLGLDLPDAPSSLSARTRACPPPQQPPVPSSTQAPSSRYSFATE
EGGAGGDKAAEGVTGMTRGYVGAGSGEASGSLYPSLRSGVALLQQLLPNC
SITYGDGAGTPAHTAGALSSSSGTPSGNSGHVTNSGADKDGRGQGLRPVF
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Synonyms
Publications