NO25G00820, NO25G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00820 vs. NCBI_GenBank
Match: EWM21601.1 (ccr4-not transcription complex subunit [Nannochloropsis gaditana]) HSP 1 Score: 416.4 bits (1069), Expect = 2.300e-112 Identity = 273/404 (67.57%), Postives = 291/404 (72.03%), Query Frame = 0 Query: 1 MSMSQSDXXXXXEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSG-----ISPTTGL--PIHS-----------------------TTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQAWQVIMPGSTPGTHVLVGQGGPSGTGKRVAHPVFPPPRWEEPLSDPSTGGAGGAXXXXXTAAGTTKPKPHLTRPPANPWQQ 375 MS+SQSD XXXEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLN+LCPACRTPY DDPH FSPVD DEI+KKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +SP+ GL P+H +TLRNIRVVQRNLAYVLGLP SLASEETLR+ EYFGQYGKIVKVAVTRPA + GC AYVTFAHKEDARACIQALDNFVLP S + + RPIRASFGTTKYCNTFLR+VPCNNPECLFLHE EDDSEGWTRE+A AWQ MPGSTPG V+VGQGGPSGTG+RVA P+F P XXXXX + +P RPPANPW Q Sbjct: 1 MSLSQSDEEXXXEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYLLSPSNGLSHPLHHPLSMALXXXXXXXXXXXXXXHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPAASGV-PGCSAYVTFAHKEDARACIQALDNFVLPVS-EGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIF-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRPGAARPPANPWNQ 401
BLAST of NO25G00820 vs. NCBI_GenBank
Match: GAX23216.1 (CCR4-NOT transcription complex subunit 4 [Fistulifera solaris]) HSP 1 Score: 251.5 bits (641), Expect = 9.900e-63 Identity = 147/381 (38.58%), Postives = 195/381 (51.18%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGISPTTG----LPIHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQAWQVIMPGSTPGTHVL-----------------------VGQGGPSGTGKRVAHPVFPPPRWEEP------LSDPSTGGAGGAXXXXXTAAGTTKPKP 363 CPLCCE LD++DR F+PC C YQ+C +CW+ I+E+ + LCPACRTPY +DPH FS VD+++++K + +A+ + G P+ I G + + + L N+RV++RNL Y +GLP S+ASE+ LRK EYFGQYGKI K+ + R A+ G A AYVTF HKED ACI ALD F L +R IRAS+GT+KYC+ F++ V CNNPEC +LHE + +T++E QA V T G VL VG GGPSGTG+ + PVFPPP ++E L P +GG A AGT P Sbjct: 8 CPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRESESGLCPACRTPYGEDPHQFSAVDVEDVLK----------------------------ANKARDAALKRQKQQEGGMLSASQHDGVPNSIVTEDGSNVAMEVPKDRSQLANMRVIRRNLVYAVGLPASIASEDVLRKPEYFGQYGKIAKIVINR--AISGEPGRRASASAYVTFVHKEDTLACILALDGFYL---------DNRNIRASYGTSKYCSAFIKSVRCNNPECTYLHEMGAAEDTFTKQEIQAGYV-----TSGRDVLARQQQIVSEQLRLNATSAVPRKRVGGGGPSGTGRASSSPVFPPPEFDEAPKPNPVLLPPPSGGVARA-----ATAGTFSLNP 339
BLAST of NO25G00820 vs. NCBI_GenBank
Match: GAX10407.1 (CCR4-NOT transcription complex subunit 4 [Fistulifera solaris]) HSP 1 Score: 230.3 bits (586), Expect = 2.400e-56 Identity = 121/302 (40.07%), Postives = 166/302 (54.97%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGIS----PTTGLPIHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQAWQVIMPGSTPGTHVLVGQ 313 CPLCCE LD++DR F+PC C YQ+C +CW+ I+E+ + LCPACRTPY +DPH FS VD+++++K + +A+ + G P+ ++ + + + L N+RV++RNL Y +GLP S+ASE+ LRK EYFGQYGKI K+ + R A+ G A AYVTF HKED ACI ALD F L +R IRAS+GT+KYC+ F++ V CNNPEC +LHE + +T++E QA V T G VL Q Sbjct: 8 CPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRESESGLCPACRTPYGEDPHQFSAVDVEDVLK----------------------------ANKARDAALKRQKQQEGGMLSASQHEGLPNSVANEDVSNVTMEVPKDRSQLANMRVIRRNLVYAVGLPASIASEDVLRKPEYFGQYGKIAKIVINR--AISGDAGRRASASAYVTFVHKEDTLACILALDGFYL---------DNRNIRASYGTSKYCSAFIKSVRCNNPECTYLHEMGATEDTFTKQEIQAGYV-----TSGRDVLARQ 265
BLAST of NO25G00820 vs. NCBI_GenBank
Match: EJK64137.1 (hypothetical protein THAOC_15160 [Thalassiosira oceanica]) HSP 1 Score: 218.4 bits (555), Expect = 9.300e-53 Identity = 177/377 (46.95%), Postives = 218/377 (57.82%), Query Frame = 0 Query: 13 EHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMK-----------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYP---------------------------HKAATAAGYGGQPS-----GI-------SPTTGLP-IHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQAWQV------------IMPGSTP------GTHVLVGQGGPSGTGK 321 E CPLCCE LDI+D+NFFPC C YQ+C +CW+ I+E + LCPACRTPY DDPH FS VD++E+++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YP ++ G G PS G P+ G P +TL ++RV++RNL Y +GLPP++A+EE LR+ EYFGQYGKI KV V R G +SA AYVTF+HKEDA ACI ALD F R +RAS+GT+KYC+ F++ V CNNP+C +LH + + +T++E QA V IM G VG GGPSGTG+ Sbjct: 8 EICPLCCEELDISDQNFFPCKCGYQVCMWCWHRIRETESGLCPACRTPYGDDPHEFSAVDMEEVVRANKEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSGGLGSGPSLGQFDGADLVAALGGPSRGPPEPPKDRSTLASMRVIRRNLVYAVGLPPNVATEENLRRPEYFGQYGKIAKVVVNRNHNPGDPRRSSAS--AYVTFSHKEDALACILALDGFY---------HDGRNVRASYGTSKYCSAFIKSVRCNNPDCTYLHHMGEKEDTFTKQEIQAGYVTSGRDVLARQKQIMAQQAAAHFGGVGAKTRVGGGGPSGTGR 373
BLAST of NO25G00820 vs. NCBI_GenBank
Match: CBJ29708.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 215.3 bits (547), Expect = 7.900e-52 Identity = 159/313 (50.80%), Postives = 192/313 (61.34%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGISPTTGLPIHSTTT--TLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQAWQVIMPGSTPGTHVLVGQGGPSGTGKRVAHP 326 CPLCCE +D++D+NF PCPC Y++C +CW+ IKEN LCPACR+ YADDPH F+ VD +E++K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S L N+RVVQRNL Y GLP L SEE LR+ E FGQYGKI K+A++ A S A++TFAHKEDA ACI A D F L R +R++FGTTKYC T+LR PC+NP+CL+LHE D+ + +T+EE Q ++ P GTG R P Sbjct: 18 CPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKIAISVSQA---SEPRPGNFSAHITFAHKEDALACILATDGFWL---------EGRQLRSNFGTTKYCATYLRNSPCSNPDCLYLHELGDEEDRFTKEEIQQRSLLAPXXXXXXXXXXXXXXXXGTGMRCNSP 318
BLAST of NO25G00820 vs. NCBI_GenBank
Match: XP_002177943.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50757.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 213.8 bits (543), Expect = 2.300e-51 Identity = 110/282 (39.01%), Postives = 150/282 (53.19%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGISPTTGLPIHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATS-----AGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREE 292 CPLCCE LD++D++F+PCPC YQ+C +CW+ IKE+ + LCPACR+PY +DPH FS VD++ +K L + T L N+RV++RNL Y +GLPPS+A+EETLRK EYFGQYG+I K+ + R + + A AYVTFAHKED ACI ALD VL R +R S+GT+KYC++F++ V CNNPEC +LHE + + +T++E Sbjct: 4 CPLCCEELDLSDQSFYPCPCGYQVCMWCWHRIKESESGLCPACRSPYGEDPHQFSAVDVEAALK--------------------------------------------------------------ANKLKEDADRTLLANMRVIRRNLIYAVGLPPSIANEETLRKPEYFGQYGRIAKMVLNRNNVTASNTVINGEIRRASASAYVTFAHKEDTLACILALDGLVL---------DHRSVRVSYGTSKYCSSFIKSVRCNNPECTYLHEMGAEEDTFTKQE 214
BLAST of NO25G00820 vs. NCBI_GenBank
Match: XP_002288832.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94268.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 209.9 bits (533), Expect = 3.300e-50 Identity = 111/277 (40.07%), Postives = 145/277 (52.35%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGISPTTGLPIHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREE 292 CPLCCE LD++D+ F+PC C YQ+C +CW+ IKE+ + LCPACRTPY DDPH FS + + H+A+ A S P +TL +RV++RNL Y +G+PPS+A+EE LRK EYFGQYGKI K+ + R G SA AYVTF HKED ACI ALD F R IRAS+GT+KYC+ F++ V CNNP+C +LH D + +T++E Sbjct: 1 CPLCCEELDLSDKQFYPCKCGYQVCMWCWHRIKESESGLCPACRTPYGDDPHEFSAIGIH------------------------------------------------HQASDFASLLASNSRGPPEP----PKDRSTLATMRVIRRNLVYAVGMPPSIATEELLRKPEYFGQYGKIAKIVINRNHNPGDPRRASAS--AYVTFVHKEDTLACILALDGFY---------HDGRNIRASYGTSKYCSAFIKSVKCNNPDCTYLHHMGDQEDTFTKQE 214
BLAST of NO25G00820 vs. NCBI_GenBank
Match: XP_024581671.1 (rna recognition motif-containing protein [Plasmopara halstedii] >CEG45302.1 rna recognition motif-containing protein [Plasmopara halstedii]) HSP 1 Score: 208.4 bits (529), Expect = 9.700e-50 Identity = 116/290 (40.00%), Postives = 147/290 (50.69%), Query Frame = 0 Query: 4 SQSDXXXXXEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGISPTTGLPIHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQ 294 + SD + CPLC E LDITD+ F CPC YQ+C +CW+ IK N LCPACR PYA+ +P D DE++++ K T Q + +L+N+RV+QRNL YV+GLP A E+ LR E FGQYGKIVK V + + +A AY+TFAHKEDA CI A+D + L SL +RASFGTTKYCN FLR + CNNPECL+LHE DD + +T+EE Q Sbjct: 38 NMSDYNEEADCCPLCMEELDITDQTFNACPCGYQVCLWCWHQIKNEYNGLCPACRQPYAEISKQKNPPDRDEVVRRTKQRKL--------------------------------------KEKTERRSAAQAKNAT--------VNRKSLQNVRVMQRNLVYVIGLPVQFADEDILRSNECFGQYGKIVKAVVNKSHL--NTDRANATASAYITFAHKEDALCCIVAIDGYYLDGSL---------LRASFGTTKYCNFFLRNMQCNNPECLYLHELGDDDDSFTKEEMQ 270
BLAST of NO25G00820 vs. NCBI_GenBank
Match: OEU09417.1 (hypothetical protein FRACYDRAFT_159768, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 205.3 bits (521), Expect = 8.200e-49 Identity = 108/283 (38.16%), Postives = 145/283 (51.24%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGISPTTGLPIHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQAWQV 298 CPLCCE LDI+DR FFPC C YQ+C +CW+ I+E+ + LCPACRTPY DDPH FS VD++E++K + AA +G + + T L N+RV++RNL Y +GLPP++ASE+ LRK +YFGQY A AYVTF HKED +CI ALD F + R +R+S+GT+KYC+ F++ V CNNPEC +LH + +T++E QA V Sbjct: 2 CPLCCEELDISDRQFFPCKCGYQVCMWCWHRIRESESGLCPACRTPYGDDPHEFSAVDVEEVLK---------------------------------------ANKEKEAAAKEERNLDSLAGGRQVGQMEVPKDRTQLANMRVIRRNLVYAVGLPPNVASEDALRKSDYFGQY---------------------ASASAYVTFVHKEDTLSCILALDGFYM---------DGRNVRSSYGTSKYCSAFIKNVRCNNPECTYLHNMGHIEDTFTKQEIQAGYV 215
BLAST of NO25G00820 vs. NCBI_GenBank
Match: XP_009526103.1 (hypothetical protein PHYSODRAFT_331074 [Phytophthora sojae] >EGZ17045.1 hypothetical protein PHYSODRAFT_331074 [Phytophthora sojae]) HSP 1 Score: 200.3 bits (508), Expect = 2.600e-47 Identity = 121/280 (43.21%), Postives = 156/280 (55.71%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNRLCPACRTPYADDPHNFSPVDLDEIMKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPHKAATAAGYGGQPSGISPTTGLPIHSTTTTLRNIRVVQRNLAYVLGLPPSLASEETLRKGEYFGQYGKIVKVAVTRPAALGGSGATSAGCCAYVTFAHKEDARACIQALDNFVLPPSLAPADSSSRPIRASFGTTKYCNTFLRYVPCNNPECLFLHEAEDDSEGWTREEAQA 295 CPLC E LDITD+ F CPC YQ+C +CW+ IK N LCPACR PYA+ +P+D +E++++ XXXXXXXXXXX K+AT +L+N+RV+QRNL YV+GLP A E+ LR E FGQYGKIVK V + + +A AY+TFA+KEDA CI A+D + L SL +RASFGTTKYCN FLR + CNNP+CL+LHE D+ + +T+EE Q+ Sbjct: 10 CPLCMEELDITDKTFNACPCGYQVCLWCWHQIKNEYNGLCPACRQPYAELSKQKNPLDREEVVRRTKQRXXXXXXXXXXXAQA--------------------------KSATV--------------------NRKSLQNVRVMQRNLVYVIGLPVHFAEEDILRSNECFGQYGKIVKAVVNKSHL--SADRQNATASAYITFANKEDALCCIVAIDGYYLDGSL---------LRASFGTTKYCNFFLRNMQCNNPDCLYLHELGDEDDSFTKEEMQS 232 The following BLAST results are available for this feature:
BLAST of NO25G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00820 ID=NO25G00820|Name=NO25G00820|organism=Nannochloropsis oceanica|type=gene|length=3778bpback to top protein sequence of NO25G00820.1 >NO25G00820.1-protein ID=NO25G00820.1-protein|Name=NO25G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=924bpback to top Synonyms
Publications
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