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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100012g23.1937.mrna |
| Orig protein id | gnl|cribi|Naga_100012g23.1937 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:270182..271746 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9071 ID=rna9071|Name=rna9071|organism=Nannochloropsis gaditana|type=mRNA|length=1087bp
TAAGCCATGAAAATTTGGGATGATGTACCGTCTCGTGCAAAGCATAGTAG
AGTCCAGGCCGATCGCAACTGTTCATCGGCAAGCTGGATATGATCATCTC
CCTCCCTACAGACCATCATGCATGTTGTCTTACGTGCCTCTGATTATCTG
GCCAGTCTGCACTATTCTCACCCACACCACCGCATGATTAAACAGATACT
TCCTTCTTTGGGATTACAGCAGCATTGAAAACTTCGGATCAGGACGTTTG
CACGATTGTAAACGCTGACTTTTTGGGTGCGGATAGCGTTGCATAAGCTT
ACTGCGGCATCCGAGAAGCACCATGAAGCTAGTCAGGCGTTTGCACCAAC
ACATTCCCTCTCGTCGTAAACCTTTGCAGATTTTTGATGAAGCTGAATAA
TGAGACCGTCACCATTGAATTGAAGAATGGCACGACCATCCAAGGCACTA
TTTCTGGCGTCGACGTGTCGATGAACACGTACCTCAAGAACGTGAAGGTT
ACGCTGAAAGGCAAGAATCCCGTCTCGTACGAGAGCCTGTCCATCCGTGG
CAATAATATTCGCTACTATATTCTGCCGGATGCCCTTAATTTGGACGCAT
TGTTGGTGGATGATGGTCCGAAAAATAAGCTGAAGCCCGGGGCGCAAGCT
GGAGGACGGGGTAGGGGGCGCGGAGTTGGCGGGCGGGGTGGGAGGGGAAG
GGGTGGTCCAGGCGGTAGGGGCAGGGGCAGATTTTAAGTAAATGACGTAA
TGTAGATTCTCTTCGAAAAATTTGATCCTGAGGTGGGGTCGGGATGCGCG
GGAGGGCTGGACAGCAGAGATGCAGGACAGCTCGGGGTAATTGATGTACT
TCCCTTATATTTGGGACGGTTACCCATTAGTTTCGTGACAGCATGTTTCA
CAAAAACATGATGTTCGGTTGCGAAACGAGTCAGGGGCGATGGGACGTTC
CCGCTTTGGCATGTGCGAGATCCGAGCAACCTTAAAGATCGAAGAACTAA
GGAGTGAGTATAAATTGAGCCTTGTCTGCAATTCATACCATCGGGAGGCT
GCTTCGTCTCCGCCACCGCGAGGCTTTTTTCTAAGCA back to topprotein sequence of rna9071 >rna9071-protein ID=rna9071-protein|Name=rna9071|organism=Nannochloropsis gaditana|type=polypeptide|length=389bp
MVASSYPHPSVTDDTACALTAIEEERLANIKKNHAVLVSVGLASHGLAAS
RPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALT
SSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSR
TRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVE
WRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGR
MIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVF
MGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEGEAA
GRVNGPCGGEKEKDGGGTEEGKGSEGQGMGRRGKRARAK back to topmRNA from alignment at KK037251.1:270182..271746+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9071 ID=rna9071|Name=rna9071|organism=Nannochloropsis gaditana|type=mRNA|length=1565bp|location=Sequence derived from alignment at KK037251.1:270182..271746+ (Nannochloropsis gaditana)
ACGGGGAGTAGACAGTGAAAGGATGAAAACGGCAGGCGGGCACCTGTGTT
TTGTTGCTATGACATATATCAAGACTTTGCGCAATTGCTGGCTCTTTCAT
AGGTCCATACGACAGGAAAGAGATTTACTCGGGGGTGCGTGAACCTCGCA
ACTTGCGGCAcactcttctttcctcttccttctttgctGAGTGTTTTGAG
CCATTACTATCTCTTTTTCAATGCAACAGGGGCATTCATGGTGGCTTCGT
CATATCCTCATCCCTCTGTAACCGATGATACGGCATGCGCTCTGACTgcg
atcgaggaggagcgtctCGCGAACATAAAGAAGAACCatgccgtcctcgt
ctctgTGGGCCTAGCTTCCCATGGCCTCGCTGCATCTCGTCCGAAAAATA
ACTTCAGCAGCCTAAAAGGTGTGCATAGGCTCAAACGCCCTCCAAAACCA
CCTACCCTGCCAACACGGCGATCCATTCGCAACTTAGGTCGGGACGCGCC
CGATTACAAAGAAGATAGTATTTCGTATGCCTTGAcatcgtctcctccag
cttttACCGTGGGTCCTCGTCATAAATGGaatgcagaggaggatgccgcG
TTTTCCGATAAGGCTTGGGATGCACCGTCCAAGGCAGTATTGGCAAGCAC
TCCCACAGGGCGTACAACAACTCCTGGAAGCTCACGCACCCGGACGGCGG
ATGTTTCTCGCCTTGCGGAGTACTTGGGAAAGCCGGTACCTTATACCGGA
AAACAATGCGTCATGGACTTGATAAGTCCAGCAAATGAAGATGGACAAGG
CCCCGTGAAGTTTAGTAAATATGCTGGGGTTGTGGAATGGCGAAATTGCG
TGGTTTTGTGGGTGAACGCCGACGGGCATGACTACGAAAACTTGTttctg
ggggagggacgacagATGACATGGTTTGCGGGTAGCCGCGTTACTGCCGA
AACGCCGGTTATGCTCCGGCTGCtagcggcggggaggatgattaaggaag
aggagcgaaaAACGAGAGAAGGTGAAATTATACAAagcaggggggcgggg
tcggagCCTGCAGAGATtcgagaagaggggggggggcaggaggacaTATT
GTTGTTTTGCAGGCGACAGGGGGAGCCATACGTATTCATGGGCAGGATAT
GGTACGTTTGGTGCGAGGTGAATCGGCATCCGATCAAAGTGTTGTGGGAG
CTGCGGGACTTCGAGGCAATCCGAGACAGCCCCCACGTGCGGGAGGTGAT
GGGAGGCGTAGatgtggaaaaggaaggggaggcggcgggtcGGGTCAATG
GGCCGTGTggtggagagaaagagaaagatgggggcgggacagaggagggg
aaagggagcgaagggCAGGGCATGGGGCGTCGAGGCAAGCGAGCCCGGGC
GAAGTGATGGAAAGGGCCTTTTTGAACGGATAGAGGCGCGAAATAAAGCA
TATGTACAAACGTGCAGAGGACAATGTGATTTTCAATTCCCCCGGAGGGG
TTTCATGTCTCTTGTGTGAGAAGCCTTAtgttcctgtcctccctgtTGGG
CTACCTCGAACGCTC back to topCoding sequence (CDS) from alignment at KK037251.1:270182..271746+ >rna9071 ID=rna9071|Name=rna9071|organism=Nannochloropsis gaditana|type=CDS|length=1170bp|location=Sequence derived from alignment at KK037251.1:270182..271746+ (Nannochloropsis gaditana)
ATGGTGGCTTCGTCATATCCTCATCCCTCTGTAACCGATGATACGGCATG
CGCTCTGACTgcgatcgaggaggagcgtctCGCGAACATAAAGAAGAACC
atgccgtcctcgtctctgTGGGCCTAGCTTCCCATGGCCTCGCTGCATCT
CGTCCGAAAAATAACTTCAGCAGCCTAAAAGGTGTGCATAGGCTCAAACG
CCCTCCAAAACCACCTACCCTGCCAACACGGCGATCCATTCGCAACTTAG
GTCGGGACGCGCCCGATTACAAAGAAGATAGTATTTCGTATGCCTTGAca
tcgtctcctccagcttttACCGTGGGTCCTCGTCATAAATGGaatgcaga
ggaggatgccgcGTTTTCCGATAAGGCTTGGGATGCACCGTCCAAGGCAG
TATTGGCAAGCACTCCCACAGGGCGTACAACAACTCCTGGAAGCTCACGC
ACCCGGACGGCGGATGTTTCTCGCCTTGCGGAGTACTTGGGAAAGCCGGT
ACCTTATACCGGAAAACAATGCGTCATGGACTTGATAAGTCCAGCAAATG
AAGATGGACAAGGCCCCGTGAAGTTTAGTAAATATGCTGGGGTTGTGGAA
TGGCGAAATTGCGTGGTTTTGTGGGTGAACGCCGACGGGCATGACTACGA
AAACTTGTttctgggggagggacgacagATGACATGGTTTGCGGGTAGCC
GCGTTACTGCCGAAACGCCGGTTATGCTCCGGCTGCtagcggcggggagg
atgattaaggaagaggagcgaaaAACGAGAGAAGGTGAAATTATACAAag
caggggggcggggtcggagCCTGCAGAGATtcgagaagaggggggggggc
aggaggacaTATTGTTGTTTTGCAGGCGACAGGGGGAGCCATACGTATTC
ATGGGCAGGATATGGTACGTTTGGTGCGAGGTGAATCGGCATCCGATCAA
AGTGTTGTGGGAGCTGCGGGACTTCGAGGCAATCCGAGACAGCCCCCACG
TGCGGGAGGTGATGGGAGGCGTAGatgtggaaaaggaaggggaggcggcg
ggtcGGGTCAATGGGCCGTGTggtggagagaaagagaaagatgggggcgg
gacagaggaggggaaagggagcgaagggCAGGGCATGGGGCGTCGAGGCA
AGCGAGCCCGGGCGAAGTGA back to top
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