EWM21750.1, cds8920 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|585102082|gb|EWM21750.1| (dihydroxy-3-keto-5-methylthiopentene dioxygenase [Nannochloropsis gaditana]) HSP 1 Score: 462.225 bits (1188), Expect = 5.797e-165 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 Query: 1 MQSFQAFVAVYSAPAHRSIMLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNRCVIRAELSSAAAANGRMRGFNKFCFSAKNPHNVAESQA 218 MQSFQAFVAVYSAPAHRSIMLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNRCVIRAELSSAAAANGRMRGFNKFCFSAKNPHNVAESQA Sbjct: 1 MQSFQAFVAVYSAPAHRSIMLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNRCVIRAELSSAAAANGRMRGFNKFCFSAKNPHNVAESQA 218
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|553191094|ref|XP_005855319.1| (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Nannochloropsis gaditana CCMP526] >gi|422293738|gb|EKU21038.1| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 346.28 bits (887), Expect = 4.845e-117 Identity = 161/170 (94.71%), Postives = 162/170 (95.29%), Query Frame = 0 Query: 20 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNRCVIRAELSS 189 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSY+DSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYN SS Sbjct: 1 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYKDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNSTSTHLITSS 170
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|632972969|ref|XP_007902920.1| (PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Callorhinchus milii]) HSP 1 Score: 229.18 bits (583), Expect = 2.081e-73 Identity = 102/161 (63.35%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 20 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNR 180 ML AWYMDD + DQR+ H+L+PNKP +L+ L+ LGVL+W +AD YED PE +R ER Y + D T+ ++T+PNYEEKIKSF+EEHIH DEEIRY +DGSGYFDVRD +++WIRI ++K DLI LP GIYHRFTLD+ NY KA+RLF G P+WTPY R Sbjct: 1 MLQAWYMDD-SAEDQRKPHKLEPNKPVSLQQLEPLGVLYWKLNADKYEDDPELQKIRKERNYSWMDIITIHKDTLPNYEEKIKSFFEEHIHLDEEIRYIIDGSGYFDVRDKEEQWIRIAMQKGDLITLPAGIYHRFTLDDNNYTKAMRLFVGDPVWTPYAR 160
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|971514206|dbj|GAQ83993.1| (Uncharacterized conserved protein [Klebsormidium nitens]) HSP 1 Score: 230.72 bits (587), Expect = 2.236e-73 Identity = 105/161 (65.22%), Postives = 123/161 (76.40%), Query Frame = 0 Query: 22 DAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNRCV 182 +AWYMDD + DQR H+L+PN+P + E L LGV+HW DAD YE PE +R +R Y Y+D TVS + +PNYE KIKSF+EEHIH+DEEIRYCLDGSGYFDVRD D+WIRI V K D+IVLP G+YHRFTLD NYIKALRLF G P+WTP NR V Sbjct: 35 EAWYMDD-SDADQRWSHKLEPNQPVSREQLAELGVVHWVLDADKYETDPELQQIRKDRNYSYQDLITVSPDKLPNYEVKIKSFFEEHIHTDEEIRYCLDGSGYFDVRDANDKWIRILVRKGDMIVLPAGMYHRFTLDENNYIKALRLFVGEPVWTPINRPV 194
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|1211446580|ref|XP_021509242.1| (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Meriones unguiculatus] >gi|1211446590|ref|XP_021509247.1| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Meriones unguiculatus]) HSP 1 Score: 227.254 bits (578), Expect = 2.758e-72 Identity = 100/163 (61.35%), Postives = 127/163 (77.91%), Query Frame = 0 Query: 18 SIMLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNR 180 + M+ AWYMD+ +T D R HR +P++P LE L+TLGVL+W DAD YE+ PE +R ER Y + D T+ ++T+PNYEEKIK F+EEH+H DEEIRY L+GSGYFD+RD +D+WIRI +EK D+I LP GIYHRFTLD KNY+KA+RLF G P+WTPYNR Sbjct: 25 TTMVQAWYMDE-STADPRMPHRAQPDRPVGLEQLRTLGVLYWKLDADKYENDPELEKIRRERNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDIRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNR 186
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|19527270|ref|NP_598813.1| (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Mus musculus] >gi|78099011|sp|Q99JT9.1|MTND_MOUSE RecName: Full=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; AltName: Full=Acireductone dioxygenase (Fe(2+)-requiring); Short=ARD; Short=Fe-ARD; AltName: Full=Membrane-type 1 matrix metalloproteinase cytoplasmic tail-binding protein 1; Short=MTCBP-1 >gi|1004172041|pdb|5I8S|A Chain A, Structure Of Mouse Acireductone Dioxygenase With Ni2+ Ion And Pentanoic Acid In The Active Site >gi|1004172042|pdb|5I8T|A Chain A, Structure Of Mouse Acireductone Dioxygenase With Ni2+ Ion And D-lactic Acid In The Active Site >gi|1004172043|pdb|5I8Y|A Chain A, Strcuture Of Mouse Acireductone Dioxygenase Bound To Co2+ And 2-keto- 4-(methylthio)-butyric Acid >gi|1004172044|pdb|5I91|A Chain A, Structure Of Mouse Acirecutone Dioxygenase With To Ni2+ And 2-keto-4- (methylthio)-butyric Acid In The Active Site >gi|1004172045|pdb|5I93|A Chain A, Structure Of Mouse Acireductone Dioxygenase With Ni2+ And 2- Ketopentanoic Acid In The Active Site >gi|13543034|gb|AAH05695.1| Adi1 protein [Mus musculus] >gi|74219077|dbj|BAE26682.1| unnamed protein product [Mus musculus]) HSP 1 Score: 226.483 bits (576), Expect = 2.868e-72 Identity = 100/161 (62.11%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 20 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNR 180 M+ AWYMD+ +T D R+ HR +P++P +LE L+TLGVL+W DAD YE+ PE +R R Y + D T+ ++T+PNYEEKIK F+EEH+H DEEIRY L+GSGYFDVRD +D+WIRI +EK D+I LP GIYHRFTLD KNY+KA+RLF G P+WTPYNR Sbjct: 1 MVQAWYMDE-STADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNR 160
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|1195682460|ref|XP_021034707.1| (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Mus caroli]) HSP 1 Score: 226.483 bits (576), Expect = 3.063e-72 Identity = 100/161 (62.11%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 20 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNR 180 M+ AWYMD+ +T D R+ HR +P++P +LE L+TLGVL+W DAD YE+ PE +R R Y + D T+ ++T+PNYEEKIK F+EEH+H DEEIRY L+GSGYFDVRD +D+WIRI +EK D+I LP GIYHRFTLD KNY+KA+RLF G P+WTPYNR Sbjct: 1 MVQAWYMDE-STADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNR 160
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|1195554169|ref|XP_021057984.1| (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Mus pahari]) HSP 1 Score: 226.098 bits (575), Expect = 3.569e-72 Identity = 100/161 (62.11%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 20 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNR 180 M+ AWYMD+ +T D R+ HR +P++P +LE L+TLGVL+W DAD YE+ PE +R R Y + D T+ ++T+PNYEEKIK F+EEH+H DEEIRY L+GSGYFDVRD +D+WIRI +EK D+I LP GIYHRFTLD KNY+KA+RLF G P+WTPYNR Sbjct: 1 MVQAWYMDE-STADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNR 160
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|302765409|ref|XP_002966125.1| (hypothetical protein SELMODRAFT_230764 [Selaginella moellendorffii] >gi|300165545|gb|EFJ32152.1| hypothetical protein SELMODRAFT_230764 [Selaginella moellendorffii]) HSP 1 Score: 224.557 bits (571), Expect = 1.383e-71 Identity = 104/160 (65.00%), Postives = 123/160 (76.88%), Query Frame = 0 Query: 21 LDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNR 180 ++AWYMDD ++ DQR+ H L P + + E L LGVLHW DAD YE + +R +RGY Y+D TVS E +PNYE+KI+SF+EEHIH DEEIRYCLDGSGYFDVRD DRWIRI V+K D+IVLP G YHRFTLDN NYIKA+RLF G P+WTPYNR Sbjct: 1 MEAWYMDD-SSEDQRQPHHLNPVQLVSHEKLAALGVLHWNLDADRYETDSKLQEIRKKRGYSYQDIITVSPEKLPNYEQKIRSFFEEHIHLDEEIRYCLDGSGYFDVRDLGDRWIRIWVKKGDMIVLPAGSYHRFTLDNSNYIKAMRLFVGEPVWTPYNR 159
BLAST of EWM21750.1 vs. NCBI_GenBank
Match: gi|553727084|ref|NP_001272956.1| (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Loxodonta africana]) HSP 1 Score: 224.172 bits (570), Expect = 2.339e-71 Identity = 100/161 (62.11%), Postives = 126/161 (78.26%), Query Frame = 0 Query: 20 MLDAWYMDDDTTMDQREEHRLKPNKPATLEDLQTLGVLHWTFDADSYEDSPEFAAMRAERGYDYEDTCTVSRETMPNYEEKIKSFYEEHIHSDEEIRYCLDGSGYFDVRDGQDRWIRIKVEKNDLIVLPEGIYHRFTLDNKNYIKALRLFKGVPIWTPYNR 180 M++AWYMD+ + DQR+ HRL+P++P LE L+ LGV +W DAD YE+ PE +R ER Y + D T+S++ +PNYEEKIK FYEEH+H D+EIRY LDGSGYFDVRD +D+WIRI +EK D+I LP GIYHRFTLD KNY+KA+RLF G P+WT YNR Sbjct: 1 MVEAWYMDE-SADDQRKPHRLEPDRPVGLEQLRQLGVFYWKLDADKYENDPELEKIRKERNYSWTDIITISKDKLPNYEEKIKMFYEEHLHLDDEIRYILDGSGYFDVRDKEDKWIRIFMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTAYNR 160 The following BLAST results are available for this feature:
BLAST of EWM21750.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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