rna9079, rna9079 (mRNA) Nannochloropsis gaditana

Overview
Namerna9079
Unique Namerna9079
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1514
Alignment locationKK037251.1:285501..287114 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g31.1936.mrna
Orig protein idgnl|cribi|Naga_100012g31.1936
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:285501..287114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g31gene8805Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9079rna9079-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21604.1cds9049Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9079 ID=rna9079|Name=rna9079|organism=Nannochloropsis gaditana|type=mRNA|length=1514bp
GTGTCGTGTGGAAGTGGAATTGGCCTCGGAACCCGATGGTAGATGACAGT
AGGATCATGGGAGAGAGAACAACGGATCGTCGCCCAGAGCCTCTCCGTTG
CAGAAGCTGGGGAGGATTTATCCCTCTGGCCGACTTTTACGCTTTGTCAC
CCGTTATGCCAGTATGCCCTCTTACTGTCTCGATCTCACTGTGCCAACGT
GGAACTTGCTCGAGTTGCAGCCGATTTTAGCCGCATTGTCTTTTTTAGCC
AAGTTTTAGGCTGCTGAATGTCGTCACGGTCACCATCATTGCGTGTATCG
TCCCCACAAACAGCGCATCAAATTGTCCGCCGCGATGGCCCAATCCCACC
AATCTTCGAATAAATTGACGGAATTGGTCACAGATTTAGCCGTGAAATTG
GAGAAAGCCTGTGAGCCTGCACGGCTGGACGCAGCGTTGGCAGGAGACGT
GCTAGGAGAACTGGAAACCATTGATATGACGGTGGACATCTTGAAAAAAA
GCAAGGCAGGATTTGCTGTCAAGAAATGCAAGGCTGTCAAGGCCGATGGA
GCCTTTGCATCCGTGTGTGAACGTGCATCGCTTCTGTTCAAGAAATGGAA
AAGGGCTGTGGCTACCCCGTCCGACCCTACCCGCGGGGGGGAGAAGGCAA
CGAACGGGCGCCCGTCGGAGTCCCTGTCCACAGCATCCGTCAACAGCGGC
CCTGCCACAAGCATCAGTCCATTAACGTGCGGTGGCTCTCAGGGTAAGGC
AAGAAACGGAGAGCCCGTCGTGGAGGGGAACGCCCCACCGCCCTCCTCCG
GCCCCTCCACCTCCAGGCCTCCTCCCCTTCCGACTCAATCAGCCGCGGAC
CCCCCGAGCGTCTTATCCCACCTTGCCAGTGCTGAAGCGGCTATATTGGA
AGATTCGCTGCCGCCCTCACGCCTGAAAATTGCAAATTTATTCCTGGCGC
TCTTTCTCAAATACCCGGAGGGCCAGGAGGATCCGGGAAGGGCAGCGCGC
GTGGCGGTGGACATAGAGCAGGCCATGCAGAACGTGATGGACCACAAGCT
TGCCGCAAAGCAGTACGGAGACAAGGCTCGGTCTCTCAAGTACAACCTGG
GCATGAACGAGCATCTGCGGATGCGTGTTATCCTAAGCGACGTGGCGCCT
GCCGTGCTTGTCGCAATGAAGGCGGACGAAATGCAGCCCGAGGAGCATCG
CCAGGCCGCAGAGGCCGCCGCAGCCTTGGCCTACGAGGCAAATCTGCTGG
ATTGGCACGACAAGAATGCGGACAAGATTCGTAAACAGCTGGGAATTGAG
GACGTGGGGGGCTCTTTCACATGCGGGCGCTGCAAGGGGAACAAGACAAG
CTATCAAGCCAAGCAGACCCGATCTTCGGATGAGCCCATGACCATGTTCG
TCCGGTGCTTGACGTGTGGCAACCGGTGGAAAGAATAAAGAGGGGGGCGC
GGGGGCAAATTGAACAAATTTTACGACTGTGAATCCTCGCGCCGGCACCC
GCGTTACAGTGTGC
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protein sequence of rna9079

>rna9079-protein ID=rna9079-protein|Name=rna9079|organism=Nannochloropsis gaditana|type=polypeptide|length=298bp
MTTSSLFLHPSRVGTAHVASLLICIGAIVNMPGVFATAVIGSMTPSSSDR
WPPQLFVADLLLSSAFLTAGFFWVKTPDMTPKRLAWLLSAFSSFITASLS
MSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQ
IHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQ
RRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYW
FGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNEDGGRKSKKE
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mRNA from alignment at KK037251.1:285501..287114+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9079 ID=rna9079|Name=rna9079|organism=Nannochloropsis gaditana|type=mRNA|length=1614bp|location=Sequence derived from alignment at KK037251.1:285501..287114+ (Nannochloropsis gaditana)
GATTCCAAGGTCCCGTCTGCCATGTTGGAAGCCTCAATCCACCTTTTTTT
AATATATGTACCCATTTTATCATTCTTTCAGAGCAtaggaggcggaagga
ggcggcaAAACTTCACACATGACGACTTCGTCGTTGTTCTTGCACCCCTC
TCGCGTCGGTACTGCCCATGTGGCCAGCCTTCTCATATGCATCGGCGCCA
TCGTAAACATGCCCGGCGTCTTTGCTACAGCTGTAATTGGGAGTATgaca
ccttcttcctctgatCGATGGCCCCCCCAGCTTTTTGTGGCAGACCTATT
GCTGTCCTCTGCTTTTTTGACAGCGGGATTTTTTTGGGTAAAGACGCCGG
ACATGACCCCGAAGCGCCTGGCCTGGTTACTGAGTGCCTTTAGTAGCTTC
ATCACCGCATCATTGAGCATGTCTGCTTTGTATCAGTTGTTCGCTCAGTC
GTGGGTAATAGAAAACGTCCTATTTGCCGACGATCGTCTGAGTCGCTTCA
CGGCCACGTTCTTCATTGCCTTCCTAATCTTGGACTTGGCCTTAGGCATG
CGGTGAGCTTGGTGGGACGTAAGACGAGTTGCGGGCAAGGGCGTGAACGG
AGCTGTCGAGGATTAGGTTTTGTGACAGTCGGAAAAATGCGCAAGTGTTC
GTCAAAGCTGTGCGGGAGTTTGCCAACGTGTGTCTTCAAAGCGGTAGCGG
GGAGCCGGGTGTCGTGCATGTCGTGTTGGGATCTTTCCCTGCTTCatctc
tctcacctccccctcactcaTCCACCGTTTGCAGGTACTACCCATCCCAA
ATCCACCTGTTGAGCGGGTGGGTGCACCATTGCTTCTATCTGGGGGTCTT
GGCCTGGGCCCTCCATTCCCACTTCTCCCTCGGCTTCTGCCTCTTTTTGC
CCCTGGAGATCCCCACCTTCATCCTGGCCGTCGGCTCCATATACCCCCAG
CGCCGAAGCGATTGGCTCTTTGGCATGACGTTTTTAATCACCAGGATTTG
CTACCACCTCTGGTTGTTCGTCCTTGTGAGGGAGATCAAGGACCCGCGGC
TGCCCGTGTGGGTGGTGATTGCGGTCACCTTCTGTCTGCACATATATTGG
TTCGGATTATGGTGGAAAAGTTACAGGAGAAAATATTtgttggggaaggg
agggaagaaagagggtgccatggatgggaagggcgtggcagcagcggcgg
gggagcagggtaacgaggatggggggaggaagagcaagaaggagTGAGAA
AAGCATGGCTGGTGTAGACGCAGAACAAGGGaaccggggaggaaggcggc
acTGTGATTGCGTCGGATTCACAGGTGACAAGGGaccgctttcctcttca
gtGTCCACGCGTGGGCGACGGGCAGGGTCCGGGTTTTGAGGTGGATGAGG
TGCATGTATCAAATCAGCATTTTTGAGCCAGGAAATGCGTGACTGCCGTA
ATCATGTGTGTGCAGACGCCAAAGAAAacgagcagggaggatgcTGGACT
CGACGTCGCTCTCACCTGTGTCCACCAAGAGGGGCTTgagaaggtggggg
gagaagcTCCTGTACACAGACATCGCACAAGGGATTAATGATTGAAAGAA
ATACAGAATCATTA
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Coding sequence (CDS) from alignment at KK037251.1:285501..287114+

>rna9079 ID=rna9079|Name=rna9079|organism=Nannochloropsis gaditana|type=CDS|length=1794bp|location=Sequence derived from alignment at KK037251.1:285501..287114+ (Nannochloropsis gaditana)
ATGACGACTTCGTCGTTGTTCTTGCACCCCTCTCGCGTCGGTACTGCCCA
TGTGGCCAGCCTTCTCATATGCATCGGCGCCATCGTAAACATGCCCGGCG
TCTTTGCTACAGCTGTAATTGGGAGTATgacaccttcttcctctgatCGA
TGGCCCCCCCAGCTTTTTGTGGCAGACCTATTGCTGTCCTCTGCTTTTTT
GACAGCGGGATTTTTTTGGGTAAAGACGCCGGACATGACCCCGAAGCGCC
TGGCCTGGTTACTGAGTGCCTTTAGTAGCTTCATCACCGCATCATTGAGC
ATGTCTGCTTTGTATCAGTTGTTCGCTCAGTCGTGGGTAATAGAAAACGT
CCTATTTGCCGACGATCGTCTGAGTCGCTTCACGGCCACGTTCTTCATTG
CCTTCCTAATCTTGGACTTGGCCTTAGGCATGCGGTACTACCCATCCCAA
ATCCACCTGTTGAGCGGGTGGGTGCACCATTGCTTCTATCTGGGGGTCTT
GGCCTGGGCCCTCCATTCCCACTTCTCCCTCGGCTTCTGCCTCTTTTTGC
CCCTGGAGATCCCCACCTTCATCCTGGCCGTCGGCTCCATATACCCCCAG
CGCCGAAGCGATTGGCTCTTTGGCATGACGTTTTTAATCACCAGGATTTG
CTACCACCTCTGGTTGTTCGTCCTTGTGAGGGAGATCAAGGACCCGCGGC
TGCCCGTGTGGGTGGTGATTGCGGTCACCTTCTGTCTGCACATATATTGG
TTCGGATTATGGTGGAAAAGTTACAGGAGAAAATATTtgttggggaaggg
agggaagaaagagggtgccatggatgggaagggcgtggcagcagcggcgg
gggagcagggtaacgaggatggggggaggaagagcaagaaggagTGAATG
ACGACTTCGTCGTTGTTCTTGCACCCCTCTCGCGTCGGTACTGCCCATGT
GGCCAGCCTTCTCATATGCATCGGCGCCATCGTAAACATGCCCGGCGTCT
TTGCTACAGCTGTAATTGGGAGTATgacaccttcttcctctgatCGATGG
CCCCCCCAGCTTTTTGTGGCAGACCTATTGCTGTCCTCTGCTTTTTTGAC
AGCGGGATTTTTTTGGGTAAAGACGCCGGACATGACCCCGAAGCGCCTGG
CCTGGTTACTGAGTGCCTTTAGTAGCTTCATCACCGCATCATTGAGCATG
TCTGCTTTGTATCAGTTGTTCGCTCAGTCGTGGGTAATAGAAAACGTCCT
ATTTGCCGACGATCGTCTGAGTCGCTTCACGGCCACGTTCTTCATTGCCT
TCCTAATCTTGGACTTGGCCTTAGGCATGCGGTACTACCCATCCCAAATC
CACCTGTTGAGCGGGTGGGTGCACCATTGCTTCTATCTGGGGGTCTTGGC
CTGGGCCCTCCATTCCCACTTCTCCCTCGGCTTCTGCCTCTTTTTGCCCC
TGGAGATCCCCACCTTCATCCTGGCCGTCGGCTCCATATACCCCCAGCGC
CGAAGCGATTGGCTCTTTGGCATGACGTTTTTAATCACCAGGATTTGCTA
CCACCTCTGGTTGTTCGTCCTTGTGAGGGAGATCAAGGACCCGCGGCTGC
CCGTGTGGGTGGTGATTGCGGTCACCTTCTGTCTGCACATATATTGGTTC
GGATTATGGTGGAAAAGTTACAGGAGAAAATATTtgttggggaagggagg
gaagaaagagggtgccatggatgggaagggcgtggcagcagcggcggggg
agcagggtaacgaggatggggggaggaagagcaagaaggagTGA
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Synonyms
Publications