EWM21604.1, cds9049 (CDS) Nannochloropsis gaditana

Overview
NameEWM21604.1
Unique Namecds9049
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:285619..286052 +
Alignment locationKK037251.1:286285..286747 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21604.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g31.1936.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:285619..286052 +
KK037251.1supercontigKK037251.1:286285..286747 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|585101859|gb|EWM21604.1| (hypothetical protein Naga_100012g31 [Nannochloropsis gaditana])

HSP 1 Score: 605.52 bits (1560), Expect = 0.000e+0
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
Query:    1 MTTSSLFLHPSRVGTAHVASLLICIGAIVNMPGVFATAVIGSMTPSSSDRWPPQLFVADLLLSSAFLTAGFFWVKTPDMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNEDGGRKSKKE 298
            MTTSSLFLHPSRVGTAHVASLLICIGAIVNMPGVFATAVIGSMTPSSSDRWPPQLFVADLLLSSAFLTAGFFWVKTPDMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNEDGGRKSKKE
Sbjct:    1 MTTSSLFLHPSRVGTAHVASLLICIGAIVNMPGVFATAVIGSMTPSSSDRWPPQLFVADLLLSSAFLTAGFFWVKTPDMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNEDGGRKSKKE 298          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|511002222|gb|EPB83664.1| (hypothetical protein HMPREF1544_09580 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 128.257 bits (321), Expect = 1.872e-31
Identity = 77/224 (34.38%), Postives = 125/224 (55.80%), Query Frame = 0
Query:   57 VADLLLSSAFLTAGF-FWVKTP-DMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKG 278
            ++  L+S+    + F FW KT    T +  A++ +  SS IT++ S+  +Y L      +  +L A    +    TFF+ FLI DL +G+ +Y S+I LL+GW+HH  YLG L WA+H+ ++  F +   LE+PTFILA+GS+  Q R D++F  TFL+TRI +H +  +    +  P  PV + ++  F +H +WF  + K   R   L    K+E  ++ + 
Sbjct:   12 ISTFLVSATLFGSWFTFWYKTNLARTERERAYVCTLLSSSITSTCSVPLVYTLLTNGGDLTEIL-AYRTWTVVATTFFMTFLITDLVIGVVFYRSKIELLTGWIHHITYLGTLTWAIHNQYTAVFIMMCSLELPTFILALGSVRSQLRRDYVFASTFLVTRILFHAYA-IKCAWVMKPYGPVVIALSAFFPVHCFWFYGFIKQQIR---LAAKRKQEALVNKQA 230          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|585107299|gb|EWM25533.1| (hypothetical protein Naga_100032g19 [Nannochloropsis gaditana])

HSP 1 Score: 124.02 bits (310), Expect = 6.727e-30
Identity = 65/178 (36.52%), Postives = 107/178 (60.11%), Query Frame = 0
Query:   76 TPDMTPKRLAWLLSAFSSFITASLSMSALYQL-FAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICY-HLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWF 251
            +P M  KR AW++S   S   +  S+  +Y+L +   +    +++ADDRLS F  +FF+ FL+LD+ +G+R YPS+I  L+GW HH  Y+    WA+    S+     + +E+PT ++A+G +    R+D+LFG TF  TRI Y  ++++ L+ ++  PR+ VW V      LH++WF
Sbjct:   68 SPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDV-SPRVVVWPVCLPAMALHLFWF 244          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|1178061476|gb|ORE16006.1| (hypothetical protein BCV71DRAFT_218679 [Rhizopus microsporus])

HSP 1 Score: 120.939 bits (302), Expect = 2.143e-29
Identity = 75/213 (35.21%), Postives = 123/213 (57.75%), Query Frame = 0
Query:   63 SSAFLTAGFFWVKTPDMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMD 275
            S  FL   FF +K P++  K+ +W+L+  SS +   +S+  + Q F  S +   +L  D +L      FFI++LILDL+LG  YY  ++ +++GW+HH FY+ VL W L    S  F +   LE+PT ILA+GS+  + RSD LFG TF + R+  H W+ + +++    ++ +W+V  V + LH+YWF    ++  +K  L +  +K  + D
Sbjct:   20 SFLFLGWCFFSIK-PNLNMKQTSWILTLISSLVCTLVSIPFVIQ-FLHSKLDMRLLDTDSKLHTAFTCFFISYLILDLSLGSIYYRERVTIMTGWIHHLFYIAVLFWFLRLQISSLFTVASILELPTVILAIGSMDHELRSDLLFGSTFFLLRLVAHAWMTIALKKYHRIKV-IWIVALVIYPLHLYWFYGIVRTNLKKKKLRRIVEKTISND 229          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|1178066166|gb|ORE20586.1| (hypothetical protein BCV71DRAFT_261868 [Rhizopus microsporus])

HSP 1 Score: 120.168 bits (300), Expect = 1.326e-28
Identity = 75/220 (34.09%), Postives = 119/220 (54.09%), Query Frame = 0
Query:   72 FWVKTP-DMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTAT-FFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNE 289
            FW K+    T + +A++ +  SSFIT+  S+  +Y LF  +  +  VL  D R      T FF+ FL++DL +G  +YP +I LL+GW+HH  Y+GVL WA+   +   F +   LE+PTF+LA+GS+  Q R D+LF  TF++TRI +H +  +   ++K P  P+ + +   F LH +WF  + K   R         K+       V  +  E+  +
Sbjct:   27 FWYKSKLARTEREIAYVCTLLSSFITSVSSIPLVYTLFRSN--LTRVL--DYRTWTVQITVFFMTFLVIDLMIGSLFYPKKIGLLTGWIHHIVYIGVLTWAISQGYCSIFIMMCLLEVPTFLLALGSVRNQFRHDYLFAFTFVLTRILFHAYTILCAFQLK-PFGPIMIALTAFFPLHCFWFYGFIKQQLRLSKTPSVPSKKRHYQSINVTTSRIEEKPQ 241          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|729704174|emb|CEI99139.1| (hypothetical protein RMCBS344292_13231 [Rhizopus microsporus])

HSP 1 Score: 117.472 bits (293), Expect = 2.571e-28
Identity = 70/182 (38.46%), Postives = 109/182 (59.89%), Query Frame = 0
Query:   72 FWVKTP-DMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTAT-FFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWF 251
            FW K+    T + +A++ +  SSFIT+  S+  +Y LF  +  +  VL  D R      T FF+ FL++DL +G  +YP +I LL+GW+HH  Y+GVL WA+   +   F +   LE+PTF+LA+GS+  Q R D+LF  TF++TRI +H +  +   ++K P  P+ + +   F LH +WF
Sbjct:   27 FWYKSKLARTEREIAYVCTLLSSFITSVSSIPLVYTLFRSN--LTRVL--DYRTWTVQITVFFMTFLVIDLMIGSLFYPKKIGLLTGWIHHIVYIGVLTWAISQGYCSIFIMMCLLEVPTFLLALGSVRNQFRHDYLFAFTFVLTRILFHAYTILCAFQLK-PFGPIMIALTAFFPLHCFWF 203          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|511005155|gb|EPB86502.1| (hypothetical protein HMPREF1544_06669 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 118.242 bits (295), Expect = 2.916e-28
Identity = 69/172 (40.12%), Postives = 102/172 (59.30%), Query Frame = 0
Query:   81 PKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLP-VWVVIAVTFCLHIYWF 251
             K+ +W L+  SS +   +S+  + Q F     +E +L  D+R       FFI++L+LDL LG  YYP +I L++GWVHH FY+  L+W L    S  F +   LE+PT ILA GS+  + RSD LFG TF + R+  H W+ V ++  +  R+P +W+V  V + LH+YWF
Sbjct:   50 EKQTSWFLTLSSSLVCTIVSIPFVIQFFYADLDME-LLGIDNRFHTGFVCFFISYLVLDLVLGSVYYPKRITLMTGWVHHLFYIFTLSWFLRLQISSLFTVTSILELPTLILAAGSMVHEWRSDLLFGSTFFVLRLVAHAWMMVALK--RHHRIPFMWIVALVIYPLHLYWF 218          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|727147474|emb|CEG70564.1| (hypothetical protein RMATCC62417_06436 [Rhizopus microsporus])

HSP 1 Score: 118.627 bits (296), Expect = 4.422e-28
Identity = 75/220 (34.09%), Postives = 118/220 (53.64%), Query Frame = 0
Query:   72 FWVKTP-DMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTAT-FFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNE 289
            FW K+    T + +A++ +  SSFIT+  S+  +Y LF  +  +  VL  D R      T FF+ FL++DL +G  +YP +I LL+GW+HH  Y+GVL WA+   +   F +   LE+PTF+LA+GS+  Q R D+LF  TF+ TRI +H +  +   ++K P  P+ + +   F LH +WF  + K   R         K+       V  +  E+  +
Sbjct:   27 FWYKSKLARTEREIAYVCTLLSSFITSVSSIPLVYILFRSN--LTRVL--DYRTWTVQITVFFMTFLVIDLMIGSLFYPKKIGLLTGWIHHIVYIGVLTWAISQGYCSIFVMMCLLEVPTFLLALGSVRNQFRHDYLFAFTFVFTRILFHAYTILCAFQLK-PFGPIMIALTAFFPLHCFWFYGFIKQQLRLSKTPSVPSKKRYYQSMDVTTSRIEEKPQ 241          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|758357499|emb|CEP20085.1| (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 117.472 bits (293), Expect = 4.608e-28
Identity = 71/193 (36.79%), Postives = 109/193 (56.48%), Query Frame = 0
Query:   60 LLLSSAFLTAGFFWVKTPDMTPKRLA-WLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWF 251
            L+L  +FL   +   +      +R + W L+  SSFI  ++S+  + Q F  + +   +L  D R       FFI++LILDL LG  YYP  I L++GWVHH FY+  L+W      S  F +   LE+PT +LA+GS+  + RSD+LFG TF + R+  H W+ V +++    +  +W+V  + + LHIYWF
Sbjct:   22 LILGGSFLLFRYHLCREDTAKQERQSSWFLTFVSSFICTAVSIPFVIQ-FCHADLDMELLAMDSRFHTGFVCFFISYLILDLVLGSIYYPKHITLMTGWVHHLFYIFTLSWFPRLQISSMFTVISILELPTLVLAIGSMVHEWRSDFLFGSTFFVLRLVVHAWMTVALKKYHRIQF-MWIVAVIVYPLHIYWF 212          
BLAST of EWM21604.1 vs. NCBI_GenBank
Match: gi|727138316|emb|CEG79016.1| (hypothetical protein RMATCC62417_13538 [Rhizopus microsporus])

HSP 1 Score: 118.627 bits (296), Expect = 5.014e-28
Identity = 74/220 (33.64%), Postives = 119/220 (54.09%), Query Frame = 0
Query:   72 FWVKTP-DMTPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTAT-FFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNE 289
            FW K+    T + +A++ +  SSFIT+  S+  +Y LF  +  +  VL  D R      T FF+ FL++DL +G  +YP +I +L+GW+HH  Y+GVL WA+   +   F +   LE+PTF+LA+GS+  Q R D+LF  TF++TRI +H +  +   ++K P  P+ + +   F LH +WF  + K   R         K+       V  +  E+  +
Sbjct:   27 FWYKSKLARTEREIAYVCTLLSSFITSVSSIPLVYILFQSN--LARVL--DYRTWTVQITVFFMTFLVIDLLIGSLFYPKKIGILTGWIHHIVYIGVLTWAISQGYCSIFVMMCLLEVPTFLLALGSVRNQFRHDYLFAFTFVLTRILFHAYAILCAFQLK-PFGPIMIALTAFFPLHCFWFYGFIKQQLRLSKTPSVPSKKRYYQSMNVTTSRIEEKPQ 241          
The following BLAST results are available for this feature:
BLAST of EWM21604.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101859|gb|EWM21604.1|0.000e+0100.00hypothetical protein Naga_100012g31 [Nannochlorops... [more]
gi|511002222|gb|EPB83664.1|1.872e-3134.38hypothetical protein HMPREF1544_09580 [Mucor circi... [more]
gi|585107299|gb|EWM25533.1|6.727e-3036.52hypothetical protein Naga_100032g19 [Nannochlorops... [more]
gi|1178061476|gb|ORE16006.1|2.143e-2935.21hypothetical protein BCV71DRAFT_218679 [Rhizopus m... [more]
gi|1178066166|gb|ORE20586.1|1.326e-2834.09hypothetical protein BCV71DRAFT_261868 [Rhizopus m... [more]
gi|729704174|emb|CEI99139.1|2.571e-2838.46hypothetical protein RMCBS344292_13231 [Rhizopus m... [more]
gi|511005155|gb|EPB86502.1|2.916e-2840.12hypothetical protein HMPREF1544_06669 [Mucor circi... [more]
gi|727147474|emb|CEG70564.1|4.422e-2834.09hypothetical protein RMATCC62417_06436 [Rhizopus m... [more]
gi|758357499|emb|CEP20085.1|4.608e-2836.79hypothetical protein [Parasitella parasitica][more]
gi|727138316|emb|CEG79016.1|5.014e-2833.64hypothetical protein RMATCC62417_13538 [Rhizopus m... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9079rna9079Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications