EWM21613.1, cds9053 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|585101868|gb|EWM21613.1| (lipase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1283.47 bits (3320), Expect = 0.000e+0 Identity = 617/617 (100.00%), Postives = 617/617 (100.00%), Query Frame = 0 Query: 1 MVNIAKTSVLLLGTFSAVAIASGEPPALLRPQGRLQQEDSTQESHPGIEFPESLARSNYGDSQPRSAYESVSVGDDGSIRPLYTNANADTHGVQRPTHDDSASKSLTQEDVSLIFELASGNASIDSNLQGSGIGDKAITATSLVMEHFVAAFENYRRHLSGISKLFPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSVRIQTTQEYPQNPDGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFYAYATDTAEDKELLDPLAPGWGPQTVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYFEGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYFQEQREVQQQGIRAWIGSLWKKGGKGGKGMALRDGEICRRTEADLYADLDLTRDPRIRGSIGQG 617 MVNIAKTSVLLLGTFSAVAIASGEPPALLRPQGRLQQEDSTQESHPGIEFPESLARSNYGDSQPRSAYESVSVGDDGSIRPLYTNANADTHGVQRPTHDDSASKSLTQEDVSLIFELASGNASIDSNLQGSGIGDKAITATSLVMEHFVAAFENYRRHLSGISKLFPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSVRIQTTQEYPQNPDGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFYAYATDTAEDKELLDPLAPGWGPQTVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYFEGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYFQEQREVQQQGIRAWIGSLWKKGGKGGKGMALRDGEICRRTEADLYADLDLTRDPRIRGSIGQG Sbjct: 1 MVNIAKTSVLLLGTFSAVAIASGEPPALLRPQGRLQQEDSTQESHPGIEFPESLARSNYGDSQPRSAYESVSVGDDGSIRPLYTNANADTHGVQRPTHDDSASKSLTQEDVSLIFELASGNASIDSNLQGSGIGDKAITATSLVMEHFVAAFENYRRHLSGISKLFPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSVRIQTTQEYPQNPDGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFYAYATDTAEDKELLDPLAPGWGPQTVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYFEGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYFQEQREVQQQGIRAWIGSLWKKGGKGGKGMALRDGEICRRTEADLYADLDLTRDPRIRGSIGQG 617
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|585109778|gb|EWM27512.1| (lipase class 3 [Nannochloropsis gaditana]) HSP 1 Score: 147.902 bits (372), Expect = 7.874e-35 Identity = 107/401 (26.68%), Postives = 182/401 (45.39%), Query Frame = 0 Query: 182 CPIVDFVETIVAVNLPSVRIQ--------------TTQEYPQNPDGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFY--AYATDTAEDKELLDPLAPGWGPQ---TVHFRNATSVGGQ---WRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYFEGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPG-KMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNM--LDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYFQEQ 557 CP+ D + + + +R+ + P NPDG LP+ +D + V +TI AE+ +YYY YR+ Y A+ + ++ + +L L W + V + T++ + R+SP +V K ++V +RGT++ +E+ Y + + + + F G+ H G + +F + L ++++SR P V + GHS+G IA M+G L E + + K V+V+ G GD +F + + +N R++ +LG G +P MYT GD+ AQ P P C ++G + Y P V YP + N W D N+ + P+ V+ SH C Y CW + +GD ++RCYF + Sbjct: 87 CPVFDNLNKVASFGCNFIRLNKDVLTAFWVDFSKTASTTRPMNPDGLLPQILRDHRPDPPRQVGRETIHAERPTYYYCYRLILLMYSIAFEYERSDMQSILPKLVEDWDRERWYMVDYLKQTNINWKNIPHRQSPIAVSMMKGDRMMVVIRGTIWTEEWCKDFQYRWADDEDGL--FPGRTHEGMYSVFVDFYKGLEEEVESRQPAHVLVTGHSLGAGIANMIGLRL------------ENSLQHKP-RVDVIGFGGPNTGDTDFADIYRRTVNSRHLIFLGHG------SSPNPNMYTAGDITAQYTCEPYPGCDVLATG--------PFGKTYKYVRPHNQVPFYPEDMPNPKTWNDIANVRRIIPSTKRVIASHICSYICWTSLAVGDLDSRCYFASE 458
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|585109275|gb|EWM27098.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 136.732 bits (343), Expect = 1.045e-30 Identity = 102/365 (27.95%), Postives = 168/365 (46.03%), Query Frame = 0 Query: 208 PQNPDGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFYAYA--------TDTAEDKELLDPLAPGWGPQ---TVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPY-FEGKVHSGAFQLFKEMLPPLLQD-IKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKMYTMGDVVAQAP-----GVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYF 554 P +P LP+P + L V + + AEK +YY++YR YA TD+A++ L L P W Q T+ + + G ++PF+V +D +LV +RGT+Y E++ + Y+ +P ET Y G VH+G F +FK++ L+ D IK ++P+KVT GHS+GG + +L Y + + +VE+++ GA GD F + R++ + G G + G Y +GD ++Q P PL T M S N + G + + Y +V P ++N W ++++ R + V +H C Y C+ +GD +C F Sbjct: 147 PVDPLRELPQPLEVLSMPLPALVPTEKVEAEKPTYYFLYRAIQNLYAAVGANARSRGTDSAQEPMLNLALPPAWTNQREYTLRWTGSLVAGVLQPQAPFAVSFTRDKEMLVVVRGTIYSAEWQRNFQYQHADPTETAAYRMPGGVHAGFFAVFKDLAEALVDDEIKRQAPSKVTFTGHSLGGSVGALLAFYTTHVLPR--------------TQVELVSFGAPNVGDATFSSAFNARVRNRHLAFSGVG-------SEGDSYFIGDWISQVPCGAVTTCPLLTEMSSVDLNGSPSGQRQANESYSYTALGGSVPFTPAQMQNGRTWALRSDVAG-FRYSPVAAHTCSYMCFTAPSVGDAYDQCVF 489
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|553188297|ref|XP_005854770.1| (lipase-related protein [Nannochloropsis gaditana CCMP526] >gi|422294286|gb|EKU21586.1| lipase-related protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 111.309 bits (277), Expect = 3.844e-22 Identity = 112/440 (25.45%), Postives = 177/440 (40.23%), Query Frame = 0 Query: 160 SGISKLFPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSVRIQTTQEYPQNP--DGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFYAYATDTAEDKELLDPLAPGWGPQTVHFRNATSVGGQW--------RESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYF--EGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEE----GAERGKGME-------VEVLTVGAYAP--------------GDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKM-YTMGDVVAQAP--GVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARM---AVVLSHKCPYTCWLTDGMGDP--NTRCYF 554 S I +L P VI FL+ VCP+V +E PS+ +P + LP+P +DE+ AE+ + Y+ Y M + D +E A G QT + W + PF+V K+ H++V MRG+ +++ A+ Y F NE+ G+VH G + + P L +++ P +++L G SVGG ++ + GAYL R A K E G +G E V+ L + + P GD F + +N R+ +LG G G M + +GD V Q P P+P C+ S+ ++ H + I P + N W ++ N L ++ +V +H C Y CW T G+ P ++CYF Sbjct: 101 SDIKRLNPTCAVIGFLLRTVPVCPVVRQLEKYFLGTPPSLNQFFANTLVPSPEMNAYLPKPLAVYPSMLPDIIDEEVADAERHTIYWYYAMVALAWRNMADILRPEEAR---AAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCA-NESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGST-ETYMYSYHGG-----------LIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCWATRGLPPPYEGSKCYF 524
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|585108504|gb|EWM26457.1| (class 3 [Nannochloropsis gaditana]) HSP 1 Score: 103.99 bits (258), Expect = 7.606e-20 Identity = 112/422 (26.54%), Postives = 171/422 (40.52%), Query Frame = 0 Query: 164 KLFPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSV---------RIQTTQEYPQNPDGTLPRPWKDLKGCDAWFV-DEDTIRAEKASYYYVYRMYDTFYAYA-----TDTAEDKELLDPLAP-GWGPQTVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNE---TVPYFEGKVHSGAFQLFKEMLPPLLQDIK-----SRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVR--NIRYLGEGWIEDGLDAPGKMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWR--DKTNMLDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYFQEQ 557 KLFP G E ++ CP+V +E +N S+ +T +E Q+ + +LP D+ + + D+ I E+ + Y+ YR Y Y TA K P P G+ Q + F TS G ++ P K H++V MRGT+++ +E+ P++ T G++H G F E L L Q I+ + + ++ GHS+G ++ L A R + VEV GA GD F E+ +N+R + Y+G G + AP + +GD++ QA + P + N + K Y VA Y T + NT W D+ LD + A H C Y CW G+ DP RCYF E Sbjct: 109 KLFPSCGFAEPIIDAPGYCPLVRILERGADMNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAKP--PPYVPRGYHSQRLIF---TSSNGT-KDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKG---FFSEALT-LTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPIL--------------ALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTS---APVP-FGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIK------YEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSAC---HGCSYLCWSVQGLDDPEDRCYFAEH 493
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|553180277|ref|XP_005853377.1| (class 3 [Nannochloropsis gaditana CCMP526] >gi|553191614|ref|XP_005855413.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422293644|gb|EKU20944.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422295682|gb|EKU22981.1| class 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 90.1225 bits (222), Expect = 8.265e-16 Identity = 96/372 (25.81%), Postives = 152/372 (40.86%), Query Frame = 0 Query: 202 QTTQEYPQNPDGTLPRPWKDLKGCDAWFV-DEDTIRAEKASYYYVYRMYDTFYAYATDTAE-DKELLDPLAPGWGPQTVHFRNA--TSVGGQWRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNE---TVPYFEGKVHSGAFQLFKEMLPPLLQDIK-----SRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVR--NIRYLGEGWIEDGLDAPGKMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWR--DKTNMLDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYFQEQ 557 +T +E Q+ + +LP D+ + + D+ I E+ + Y+ YR Y Y + +P P + P+ H + TS G ++ P K H++V MRGT+++ +E+ P++ T G++H G F E L L Q I+ + + ++ GHS+G ++ L A R + VEV GA GD F E+ +N+R + Y+G G + AP + +GD++ QA + P + N + K Y VA Y T + NT W D+ LD + A H C Y CW G+ DP RCYF E Sbjct: 18 ETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATANP--PPYVPRGYHSQRLIFTSSNGT-KDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKG---FFSEALT-LTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPIL--------------ALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTS---APVP-FGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIK------YEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSAC---HGCSYLCWSVQGLDDPEDRCYFAEH 355
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|585105507|gb|EWM24145.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 82.4185 bits (202), Expect = 4.442e-13 Identity = 94/415 (22.65%), Postives = 152/415 (36.63%), Query Frame = 0 Query: 166 FPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSVRIQTTQEYPQNPDGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFYAYATDTAEDKELLDPLAPGWGPQTVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMY----QDEYRASSIYEFTEPNETVPYFEGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKMYTMGDVVAQAP----GVPLPTCMHSSSGNETLWGVHK--DAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARM------AVVLSHKCPYTCWLTDGMGDPNTRCYFQEQREVQQQG 564 +P+ L VCP++ I+ + P T++ + NP+G LP + L G D I E VY + D PG G +W P ++ ++V RGTM+ + +++ S +P G+VH G S+GG I+ + A+L VK + ++++ +T G+ GDR F + +N+R Y+G G + + + G Y MGDV+ Q P + +P C E++ + + F + M V Y + ++NT W K N AR + H C Y CW ++ GD +TRCYF Q VQ+ G Sbjct: 48 WPFCSPAGLLYESGLVCPVMQVSAMILMRSPPDFEKLTSEHHCPNPEGALPMELEALNGKDGQGSMPMMIPPELWENQNVYFLKD--------------------PG--------------GWKW---PIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLP---GRVHYGQCGW------------------------ASLGGAISQVAAAFL---------VKHH-----RHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQR-GLNYGMGDVITQMPLACYNLSIPFC-------ESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQ-GVQEAG 375
BLAST of EWM21613.1 vs. NCBI_GenBank
Match: gi|585110050|gb|EWM27768.1| (lipase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 79.337 bits (194), Expect = 1.835e-12 Identity = 75/283 (26.50%), Postives = 120/283 (42.40%), Query Frame = 0 Query: 291 RESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYF--EGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEE----GAERGKGME-------VEVLTVGAYAP--------------GDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKM-YTMGDVVAQAP--GVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARM---AVVLSHKCPYTCW 540 + PF+V K+ H++V MRG+ +++ A+ Y F NE+ G+VH G + + P L +++ P +++L G SVGG ++ + GAYL R A K E G +G E V+ L + + P GD F + +N R+ +LG G G M + +GD V Q P P+P C+ S+ ET + Y + I P + N W ++ N L ++ +V +H C Y CW Sbjct: 50 QSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCA-NESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGST--ET----------YMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW 319 The following BLAST results are available for this feature:
BLAST of EWM21613.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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