EWM21605.1, cds9041 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|585101860|gb|EWM21605.1| (hypothetical protein Naga_100012g23 [Nannochloropsis gaditana]) HSP 1 Score: 799.66 bits (2064), Expect = 0.000e+0 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query: 1 MVASSYPHPSVTDDTACALTAIEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEGEAAGRVNGPCGGEKEKDGGGTEEGKGSEGQGMGRRGKRARAK 389
MVASSYPHPSVTDDTACALTAIEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEGEAAGRVNGPCGGEKEKDGGGTEEGKGSEGQGMGRRGKRARAK
Sbjct: 1 MVASSYPHPSVTDDTACALTAIEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEGEAAGRVNGPCGGEKEKDGGGTEEGKGSEGQGMGRRGKRARAK 389
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|553195841|ref|XP_005856217.1| (hypothetical protein NGA_2023310, partial [Nannochloropsis gaditana CCMP526] >gi|422292841|gb|EKU20143.1| hypothetical protein NGA_2023310, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 747.658 bits (1929), Expect = 0.000e+0 Identity = 363/365 (99.45%), Postives = 363/365 (99.45%), Query Frame = 0
Query: 1 MVASSYPHPSVTDDTACALTAIEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEGEAAGRVNGPCGGEKEKDG 365
MVASSYPHPSVTDDTACALTAIEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRM KEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVW EVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEGEAAGRVNGPCGGEKEKDG
Sbjct: 7 MVASSYPHPSVTDDTACALTAIEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMRKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWYEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEGEAAGRVNGPCGGEKEKDG 371
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|676387579|ref|XP_009037068.1| (hypothetical protein AURANDRAFT_64232 [Aureococcus anophagefferens] >gi|323452473|gb|EGB08347.1| hypothetical protein AURANDRAFT_64232 [Aureococcus anophagefferens]) HSP 1 Score: 123.635 bits (309), Expect = 9.571e-28 Identity = 106/330 (32.12%), Postives = 158/330 (47.88%), Query Frame = 0
Query: 18 ALTAIEEERLANIKKNHAVLVSVGL--ASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEED-----AAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAE-YLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQED-ILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVM 338
AL+ E+ R+ANI +N A L +GL A+H +AA + + + R RP P PTRRS+R AP+YKE + S A +AE D AA + A ++A P S + D+ L E YLGK +P G Q ++ A+ GP FS+ +G+ EWRNCV+L+VN G Y+N F+G G ++TWFA R TPV+ RL I G E E E +E +LLFCR +G+ YV+ G + Y+ + +R PI+ +W+L D++ I+ + + ++
Sbjct: 148 ALSEYEQLRVANILRNAAELKRLGLDVAAHTMAALGKQA--PTARTQKRAVRPKGAP--PTRRSLRAAKLPAPEYKEPTGSAA-------------RALDAEVDDEGRVAAPGGRRKRAKTEAY------APPANPSSIKNLDVDLDGLRERYLGKIIPPMGGQVKRAVMEAAS--AGGPPTFSRMSGIQEWRNCVMLFVNVYGEGYKNSFVGGGTEITWFAQPRQWEGTPVVQRL-------------------INCDGGVVEDDETGETSTFEETPVLLFCRDEGQGYVYCGELSYLGHDPDRIPIRFVWKLDDYDLIKGTAEFKSLV 433
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|1129178373|gb|OLP86367.1| (Pentatricopeptide repeat-containing protein, chloroplastic [Symbiodinium microadriaticum]) HSP 1 Score: 109.768 bits (273), Expect = 2.760e-22 Identity = 69/213 (32.39%), Postives = 107/213 (50.23%), Query Frame = 0
Query: 141 GRTTTPGSSRTRTADVSRLAEYLGKPVPYTGKQCVMDLISPANEDG----QGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAE-TPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCR-RQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDVEKEG 347
GR +T S++ ADV +L YLG+ P+ GK+ V+ +P N G P +F+KYAG EW N + LWVNA G +EN F G Q++W+ G + +E +P++ RLL+ R + E++KT+ I+LF R R EPYV G YV + + W+L++F ++++ ++M DV K G
Sbjct: 21 GRPSTGKSTKVLKADVRQLQRYLGRSCPHFGKKGVVQFFAPGNAKGTEISSAPPRFNKYAGWAEWENAIFLWVNAVGGSFENTFRNGGSQVSWYVGGQKPSEKSPIVKRLLSKARG-EAEQKKTK--------------------------IILFVRPRATEPYVVCGPCAYVAHNARKKGFEFTWKLQEFASLKNCADFNQLM---DVAKRG 203
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|551629071|ref|XP_005794516.1| (hypothetical protein EMIHUDRAFT_194796 [Emiliania huxleyi CCMP1516] >gi|485649181|gb|EOD42087.1| hypothetical protein EMIHUDRAFT_194796 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 105.145 bits (261), Expect = 4.523e-22 Identity = 100/334 (29.94%), Postives = 146/334 (43.71%), Query Frame = 0
Query: 19 LTAIEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRD---APDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRL-----AEYLGKPVPYTGKQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCR---RQGEPYVFMGRIWYV--WCEVNRHPIKVLWELRDFEAIRDS-PHVREVM 338
L+A E ERL N+++N A L S+GL A +R + SS K RP P LPT +++R R Y + + +PP + E A A A+ + P R GS+R DV L E++ P + K V+ L++ A G+ +FSKYAG +EW N V L++N G DY N F GR+++WF GS++ +TP++ RLL +E +LLFCR R+ YV GR+ YV W HP+K W+L DF+ + S P + +M
Sbjct: 6 LSAYELERLENMRRNAAHLASLGLDDASSAPARSRGGASSRK------RPAAPRPLPTAQAVRRSSRQRVAVTPYTDATPLPDARRAPPPSSASHAEPVGYGEPTALDAAGAAAMRSALESREPAER----GSTRGVRVDVPALLRGGLGEHVAGP---STKASVVALLAGAGGSGRQMPRFSKYAGGLEWENAVSLFINIGGSDYNNTFSHGGRRVSWFGGSKMHLDTPLVQRLLTGAEAEEEGGEGGEG----------------------AATVLLFCREVGRETGAYVCCGRLRYVQHW---QVHPLKFEWDLLDFDELAASKPPFKALM 301
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|1001615390|gb|KXS19136.1| (hypothetical protein M427DRAFT_152648 [Gonapodya prolifera JEL478]) HSP 1 Score: 95.9005 bits (237), Expect = 5.726e-19 Identity = 90/339 (26.55%), Postives = 134/339 (39.53%), Query Frame = 0
Query: 22 IEEERLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPK--PPTLPTRRSIRNLGRDAP-----DYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAEYLGKPVPYTG--KQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNA---DGHD----------YENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVM 338
E R I+ N A+L S+ + S S G R ++ + PP P+RRS R LG P D +D IS + S T R +A +A P S+R R A + +YLGK +P G K V+ A G + F+KYAG++EW NC+ L+VN HD YEN F R +++F +ETPV+ R++ E+K + +LLFCR +G+ Y F GR+ V + + PI + + D+ AI P +E++
Sbjct: 8 FETLRTERIRSNQALLASLDIPS-----------ISGTNGPSRSRKRTREGPPPRPSRRSDRILGVTPPSEPLADDIDDRISRSEKPSKTQRTTTKRSGISAPTEA------------------------NPKSTRIRIAKLDSFDDYLGKLIPANGGNKAAVV-----AMGAGTSDISFNKYAGIIEWTNCIFLFVNVPLPPSHDNKGKRAPASSYENAFSTTERTVSFFGKPSQHSETPVIQRIV---------EKK--------------------------DPVLLFCRYEGQQYRFFGRLELVVSSLQQSPIAFTFRMLDWSAIEAQPDAKEMI 271
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|397627475|gb|EJK68488.1| (hypothetical protein THAOC_10323, partial [Thalassiosira oceanica]) HSP 1 Score: 96.6709 bits (239), Expect = 1.360e-18 Identity = 89/320 (27.81%), Postives = 137/320 (42.81%), Query Frame = 0
Query: 26 RLANIKKNHAVLVSVGLASHGLAASRPKNNFSSLKGVHRLKRPPKPPTLPTRRSIRNLGRDAPDYKEDSISYALTSSPPAFTVGPRHKWNAEEDAAFSDKAWDAPSKAVLASTPTGRTTTPGSSRTRTADVSRLAE-----YLGKPVPYTGKQCVMDL-ISPANEDGQG-----PVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCR------RQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAI 328
R A I +N A L S+GL S + P+ K + P P RRS R + AP+YK+ S+P P K +E ++ + S A+ S R+ + DV+ L LG+ + +TGK+ V++ S A+ED + + F+KY GV EW NC+ LWVN D N FLG GRQ+TWF GSR+ E+PV+ +L+ G+ + ++ I+L+CR ++ PY +GR+ Y P+ +W L D + +
Sbjct: 72 RKAKIARNEARLKSLGLHSTKQQSVTPRP-----KTAPAARAKPAAHDGPVRRSGRLSSKAAPNYKD-------VSAPGVERRLPSRKRLHDEAGLLEEEPLNKRSYTKPAAPRRSAPAA-NSVRSISLDVAHLVTDTEQGVLGRMLEHTGKEFVINTAFSSASEDDKARLHGTKLSFNKYCGVQEWANCIFLWVNLGNADSPNEFLGGGRQITWFGGSRMHDESPVVEKLIRYGK-----------------------------DATSRDKIILWCRMYQTETKKFSPYACLGRLGYQSHIPRSQPLSFVWNLLDHDQL 349
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|470298281|ref|XP_004346121.1| (hypothetical protein CAOG_05448 [Capsaspora owczarzaki ATCC 30864] >gi|765554269|gb|KJE94890.1| hypothetical protein CAOG_005448 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 94.7449 bits (234), Expect = 4.826e-18 Identity = 61/178 (34.27%), Postives = 91/178 (51.12%), Query Frame = 0
Query: 162 YLGK--PVPYTG---KQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNADGHDYENLFLGE--GRQMTWFAGSRVTAETPVMLRLLAAGRM-IKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDS 331
+LG+ P+P G K VM L++ + F + +GV +W+N V L+VN DG+ Y+N F G MTWFA ++ ++PV+ RLL A R +K ++ QS AG E+ +LLFCR EPYV+ GR+ VW + P+K W L+D ++ S
Sbjct: 143 WLGRQLPLPAVGAGLKTAVMALVA----GTRSAPAFPRLSGVQQWKNAVCLFVNLDGNTYDNTFSQAQGGFAMTWFASAQTNMDSPVIQRLLKAERYDLKNDDSAPSR----QSTEAGLHKPEV---------VLLFCRLLMEPYVYCGRLALVWVDPKTSPLKFTWFLKDSSSMMAS 303
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|1210526273|dbj|GAX15191.1| (hypothetical protein FisN_12Lh109 [Fistulifera solaris]) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-16 Identity = 59/188 (31.38%), Postives = 95/188 (50.53%), Query Frame = 0
Query: 163 LGKPVPYTGKQCVMDLIS-PANEDGQGPVKFSKYAGVVEW-RNCVVLWVN--ADGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAI-----RDSPHVREVMGGV 341
LGK + +TGK VM+ + A D V F+KY+GV EW N + LWVN A D N F +GR+++WF GSR+ TPV+ +L G + + E+ + EG ++ R S+ ++ PYV +GR+ + + + P+K +W L D+EA+ +D H+ + G+
Sbjct: 126 LGKKMAHTGKAFVMEESARLAVADDVHQVSFNKYSGVQEWGNNVLFLWVNLGAPNSDVVNDFFNDGREVSWFGGSRMHENTPVIQKLKTIG-LKADLEKSSSEGIVLWCRTFVSD------------------QKTFSPYVCLGRLSLLTVDPSSQPVKFVWNLMDYEALSSSSSKDGKHIIRDLCGL 294
BLAST of EWM21605.1 vs. NCBI_GenBank
Match: gi|145341254|ref|XP_001415728.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144575951|gb|ABO94020.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 87.8113 bits (216), Expect = 8.385e-16 Identity = 59/193 (30.57%), Postives = 93/193 (48.19%), Query Frame = 0
Query: 160 AEYLGKPV--PYTG----KQCVMDLISPANEDGQGPVKFSKYAGVVEWRNCVVLWVNA---DGHDYENLFLGEGRQMTWFAGSRVTAETPVMLRLLAAGRMIKEEERKTREGEIIQSRGAGSEPAEIREEGGGQEDILLFCRRQGEPYVFMGRIWYVWCEVNRHPIKVLWELRDFEAIRDSPHVREVMGGVDV 343
A YLG+P+ P + K V+ +SP + KFSK +G+ EW+NCV L+VN G+ Y+N+F G ++TWFA R ++PV+ ++ + EE + G + P + + LFCR +G YV+ GR+ V + + P+K L D +R S H +G VD+
Sbjct: 129 ANYLGEPIHPPESDRGALKAAVVHALSPVSNP-----KFSKMSGIQEWKNCVALYVNVGDKHGNAYDNVFTRAGSRITWFAQPRQDEDSPVIKSIMKTSTL---EEESVEDAMTRAENGEEAAPKYV------DWPLHLFCRMEGCEYVYCGRLKMVDVDTKKRPMKFTMRLVDAPLLRGSEH---FLGLVDL 304 The following BLAST results are available for this feature:
BLAST of EWM21605.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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