EWM21637.1, cds9060 (CDS) Nannochloropsis gaditana

Overview
NameEWM21637.1
Unique Namecds9060
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:310724..312019 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21637.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g41.1969.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:310724..312019 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|585101892|gb|EWM21637.1| (hypothetical protein Naga_100012g41 [Nannochloropsis gaditana])

HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0
Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0
Query:    1 MRRSLARSCPSPPSQHQLDRGSRRPSIMRTARSCLTLAMSLVSLVLTTTPAMAFFNAGVCRQFGTLQPFRPPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431
            MRRSLARSCPSPPSQHQLDRGSRRPSIMRTARSCLTLAMSLVSLVLTTTPAMAFFNAGVCRQFGTLQPFRPPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES
Sbjct:    1 MRRSLARSCPSPPSQHQLDRGSRRPSIMRTARSCLTLAMSLVSLVLTTTPAMAFFNAGVCRQFGTLQPFRPPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|873221459|emb|CEM33345.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 133.265 bits (334), Expect = 5.199e-31
Identity = 111/413 (26.88%), Postives = 191/413 (46.25%), Query Frame = 0
Query:   45 VLTTTPAMAF----FNAGVCRQFGTLQPFR--PPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLE-QELKAVQASRPKPVVTEEKPAGPTP-----------------RYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDL--KWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431
            +L+   A+AF    F   V R    ++  R  PP+  L  S+  A V  +  L+ AAKLR+EA  +E Q+ K  +A R +      K A   P                 R L+   + +  +  + S+    T L +LKE G +  + S +   +    +  ++ +TG     ++S   + D   +  +G ++ ++ LA+    F+GG  G L  YLF  +PI  + IGS+ PGV+      V N  DG   ER+  H+A+ FL GYLLG P   V    E  T+ +++Y++ D +              + R+   +  +    V+AI+G   E ++Y    D   D  Y+  LM   +P L  GQ+  +  +S+L A+++L  ++  ++ LA  M   A ++E + V+E+
Sbjct:   11 ILSIYDALAFQPSTFTLSVPRPHLPVESIRRRPPRHHLYASSDDADVQKL--LEEAAKLREEASAMEVQKAKDDEADRQRQEAEAAKQAAMKPADAPQTNAAAAPPPAEARLLT-SPVASVPKLPLDSAVACATKLDELKEQGVIGYWNSEARPSYYNVESYTWKASTGCDDNAIQSKSGETDFFQRLFVGTLIVSTLLAIGSSQFIGGNLGALFTYLFAALPIVVVAIGSINPGVLLGLYTNVQNAADGSFKERRRWHEASHFLVGYLLGYPPRRVVKAPE--TSLVEFYESRDDS-------------QDRRQPLERSTLEPLCVVAISGISGELLKYKTAKDTDVDINYIQNLMKRTQPQLSGGQQTSIPRWSSLAAYQILEKHQPVVDELAGAMGGGADISECIRVVEN 405          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|1072230469|gb|OEU15202.1| (hypothetical protein FRACYDRAFT_218197 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 106.686 bits (265), Expect = 1.065e-21
Identity = 85/301 (28.24%), Postives = 148/301 (49.17%), Query Frame = 0
Query:  154 TALKQLKESGALTKFESGSAKG----FRRY--SAEQFEQATGFPPQDVESGG---TQDDLKWALGAVMAASSLAVVGGGFLGGFA---------GTLLVYLFLLIPITFIGIGSVAPGVISVFVVLV-SNLLDGKAA--ERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPS---LRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVME 430
            +AL +L+  G+++ ++S + +      R +  S    E   G   + +  G    + DD K+         +L V GG  + G A         G    Y F L+PI ++G+GS  P  I+  +VL+  +  DG  +  ER   H+AA FL GYL GLP+ + +T  +     ++++ + DGN     A           ++   ++I    V+A++G+VAE M +GK   +      L+ L ++ R S   L A ++ DL  + ALTA++LL  NK +L+ L +  + + S+A+ VA++E
Sbjct:  125 SALGELRNEGSISIYKSATEENGSGDLRSFPVSLSMLENRCGLTSEKLGIGEEIVSLDDFKYG--------TLWVTGGASVAGIASLALLPENVGATFCYFFALLPILWLGVGSTVPAAIAGAIVLIRGDDDDGSVSKTERVCRHEAAHFLCGYLCGLPVANYETSED--IPRVEFHYSQDGNENIATAN----------RELKSDEINALTVVALSGAVAEAMSFGKA--KGGSNADLMELQNIFRKSEIFLGAEKQQDLTRWGALTAYRLLNTNKTQLDALVKAFSEQKSVADCVAIIE 403          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|551668904|ref|XP_005837211.1| (hypothetical protein GUITHDRAFT_151256 [Guillardia theta CCMP2712] >gi|428181367|gb|EKX50231.1| hypothetical protein GUITHDRAFT_151256 [Guillardia theta CCMP2712])

HSP 1 Score: 103.219 bits (256), Expect = 1.641e-20
Identity = 96/332 (28.92%), Postives = 153/332 (46.08%), Query Frame = 0
Query:  121 TEEKPAGPTPRYLSFEQ----LKAEVEQAMASSA--VVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVE-----SGGTQ-DDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLL---IPITFIGIGSVAPGVISVFVVLVSNLLDG-KAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADF-----LYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431
            T+ K      R LSFE+    +K   ++A   SA  V DT  ++LK  G L K+ S   K  R  S  + ++       D++     SGG Q +DLK       A+S++  V G  +GG  G  + +L  L   IP+  +G+GSVAP +I   +  +    D     ER+  H+AA  L GY+ GLPIE  + +        K+YD  +GN  D+ A   A P       F +E++   AV+ ++G + E   Y +    Q D      +Y  A  + +R +     + +   + A+ A  LL  N     RL +++   AS+ E +A +E+
Sbjct:   95 TDAKEENAGNRALSFEETLKEIKEPCKKAWEGSATDVYDT-FERLKSQGVLKKWNSMPVKS-RAVSQNELKRMLK-TELDLDTVLGISGGVQTEDLKKLTVGAFASSAIIGVLGTAIGGETGGFVYWLTFLGASIPLVLVGVGSVAPSLIGGVISGLQWQFDKTNTMERRIRHEAAHILAGYMCGLPIEGYEVEP---MPMCKFYDRREGNIDDVEAWKKARP-------FNEEEVDKLAVVCLSGVMGELSLYERAAGGQQDLEQLQEVYFRAESEKLRNNR---VREETTRWGAMKARTLLEENNDSFMRLCKQLEKGASIEECIASIEA 410          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|397633736|gb|EJK71112.1| (hypothetical protein THAOC_07480 [Thalassiosira oceanica])

HSP 1 Score: 102.064 bits (253), Expect = 4.040e-20
Identity = 64/205 (31.22%), Postives = 104/205 (50.73%), Query Frame = 0
Query:  230 GTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAE----RKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVME 430
            G  + YLF LIP+ FIGIGS +PG+I+    +  +  D + AE    R   H+A  FL G+L GLPI+S   + + G   ++++                G G E       E+I   +V+A++GSVAE + +      + D L L       +  + A ++ DL  + ALT++ LL +N  K E+L +    + SL++ VA++E
Sbjct:  214 GATVTYLFALIPVGFIGIGSTSPGIIAA--AIKGSRGDSEDAEQQRERICRHEAGHFLCGWLCGLPIKSYNVNDDTGVACVEFH--------------TGGAGQE----LSDEEIASLSVVAMSGSVAEILNFDVAKGGENDLLELQNCFRKSKEFIGAAKQQDLTRWGALTSYNLLKSNAQKYEKLVDAFKQRKSLSDCVALLE 398          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|298706984|emb|CBJ34234.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 90.1225 bits (222), Expect = 7.137e-18
Identity = 55/115 (47.83%), Postives = 71/115 (61.74%), Query Frame = 0
Query:  202 DDLKWALGAVMAASSLAVVGGGFLGGF-AGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGN 315
            DDLK+ALG V   S  A VG G   G   G    Y F L+PI F+GIGS APGVI+  +  V         ER+  H+AA FL+GYL GLPI+S K  A+GGTT +++YD+ +G+
Sbjct:    2 DDLKYALGFVCIFSFAAAVGVGAAIGGNVGASFTYFFALLPIVFLGIGSTAPGVITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYK--ADGGTTLVEFYDSAEGD 114          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|1210528625|dbj|GAX12822.1| (hypothetical protein FisN_15Hh301 [Fistulifera solaris])

HSP 1 Score: 94.3597 bits (233), Expect = 1.123e-17
Identity = 101/359 (28.13%), Postives = 145/359 (40.39%), Query Frame = 0
Query:   92 DRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGF--------RRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGG-GFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLV-------SNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPS---LRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431
            + AAK RQEAE+L QEL            T  KPA P               +      V+D A     E     KF S + + F         R +    +       +DV      DD K+A   V    +L  +    FL    G  + YL  LIP+ F+ +GS AP  I+  +  +        N++   A ER   H+AA F  GY  GLP++               Y   DG   D+  + +  PG E R ++    +    V A++G + E + +G VI   A    L     + R S   L A  + DL  + ALTA  LL  NK   E++ + M  KASL E + ++ES
Sbjct:   44 EAAAKARQEAERLRQELGQS--------TTTSKPAAP---------------KIAPKPTVMDVAFA---EDQTFDKFGSANLRTFPVGLPMLQSRLNITAAQLGLAESDEDV----NLDDFKYATLFVTGGCTLTGIASLAFLPPNVGATVCYLVALIPVLFLAVGSTAPAAIAGAIKTIKGQGGDRDNIIS--AQERMLRHEAAHFCCGYWCGLPVQE--------------YRVEDG---DMCVEFSVAPGTE-RGEYTSTQVAALTVTALSGVLGEALTFGSVIPGSATQDLLQLEQQVFRRSENFLGAVAQQDLTRWGALTAGLLLRQNKEAYEKIVQAMERKASLRECIELLES 352          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|224010159|ref|XP_002294037.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970054|gb|EED88392.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 90.1225 bits (222), Expect = 2.664e-17
Identity = 65/207 (31.40%), Postives = 109/207 (52.66%), Query Frame = 0
Query:  230 GTLLVYLFLLIPITFIGIGSVAPGVISVFVVLV--SNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPS---LRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431
            G  + YL  L+PI FIG+GSVAPG+I+  +      +  + +  ER   H+A  FL GYL GLP+++ +     G   ++++   DGN  +L                 ++D+   +V+A++GSVAE + Y K    + D   L+ L +  R S   + A ++ DL  + ALT+++LL  N    E+L +    K SL+E V+++E+
Sbjct:   20 GATVCYLVALVPIAFIGVGSVAPGIIAGVITSARGKSEDEERRRERVCRHEAGHFLCGYLCGLPVKNYEIVDSTGVACVEFH--TDGNGGELT----------------EDDVAALSVVAMSGSVAEIIAYDKATGGEND---LIELQNCFRKSKEFIGAARQQDLTRWGALTSYELLRKNSEVYEKLVKAFGEKKSLSECVSIIEA 205          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|676392949|ref|XP_009039752.1| (hypothetical protein AURANDRAFT_72206 [Aureococcus anophagefferens] >gi|323449735|gb|EGB05621.1| hypothetical protein AURANDRAFT_72206 [Aureococcus anophagefferens])

HSP 1 Score: 93.9745 bits (232), Expect = 8.261e-17
Identity = 61/194 (31.44%), Postives = 93/194 (47.94%), Query Frame = 0
Query:  217 LAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLE 410
            LAV  G  +GG  G    Y+F ++PI F+G+GS +PGVI + V   +       A R+  H+AA  + GY LGLP+ +   DA      +++YD               GPGP+ R     +D    A +A+AG+VAE   +G+    Q DF  L  L D V P L   ++        L A+ +L  ++ + +
Sbjct:  864 LAVGSGALIGGNLGAAFTYIFAVLPIIFLGVGSSSPGVI-LAVYGATKQAKENTAPRRRRHEAAHLVAGYALGLPVAAYADDA------VEFYD---------------GPGPKSR-----DDAERLACVALAGAVAECDAFGEAKGAQDDFANLQRLFDRVEPRLTPAEQQAATRRGVLNAYSVLFGSRARRD 1030          
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|308813674|ref|XP_003084143.1| (unnamed protein product [Ostreococcus tauri] >gi|116056026|emb|CAL58559.1| unnamed product [Ostreococcus tauri] >gi|1199290056|gb|OUS45157.1| hypothetical protein BE221DRAFT_193343 [Ostreococcus tauri])

HSP 1 Score: 91.2781 bits (225), Expect = 1.042e-16
Identity = 64/240 (26.67%), Postives = 111/240 (46.25%), Query Frame = 0
Query:  192 PQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431
            P+ +      +DLK  +   +  S  AVV G  L G  G    YL   IPI  + +GS APG++ V    ++ + D +   R   H+A  FL GY  G+P+ S     +       + + M+   +    Q A         K    ++L  AV+++AG  AE ME+ +V+ + AD   L  +++ V P L    + ++  ++   A  +L+ N+   + L EKM   AS+ + +  +E+
Sbjct:  113 PEQIAKPSDANDLKLIVTVTLTCSLAAVVVGATLPGDIGAFGAYLLGGIPIVVLAVGSTAPGLLRVATDRLARV-DPEYRRRIARHEAGHFLVGYACGVPVGSYNLGIDES-----HVNFMESKLERKIFQGA---------KLSSSEVLPLAVISMAGVAAEAMEFEEVMGQSADLFDLQRILNRVDPKLNDASQQEITRWAVFQAATILSENRAAFDALTEKMQEGASVVDCLQTIEA 337          
The following BLAST results are available for this feature:
BLAST of EWM21637.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101892|gb|EWM21637.1|0.000e+0100.00hypothetical protein Naga_100012g41 [Nannochlorops... [more]
gi|873221459|emb|CEM33345.1|5.199e-3126.88unnamed protein product [Vitrella brassicaformis C... [more]
gi|1072230469|gb|OEU15202.1|1.065e-2128.24hypothetical protein FRACYDRAFT_218197 [Fragilario... [more]
gi|551668904|ref|XP_005837211.1|1.641e-2028.92hypothetical protein GUITHDRAFT_151256 [Guillardia... [more]
gi|397633736|gb|EJK71112.1|4.040e-2031.22hypothetical protein THAOC_07480 [Thalassiosira oc... [more]
gi|298706984|emb|CBJ34234.1|7.137e-1847.83conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210528625|dbj|GAX12822.1|1.123e-1728.13hypothetical protein FisN_15Hh301 [Fistulifera sol... [more]
gi|224010159|ref|XP_002294037.1|2.664e-1731.40predicted protein, partial [Thalassiosira pseudona... [more]
gi|676392949|ref|XP_009039752.1|8.261e-1731.44hypothetical protein AURANDRAFT_72206 [Aureococcus... [more]
gi|308813674|ref|XP_003084143.1|1.042e-1626.67unnamed protein product [Ostreococcus tauri] >gi|1... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9090rna9090Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications