EWM21764.1, cds8908 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21764.1 vs. NCBI_GenBank
Match: gi|585102097|gb|EWM21763.1| (hypothetical protein Naga_100298g6 [Nannochloropsis gaditana] >gi|585102098|gb|EWM21764.1| hypothetical protein Naga_100298g6 [Nannochloropsis gaditana]) HSP 1 Score: 223.016 bits (567), Expect = 8.555e-74 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 Query: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYGATTR 108 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYGATTR Sbjct: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYGATTR 108
BLAST of EWM21764.1 vs. NCBI_GenBank
Match: gi|585102096|gb|EWM21762.1| (hypothetical protein Naga_100298g6 [Nannochloropsis gaditana]) HSP 1 Score: 214.542 bits (545), Expect = 1.875e-70 Identity = 104/108 (96.30%), Postives = 104/108 (96.30%), Query Frame = 0 Query: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYGATTR 108 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSY T Sbjct: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYDVGTE 108
BLAST of EWM21764.1 vs. NCBI_GenBank
Match: gi|953499933|emb|CEG38574.1| (hypothetical protein PHALS_08638 [Plasmopara halstedii]) HSP 1 Score: 56.6102 bits (135), Expect = 4.607e-8 Identity = 23/62 (37.10%), Postives = 38/62 (61.29%), Query Frame = 0 Query: 13 CCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDK 74 C IFS IGF+FL+++G ++ QPI++H P+ A +C+ A +YA + +C W +K Sbjct: 7 CGTIFSFIGFVFLVVVGCLLKLQPIYIHNAKTPNSGANSCFEAAMLYAVAMGVCYTLWRKEK 68
BLAST of EWM21764.1 vs. NCBI_GenBank
Match: gi|673021756|ref|XP_008864839.1| (hypothetical protein H310_02923 [Aphanomyces invadans] >gi|574479770|gb|ETW06764.1| hypothetical protein H310_02923 [Aphanomyces invadans]) HSP 1 Score: 55.4546 bits (132), Expect = 1.124e-7 Identity = 26/78 (33.33%), Postives = 45/78 (57.69%), Query Frame = 0 Query: 13 CCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEE 90 CC IFS+ G FL+ +G ++ QP F+ V P SA +C+ AG+YAG ++ W ++ K +++ G +K++ Sbjct: 5 CCSIFSLAGTTFLLCMGALLRLQPEFIRDVHTPKSSANSCFVSAGLYAGVFVGSMILWRREQHVKG--SSSVGEIKDD 80
BLAST of EWM21764.1 vs. NCBI_GenBank
Match: gi|1210524972|dbj|GAX16164.1| (hypothetical protein FisN_3Hh355 [Fistulifera solaris]) HSP 1 Score: 55.0694 bits (131), Expect = 1.257e-7 Identity = 23/70 (32.86%), Postives = 36/70 (51.43%), Query Frame = 0 Query: 13 CCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAA 82 CC +S GFLF + +G++V QP F+ G+ + + +G G++ T + YD K KE AA Sbjct: 11 CCAFYSFTGFLFTLWVGVMVHSQPFFIAGIEDAEEARANAFGAMGMFLVTFFASIAGIWYDSKNKESVAA 80
BLAST of EWM21764.1 vs. NCBI_GenBank
Match: gi|154335619|ref|XP_001564048.1| (conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] >gi|731693341|ref|XP_010697950.1| hypothetical protein LPMP_181160 [Leishmania panamensis] >gi|134061079|emb|CAM38100.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] >gi|685203054|gb|AIN97297.1| hypothetical protein LPMP_181160 [Leishmania panamensis] >gi|1099053870|emb|CCM14502.1| hypothetical protein, conserved [Leishmania guyanensis]) HSP 1 Score: 53.1434 bits (126), Expect = 7.755e-7 Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 0 Query: 8 ECCAPCCGIFSIIGFLFLIILGIIVDKQPIF-----VHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYGAT 106 + CA CC +FS++G + L++ G + ++ I V + + A ACY GA IY TL L V+A +Y ++ +AA + EE L + S G+T Sbjct: 4 DSCATCCAVFSLLGIVHLVLFGRMFSEKAISFAIIAVENGWDGEKKAKACYNGAIIYTATLFLSVLARVYFRRNDAAKAALLYAQRAEEIQGLLVPPTLSTGST 107 The following BLAST results are available for this feature:
BLAST of EWM21764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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