EWM21740.1, cds8936 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|585102068|gb|EWM21739.1| (thioredoxin [Nannochloropsis gaditana] >gi|585102069|gb|EWM21740.1| thioredoxin [Nannochloropsis gaditana]) HSP 1 Score: 762.296 bits (1967), Expect = 0.000e+0 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0 Query: 1 MPVPFLHSFPSMPRNPSHALLKPSYSASLLVSLTRSQRFMNSRLFAVSACRRAVSARQRQPTSTVSRIALRGLASSKHPPSSPPPPQGMGANGLIGLPPNPRPPPSRKPSQPTPTPATARMPSVIEVDVKNFVALLKSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVRKRGRKWGREGWVGRNLCGNHSRQPLPRRRSGRPSPSSKWP 377 MPVPFLHSFPSMPRNPSHALLKPSYSASLLVSLTRSQRFMNSRLFAVSACRRAVSARQRQPTSTVSRIALRGLASSKHPPSSPPPPQGMGANGLIGLPPNPRPPPSRKPSQPTPTPATARMPSVIEVDVKNFVALLKSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVRKRGRKWGREGWVGRNLCGNHSRQPLPRRRSGRPSPSSKWP Sbjct: 1 MPVPFLHSFPSMPRNPSHALLKPSYSASLLVSLTRSQRFMNSRLFAVSACRRAVSARQRQPTSTVSRIALRGLASSKHPPSSPPPPQGMGANGLIGLPPNPRPPPSRKPSQPTPTPATARMPSVIEVDVKNFVALLKSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVRKRGRKWGREGWVGRNLCGNHSRQPLPRRRSGRPSPSSKWP 377
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|639280491|ref|WP_024583113.1| (MULTISPECIES: thioredoxin [Bradyrhizobium] >gi|758542513|gb|KIU50104.1| thioredoxin [Bradyrhizobium elkanii] >gi|1052228460|gb|OCX31364.1| thioredoxin [Bradyrhizobium sp. UASWS1016]) HSP 1 Score: 117.087 bits (292), Expect = 1.718e-26 Identity = 78/231 (33.77%), Postives = 119/231 (51.52%), Query Frame = 0 Query: 111 QPTPTPATARMPSVI-EVDVKNFVALLKSPV---PVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVR 337 Q PTP A P +I E + FV + PV++D +A WC PC++LTP+LE+ V GR+ L K+++D+H ++ Q+ + S+PAV G+ D F+G E L F+DK+ +P + GEP+ E +L ADA+L EG E + Q+Y E+ D AT + A LAGLA+C + GA E+AK+ + M+ + D V+ Sbjct: 6 QGGPTPQAA--PDLIKETTTQTFVKDVIEESRRQPVLIDFWAPWCGPCRQLTPMLEKAVRNAKGRVKLVKMNIDDHPQIPGQMGIQSIPAVIAFVNGQPADGFMGAVPESQLNAFIDKITKGVPAA------GEPNLTE----ILAEADAVLAEGDAEAAA------------QIYAEVLAHD--ATNIAA--LAGLAKCYMTSGAVEQAKQTLAMVPESKRNDAAVKAVQ 208
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|852217423|ref|WP_048307790.1| (co-chaperone YbbN [Halomonas sp. PR-M31]) HSP 1 Score: 116.316 bits (290), Expect = 3.391e-26 Identity = 82/249 (32.93%), Postives = 128/249 (51.41%), Query Frame = 0 Query: 100 NPR---PPPSRKPSQPTPTPATARMPSVIEVDVKNFVALL---KSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSI---IPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVRKR 339 +PR P S + SQ T + T +I+VD+ NF ++ + +PV+LDC+A WC+PCK LTP+LE++ +Y G +LAKL+++ HQ++A+QL + S+P V + +G+L D+F G E + +L + + IP SP E+ EA L D AT A A+Y+Q+ +E + Y + GLA L G+ EEAK L+ L +H+ + VR R Sbjct: 5 DPRSGVPLTSSESSQQTGSSNTDPSTYIIDVDMTNFQQVVLEGSTTLPVLLDCWAPWCEPCKTLTPILEKLAKEYAGAFVLAKLNIEEHQQIASQLGIRSVPDVKLISQGQLYDQFQGALPEKQIREWLAQYIEAPQEIPA----------SPEEQAEAALAVGD---------------ATSARAIYQQLVQEYPE------YHDYQI--GLASAVLAEGSPEEAKTLLDNLPPEHREGAKARGVRAR 220
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|1089507910|emb|SED62334.1| (thioredoxin [Bradyrhizobium erythrophlei]) HSP 1 Score: 116.316 bits (290), Expect = 3.692e-26 Identity = 78/231 (33.77%), Postives = 120/231 (51.95%), Query Frame = 0 Query: 111 QPTPTPATARMPSVI-EVDVKNFVALLKSPV---PVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVR 337 Q PTP A P +I E + FV + PV++D +A WC PC++LTP+LE+ V GR+ L K+++D H ++ Q+ + S+PAV G+ D F+G E + F++K+ +P + GEP+ AE +L ADA+L EG EG + Q+Y E+ D AT + A LAGLA+C + GA E+AK+ + M+ + D V+ Sbjct: 6 QGGPTPEAA--PDLIKETTTQTFVKDVIEESRRQPVMIDFWAPWCGPCRQLTPMLEKAVRNAKGRVKLVKMNIDEHPQIPGQMGIQSIPAVIAFVNGQPADGFMGAVPESQINAFIEKITKGVPAA------GEPNLAE----ILAEADAVLAEGDVEGAA------------QIYAEVLAHD--ATNIAA--LAGLAKCYVTSGAVEQAKQTLAMVPESKRNDAAVKAVQ 208
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|656042233|ref|WP_029080927.1| (thioredoxin [Bradyrhizobium sp. th.b2]) HSP 1 Score: 116.316 bits (290), Expect = 3.692e-26 Identity = 78/231 (33.77%), Postives = 119/231 (51.52%), Query Frame = 0 Query: 111 QPTPTPATARMPSVI-EVDVKNFVALLKSPV---PVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVR 337 Q PTP A P +I E + FV + PV++D +A WC PC++LTP+LE+ V GR+ L K+++D H ++ Q+ + S+PAV G+ D F+G E + F+DK+ +P + GEP+ AE +L ADA+L EG E + Q+Y E+ D AT + A LAGLA+C + GA E+AK+ + M+ + D V+ Sbjct: 6 QGGPTPQAA--PDLIKETTTQTFVKDVIEESRRQPVMIDFWAPWCGPCRQLTPMLEKAVRNAKGRVKLVKMNIDEHPQIPGQMGIQSIPAVIAFVNGQPADGFMGAVPESQVNAFIDKITKGVPAA------GEPNLAE----ILAEADAVLAEGDAEAAA------------QIYAEVLAHD--ATNIAA--LAGLAKCYMTTGAVEQAKQTLAMVPESKRNDAAVKAVQ 208
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|1141026901|ref|WP_076863355.1| (thioredoxin [Bradyrhizobium mercantei]) HSP 1 Score: 114.005 bits (284), Expect = 2.631e-25 Identity = 78/231 (33.77%), Postives = 118/231 (51.08%), Query Frame = 0 Query: 111 QPTPTPATARMPSVI-EVDVKNFVALLKSPV---PVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVR 337 Q PTP A P +I E + FV + PV++D +A WC PC++LTP+LE+ V GR+ L K+++D H ++ Q+ + S+PAV G+ D F+G E L F++K+ +P + GEP+ AE +L ADA+L EG A Q+Y E+ D AT + A LAGLA+C + GA E+AK+ + M+ + D V+ Sbjct: 6 QGGPTPQAA--PDLIKETTTQTFVKDVIEESRRQPVLIDFWAPWCGPCRQLTPMLEKAVNNAKGRVKLVKMNIDEHPQIPGQMGIQSIPAVIAFVNGQPADGFMGAVPESQLNAFIEKITKGVPAA------GEPNLAE----ILAEADAVLAEGD------------AAQAAQIYAEVLAHD--ATNIAA--LAGLAKCYVTSGAVEQAKQTLAMVPESKRNDAAVKAVQ 208
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|667763673|ref|WP_031384737.1| (co-chaperone YbbN [Halomonas zincidurans]) HSP 1 Score: 113.235 bits (282), Expect = 5.342e-25 Identity = 74/219 (33.79%), Postives = 119/219 (54.34%), Query Frame = 0 Query: 124 VIEVDVKNFVALL---KSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVRKR 339 +++VD+ NF ++ +PV+LDC+A WC+PCK LTPVLE++ +Y G +LAKL+++++Q++AAQL + S+P V + +G+L D+F G E + +L + LS P + E SP E+ EA L G++AT R +YE+L +D P + GLA + G +EA+ L+ L +H+ +T VR R Sbjct: 30 IVDVDMSNFQQVVLEGSMQIPVVLDCWAPWCEPCKSLTPVLEKLAHEYAGSFVLAKLNIEDNQQIAAQLGIRSVPDVKLIMQGQLYDQFQGALPEKQIRDWLGQYLS-APQDA------EASPEEQAEAAL--------------ADGDSATA-----RAIYEQL-VQDYPDYH---DYQIGLASALVGEGRADEARALLDNLPPEHRDAAKTRGVRAR 218
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|505412869|ref|WP_015599971.1| (co-chaperone YbbN [Hyphomicrobium denitrificans] >gi|484583924|gb|AGK59957.1| thioredoxin [Hyphomicrobium denitrificans 1NES1]) HSP 1 Score: 112.849 bits (281), Expect = 5.882e-25 Identity = 72/216 (33.33%), Postives = 109/216 (50.46%), Query Frame = 0 Query: 108 KPSQPTPTPATARMPSVIEVDVKNFVALLKSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGML 323 K S P A + K+ V PVI+D +ASWC PCK+LTP++E++V Y G++ LAK++VD +Q +AAQL V SLP V +G+ +D FVG E + F+D++++ G GE +LK A+ LL +G +G + +V+ + +ED A LAGLA C LR G AK+ + ++ Sbjct: 6 KKSGPGTAGAGDVIKDTTSASFKSDVIDASKSTPVIVDFWASWCGPCKQLTPLIEKVVRSYSGKVRLAKVNVDENQAIAAQLRVQSLPTVLAFRDGQPIDGFVGAQPEGAVKAFVDRLIA----DDADLGLGE---------LLKSAEDLLEQGDLQGAA------------EVFATVLQEDRS----NAEALAGLASCYLRSGDTTRAKQTLALV 192
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|654900826|ref|WP_028352287.1| (MULTISPECIES: thioredoxin [Bradyrhizobium]) HSP 1 Score: 112.849 bits (281), Expect = 6.764e-25 Identity = 77/231 (33.33%), Postives = 118/231 (51.08%), Query Frame = 0 Query: 111 QPTPTPATARMPSVI-EVDVKNFVALLKSPV---PVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVR 337 Q PTP A P +I E + FV + PV++D +A WC PC++LTP+LE+ V GR+ L K+++D H ++ Q+ + S+PAV G+ D F+G E + F++K+ +P + GEP+ AE +L ADA+L EG A Q+Y E+ D AT + A LAGLA+C + GA E+AK+ + M+ + D V+ Sbjct: 6 QGGPTPEAA--PDLIKETTTQTFVKDVIEESRRQPVMIDFWAPWCGPCRQLTPILEKAVRNAKGRVKLVKMNIDEHPQIPGQMGIQSIPAVIAFVNGQPADGFMGAVPESQVNAFIEKITKGVPAA------GEPNLAE----ILAEADAVLAEGD------------AAQAAQIYAEVLAHD--ATNIAA--LAGLAKCYVTSGAMEQAKQTLAMVPESKRNDAAVKAVQ 208
BLAST of EWM21740.1 vs. NCBI_GenBank
Match: gi|1027763893|ref|WP_063695699.1| (thioredoxin [Bradyrhizobium embrapense]) HSP 1 Score: 112.849 bits (281), Expect = 7.563e-25 Identity = 74/231 (32.03%), Postives = 116/231 (50.22%), Query Frame = 0 Query: 111 QPTPTPATARMPSVI-EVDVKNFVALLKSPV---PVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEGKGEPSPAEKQEAVLKRADALLTEGTKEGGSGETATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETMPVR 337 Q PTP A P +I E + FV + PV++D +A WC PC++LTP+LE+ V GR+ L K+++D H ++ Q+ + S+PAV G+ D F+G E + F++K+ +P + GEP+ AE +L ADA+L EG EG + Q+Y E+ D + LAGLA+C + GA E+AK+ + + + D V+ Sbjct: 6 QGGPTPQAA--PDLIKETTTQTFVKDVIEESRRQPVMIDFWAPWCGPCRQLTPMLEKAVRNAKGRVKLVKMNIDEHPQIPGQMGIQSIPAVIAFVNGQPADGFMGAVPESQINAFIEKITKGVPAA------GEPNLAE----ILAEADAVLAEGDVEGAA------------QIYAEVLAHDA----INIAALAGLAKCYVTSGAVEQAKQTLATVPEAKRNDAAVKAVQ 208 The following BLAST results are available for this feature:
BLAST of EWM21740.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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