EWM21667.1, cds9005 (CDS) Nannochloropsis gaditana

Overview
NameEWM21667.1
Unique Namecds9005
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:163531..164745 +

Link to JBrowse

Properties
Property NameValue
Start range163531
Start range.
Protein idEWM21667.1
Productcarboxyl-terminal protease
Partialtrue
Orig transcript idgnl|cribi|Naga_100611g3.5797.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:163531..164745 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|585101932|gb|EWM21667.1| (carboxyl-terminal protease, partial [Nannochloropsis gaditana])

HSP 1 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query:    1 PPSFLPRNPSLLPVSEGRNSSLPPSLSPLLPPYPTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGGREGKGKEGRYWQVLQGPRREGGTGQQAVGGKERGREDNGKGKVARGGKEGGREENGRGKVAWYGGREKEGVSREGRAGAGGDTGKEERSEPVAPNVPVDRPGTVTPPHFRRTSAPPSSPASRVPSGVARAWS 404
            PPSFLPRNPSLLPVSEGRNSSLPPSLSPLLPPYPTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGGREGKGKEGRYWQVLQGPRREGGTGQQAVGGKERGREDNGKGKVARGGKEGGREENGRGKVAWYGGREKEGVSREGRAGAGGDTGKEERSEPVAPNVPVDRPGTVTPPHFRRTSAPPSSPASRVPSGVARAWS
Sbjct:    1 PPSFLPRNPSLLPVSEGRNSSLPPSLSPLLPPYPTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGGREGKGKEGRYWQVLQGPRREGGTGQQAVGGKERGREDNGKGKVARGGKEGGREENGRGKVAWYGGREKEGVSREGRAGAGGDTGKEERSEPVAPNVPVDRPGTVTPPHFRRTSAPPSSPASRVPSGVARAWS 404          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|298706117|emb|CBJ29210.1| (carboxy-terminal peptidase [Ectocarpus siliculosus])

HSP 1 Score: 169.474 bits (428), Expect = 1.694e-42
Identity = 92/239 (38.49%), Postives = 143/239 (59.83%), Query Frame = 0
Query:   34 PTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGG 272
            P+GRCIQSV Y       GGV +G E+  +G                 G+ A+++PE ER+ F TTHGRVV DGGGVEAD+KV  P+ S LE++LQ QG +FDFA +W+  HT+       +G  +VTD   ++F ++V +++KEG+     ++   LE L + L+ +      K ++ L   + +E+   F++ K +I+  +E+AIL+RY PES++ R  L+ DPQ +VA+E V++ G
Sbjct:  651 PSGRCIQSVNYKE-----GGVAMGEEKQSSGF----------------GFEASEVPELERKEFVTTHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF-------KGTDVVTDGVLRDFKNFVYKRQKEGTYDLAAIYGPQLESLESILEDSNLGHYEKLVEPLPKKLTQEMLTAFDSRKERIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 861          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|219128277|ref|XP_002184343.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404144|gb|EEC44092.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 164.466 bits (415), Expect = 7.529e-41
Identity = 90/235 (38.30%), Postives = 136/235 (57.87%), Query Frame = 0
Query:   34 PTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAV 268
            P+GRCIQ V Y      GGG+    EE+G                   GY+A+ + +++R+ +YT  GR+VRDGGGVEAD K+ AP+AS LEV+L + G+F ++A EWS  H  T    V E         Y+ F+ +V +K+K G +  D L++  L  L+ AL  + YK A K ++ L+A +  EV ++F+ ++  IKE++ Q ILARY PES+L    ++ D QV+ A++ V
Sbjct:  596 PSGRCIQGVNYK----GGGGL---KEENG-------------------GYIASKVADADRKVYYTKAGRMVRDGGGVEADYKIEAPKASALEVTLLRSGMFNEYAAEWSKTHMLTNNFAVDED-------IYRNFIAFVDQKQKTGDIELDALYSRPLSDLKKALKRSGYKGAEKEVEVLQANIVREVQKDFDKYRKDIKEDISQGILARYLPESMLIERGMKNDAQVEAAIKLV 797          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|1072231001|gb|OEU15734.1| (Peptidase_S41-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 160.229 bits (404), Expect = 3.764e-40
Identity = 97/264 (36.74%), Postives = 150/264 (56.82%), Query Frame = 0
Query:    5 LPRNPSLLPVSEGRNSSLPPSLSPLLPPYPTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAV 268
            L +N   LP     N++L  +++    P  +GRCIQSV Y      GGG+    E++G                    Y ++ +P+ +RQ F+T  GR VRDGGGVEAD KVAAP+AS LEV+L +  +  +FA++WS K+  T    V       TD  Y+EF D+V  K K G ++ + L+ GAL+ L+ AL  + YK + + +D LK  + +E   +F  +K +IKE++  +IL+RY PES+L + +L+ D QV+ A++ +
Sbjct:  296 LVQNVEDLPF----NTALKFTVAKYYTP--SGRCIQSVNYKE----GGGL---DEQNGR-------------------YQSSTVPKKDRQVFFTKSGRTVRDGGGVEADYKVAAPKASALEVTLLRSDIMNEFASQWSQKYELTNNFEV-------TDDIYREFQDFVEVKVKGGDLKLEALYAGALDDLKRALSQSGYKSSEREVDQLKTQIVKESKNDFEKYKKEIKEDIATSILSRYIPESMLMKRSLKTDDQVQEAIKLL 520          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|224004336|ref|XP_002295819.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|209585851|gb|ACI64536.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 148.288 bits (373), Expect = 3.538e-35
Identity = 93/274 (33.94%), Postives = 143/274 (52.19%), Query Frame = 0
Query:   34 PTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGGREGKGKEGRYWQVLQGPRREGGTGQQAVGGKERGR 307
            P+GRCIQS  Y               EDG G++ ++          E  Y +  + + +R TF T HGR VRDGGGVE D KV   +AS LE+ L   G++ ++A EWS  H  T    V        DATY++F  YV +++K+G ++ +VL+   L+ L+  L A+++  A + L+ L+A +  E  ++F T++ ++ E++EQ ILARY PES+L    L+ D QV+   + +K       GK+        G  RE    Q+A  G E  +
Sbjct:  708 PSGRCIQSTVY---------------EDG-GRSDNAEAS-----SSEIKYKSTKVADKDRTTFLTAHGREVRDGGGVEVDFKVEPRKASPLEIILLNSGMYSNYAAEWSKHHELTDNFKVD-------DATYKDFQRYVEKRQKDGDIKLEVLYESQLKELQKKLKASKFASASRELEKLRADIIAETKKDFTTYRNEVVEDLEQNILARYLPESMLIERGLKSDVQVEETAKMLK------NGKQFDTLLSRDGSSREKTGTQRASDGYETAK 947          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|1210519557|dbj|GAX21681.1| (hypothetical protein FisN_29Hh122 [Fistulifera solaris])

HSP 1 Score: 147.132 bits (370), Expect = 5.924e-35
Identity = 79/241 (32.78%), Postives = 134/241 (55.60%), Query Frame = 0
Query:   34 PTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGR-PLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGGR 273
            P+GRCIQ V Y            G  ++G G+ K                    + E +R T+YT  GR+V+DGGG+EAD++V AP+AS LEV+L + G+F DFA  WS  H  T        +  +V D TY++F+ YV  ++++G++  + L++  L  L+  L  + Y  A K ++ L+A +  ++  +FN ++  + E++ Q+IL+RY PES+L    ++ D QV+ A++ ++  G+
Sbjct:  511 PSGRCIQGVNYKQ----------GDNDNGFGRQK--------------------VAERDRATYYTRMGRLVKDGGGIEADVRVDAPKASALEVTLLRSGIFNDFAALWSQNHKLTDYVNADTKKLDVVNDDTYKQFIAYVKEQQQQGNLELESLYSKPLTDLKKTLKQSGYLGAEKSVEQLQARIVRDIESDFNKYRKDLMEDLSQSILSRYLPESMLIERGVQNDVQVQAAMQLLQTPGK 721          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|1210526413|dbj|GAX14901.1| (carboxyl-terminal processing protease [Fistulifera solaris])

HSP 1 Score: 147.132 bits (370), Expect = 7.190e-35
Identity = 80/241 (33.20%), Postives = 133/241 (55.19%), Query Frame = 0
Query:   34 PTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGR-PLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGGR 273
            P+GRCIQ V Y            G  ++G GK K                    + E +R T+YT  GR+V+DGGG+EAD++V AP+AS LEV+L + G+F DFA  WS  H  T        +  +V D TY++F+ YV  ++++G++  + L++  L  L+  L  + Y  A K ++ L+A +  ++  +FN ++  + E++ Q+IL+RY PES+L    ++ D QV+ A+  ++  G+
Sbjct:  536 PSGRCIQGVNYKQ----------GDNDNGFGKQK--------------------VAERDRVTYYTRMGRLVKDGGGIEADVRVDAPKASALEVTLLRSGIFNDFAALWSQNHKLTDYVNADTKKLDVVNDDTYKQFIAYVKEQQQQGNLELESLYSKPLTDLKKTLKQSGYLGAEKSVEQLQARIVRDIESDFNKYRKDLMEDLSQSILSRYLPESMLIERGVQNDVQVQAAMRLLQTPGK 746          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|873233162|emb|CEM03607.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 131.339 bits (329), Expect = 1.646e-29
Identity = 88/262 (33.59%), Postives = 129/262 (49.24%), Query Frame = 0
Query:   34 PTGRCIQSVRYS------------SPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKG------YLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTAL------DATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEG 271
            P+GRCIQSV+YS            +P     G     +E+  G +    Q RR G  R K       YL+++I ESER+ F T  GR VRDGGG+EAD+KV  P+ S LE++L  QG  FD+A EWS  + Y      Q       D  Y  F  +V  + K G ++ D L+   L  L T L      D +  K   KG+  L+  + +E+  +F  +  ++K ++  AI  RY P++L     L+ DP V  A++ ++  
Sbjct:  406 PSGRCIQSVKYSEGGVNMADASTTTPNEDTQGTPTAPQENNNGPSTTDPQSRRNG--RRKADDSDLRYLSDEISESERKVFKTRGGRYVRDGGGIEADVKVNLPKTSPLEITLISQGAMFDYAAEWSKFNEYRGEIDSQ------IDDIYDAFQGWVLERVKSGKIKLDTLYASQLNDLGTLLKELDRSDQSYTKAVEKGIQQLREDLAKEIKNDFVRNAKELKLDLADAIKQRYLPDTLRLSQNLQYDPMVATAIKLLQNN 659          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|873232578|emb|CEM05181.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 129.413 bits (324), Expect = 8.489e-29
Identity = 86/260 (33.08%), Postives = 127/260 (48.85%), Query Frame = 0
Query:   34 PTGRCIQSVRYS------------SPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKG----YLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTAL------DATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEG 271
            P+GRCIQSV+YS            +P     G     +E   G +    Q RR G  +       YL+++I ESER+ F T  GR VRDGGG+EAD+KV  P+ S LE++L  QG  FD+A EWS  + Y      Q       D  Y  F  +V  + K G ++ D L+   L  L T L      D +  K   KG+  L+  + +E+  +F  +  ++K ++  AI  RY P++L     L+ DP V  A++ ++  
Sbjct:  622 PSGRCIQSVKYSEGGVNMADASTTTPNEDTQGTPTAPQETINGPSTTDPQSRRNGRRKTDDSDLRYLSDEISESERKVFKTRGGRYVRDGGGIEADVKVNLPKTSPLEITLISQGAMFDYAAEWSKFNEYRGEIDSQ------IDDIYDAFQGWVLERVKSGKIKLDTLYASQLNDLGTLLKELDRSDQSYTKAVEKGIQQLREDLAKEIKNDFVRNAKELKLDLADAIKQRYLPDTLRLSQNLQYDPMVATAIKLLQNN 875          
BLAST of EWM21667.1 vs. NCBI_GenBank
Match: gi|397568775|gb|EJK46335.1| (hypothetical protein THAOC_34996 [Thalassiosira oceanica])

HSP 1 Score: 126.716 bits (317), Expect = 7.012e-28
Identity = 80/264 (30.30%), Postives = 124/264 (46.97%), Query Frame = 0
Query:   34 PTGRCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDG----------------------------GGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVK 269
            P+GRCIQS  Y            G  +D A    D            + Y +  + + +R  FYT HGRVV+DG                            GGVE D K    +AS LEV L   G + DFA EWS  H  T    V E        TYQ+F  ++ +++  G ++ +VL++  L  L+  L A+++  + + LD L+A + ++V ++F  +K +I E++EQ IL+RY P+S++    L+ D QV    + +K
Sbjct:  557 PSGRCIQSTEYKEG---------GRGDDAASSLSDG----------TRSYKSRKVADKDRSIFYTAHGRVVKDGVSVLDYACLSHSPSNSSSALTRILETYQGGVEVDYKAEPQKASPLEVILLNTGAYADFAAEWSKTHELTDNFKVDE-------TTYQDFQRFIQKRQDSGDMKLEVLYDLPLRDLQKKLKASKFDSSSRELDKLRADIIKDVKQDFTKYKKEIIEDLEQTILSRYLPDSMVIARGLKNDVQVAETAKLLK 794          
The following BLAST results are available for this feature:
BLAST of EWM21667.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101932|gb|EWM21667.1|0.000e+0100.00carboxyl-terminal protease, partial [Nannochlorops... [more]
gi|298706117|emb|CBJ29210.1|1.694e-4238.49carboxy-terminal peptidase [Ectocarpus siliculosus... [more]
gi|219128277|ref|XP_002184343.1|7.529e-4138.30predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072231001|gb|OEU15734.1|3.764e-4036.74Peptidase_S41-domain-containing protein [Fragilari... [more]
gi|224004336|ref|XP_002295819.1|3.538e-3533.94predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210519557|dbj|GAX21681.1|5.924e-3532.78hypothetical protein FisN_29Hh122 [Fistulifera sol... [more]
gi|1210526413|dbj|GAX14901.1|7.190e-3533.20carboxyl-terminal processing protease [Fistulifera... [more]
gi|873233162|emb|CEM03607.1|1.646e-2933.59unnamed protein product [Vitrella brassicaformis C... [more]
gi|873232578|emb|CEM05181.1|8.489e-2933.08unnamed protein product [Vitrella brassicaformis C... [more]
gi|397568775|gb|EJK46335.1|7.012e-2830.30hypothetical protein THAOC_34996 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9035rna9035Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications