EWM21743.1, cds8926 (CDS) Nannochloropsis gaditana

Overview
NameEWM21743.1
Unique Namecds8926
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:573577..573915 +
Alignment locationKK037250.1:574000..574011 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21743.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100303g3.772.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:573577..573915 +
KK037250.1supercontigKK037250.1:574000..574011 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21743.1 vs. NCBI_GenBank
Match: gi|585102074|gb|EWM21743.1| (hypothetical protein Naga_100303g3 [Nannochloropsis gaditana])

HSP 1 Score: 242.276 bits (617), Expect = 2.952e-81
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
Query:    1 MAREAALPLRRPGIHAAFGQIKKDQMPYHGGHQLHADLFKRIFGFRCFNGTRGCNPRGHGQWSTAAEHRNSIYSDAPTLSSSSGRPALQLFHHPCDTFNTFMQGRRLVFRRSQLKS 116
            MAREAALPLRRPGIHAAFGQIKKDQMPYHGGHQLHADLFKRIFGFRCFNGTRGCNPRGHGQWSTAAEHRNSIYSDAPTLSSSSGRPALQLFHHPCDTFNTFMQGRRLVFRRSQLKS
Sbjct:    1 MAREAALPLRRPGIHAAFGQIKKDQMPYHGGHQLHADLFKRIFGFRCFNGTRGCNPRGHGQWSTAAEHRNSIYSDAPTLSSSSGRPALQLFHHPCDTFNTFMQGRRLVFRRSQLKS 116          
BLAST of EWM21743.1 vs. NCBI_GenBank
Match: gi|553183035|ref|XP_005853830.1| (hypothetical protein NGA_0487200, partial [Nannochloropsis gaditana CCMP526] >gi|422295234|gb|EKU22533.1| hypothetical protein NGA_0487200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 186.422 bits (472), Expect = 2.923e-58
Identity = 87/91 (95.60%), Postives = 87/91 (95.60%), Query Frame = 0
Query:   26 MPYHGGHQLHADLFKRIFGFRCFNGTRGCNPRGHGQWSTAAEHRNSIYSDAPTLSSSSGRPALQLFHHPCDTFNTFMQGRRLVFRRSQLKS 116
            MPYHGGHQLHADLFKRIFGFRCFNGTRGCNPRGHGQWSTA EHRN IYSDAPTLSSSSGRPALQLFHHPCDTFNTFMQGRRLVFRRSQ  S
Sbjct:    1 MPYHGGHQLHADLFKRIFGFRCFNGTRGCNPRGHGQWSTAVEHRNGIYSDAPTLSSSSGRPALQLFHHPCDTFNTFMQGRRLVFRRSQRSS 91          
The following BLAST results are available for this feature:
BLAST of EWM21743.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102074|gb|EWM21743.1|2.952e-81100.00hypothetical protein Naga_100303g3 [Nannochloropsi... [more]
gi|553183035|ref|XP_005853830.1|2.923e-5895.60hypothetical protein NGA_0487200, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8956rna8956Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications