rna8925, rna8925 (mRNA) Nannochloropsis gaditana

Overview
Namerna8925
Unique Namerna8925
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1465
Alignment locationKK037250.1:497353..498936 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100188g6.2457.mrna
Orig protein idgnl|cribi|Naga_100188g6.2457
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:497353..498936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100188g6gene8654Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8925rna8925-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21774.1cds8895Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8925 ID=rna8925|Name=rna8925|organism=Nannochloropsis gaditana|type=mRNA|length=1465bp
AGGCCCCGAGTATTTCACGGTCTCATGTGTCGTATCAGGCCGATATACAA
CTGTGCACGCTGTACGTGCCCTGTAGCGCGGAGGTGGAGAGTGTTCGAAC
ACGTCAAAAAGGATACGAGGAACCGAATTCGGAGCATTGCGATGAAGCCC
GTGCCGTAAATTATTAGTTAGTTCCAAATGGTATTCACCCTTTGACACGA
CCGCGCGAGCCACCCCGAGTATCGTATGCAGTGGTACTCCAACGTGTGAA
GCATGTATCCCGTGTCAAAGGATTGTTGGGGACCCTTGGCGTTTCTCGGT
TCAGTGATCTCCCGACACTGATCCTAAGTGCTCGCCTTCTTGTCCTTTCT
ATTTCCTACAGAGTCTTGCGCCTCCAGCATTCGCCCGCCAAGCCTGGTTC
ACATCCTAGGTCCCAGTATCATGATACGGTATTACATTCCTGGCGACGGG
GACGACGCGTCGCACCCAAACATCTTTCATCTCCCACCATCGGTCCAACA
ACCCCCCCGGTTGCGGGACGTTCGACAGCACTTCCCGCTCCCAGGCGGCT
ACCACTTCCGCTTTAAGACACGATTGGATGGAACCCCCGACAAGAAAGCG
GTCTGGATGGACGTCACGGAGGACGCGGCCGAGCTTCCTACTTTTGACGG
ATTTTACATAGCCAAGGTGTCACGGATGCGCATGGAAATGCCGAGCAAGC
CCACGGCGGCGGGGAGTACGGGTATGTCTTCTTCTTCCTCCTCCTCCCCC
ACGTCTGCGGGTTATTCCAGGACAAGCCAAGCCACAGGCCCAGTCTCAGC
GACCAGAGCGACTCCCTCCGCCTCCCAATCCCTGCCCCTTCGAGGCAACA
AGGGACTTGTGTCGCCGGCCTCCGACAATGATCCGTTCGGGCTCTTTCAC
GAAGCCCCTCCCTCGTCCTCCACCTCCTCCTCCTTCTCAAAGGCCCCAGC
GAGCGTGTCTGGGAACAGCAGTGCGCCCCACGCGACGACGAGCAGCAGCC
ACCCCGCGGCTCGCGGCCATCCACCGCACTCTACTCCAGGGCCACAGGAA
ATGTCTGGAGGAAGCAAGGTAGTTGCAGGGACGGCCGCTGGTGGGAAAGG
AGATTTACTAGATTTTGATGCCTTTGGCAGCCAACCGCCGGCTCCTTCAG
TGCCACCCATGAGGGGAGTGCCTCCCATGCGTGGAGTGAGTCCACCGCAG
CAGCCACAGCAGCGGCAGACGGGCTACCCTTCCTCGTCCAATGCGACCGG
GGGATGGATGTAAAGAGAGAGGTACGACTCCTAACAGGGAGTAAAGAGGA
GCCCAATAGAGGGCCGCTCCCGACGTCTGAACCAAAGCAAAATAGGGACC
ACGAAGAACACACTTCTTTGATCGGGTTCGCAGTCATTCAACATGTTATT
TAAACACGCGCCTTTGTACACTGTGGCTTTGTCGTTCGTCCTCCACATTT
CTCACCCTTTACTGT
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protein sequence of rna8925

>rna8925-protein ID=rna8925-protein|Name=rna8925|organism=Nannochloropsis gaditana|type=polypeptide|length=326bp
MQYAAWNKSTFVDILVLILKVIVAAALIGHAHHIKGEIQPEPVYGVLDDP
TYAYSAEAATDMLVRVSWIAGGYVMVASAIGLIGRCLHAAPLYGVYYCAN
IFGFAVCLTAAIIPTVWGTTRKGLCLAAEASCLAVEDLSLCPYPVSSFAT
QTRQRVLADPTEGVSGAEGAVTMASSSPCCYLPSFLFFCEHFFGAVYTQT
VIAVVLLALVMTQSMISCCYLCCDCDRPWTSKGRLPDIPELPTFVPPGGL
PGRFSLHKVGEPLKPGRDSQAVKGRRRTREDGRRLSSLDKAGPAVQEGGE
GEDSAEGGAGEKGSRCAEERKEDSKG
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mRNA from alignment at KK037250.1:497353..498936-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8925 ID=rna8925|Name=rna8925|organism=Nannochloropsis gaditana|type=mRNA|length=1584bp|location=Sequence derived from alignment at KK037250.1:497353..498936- (Nannochloropsis gaditana)
AGTGGTGTTTCCGGCCGTTTGCCCAGTATTTCTCTTCGCGACCTCGCATG
CTCGCTGGCCCCTGCCGATCGATCCATTAAATCCTCATAGCGCCCTGACG
CCTACATACCAGTGGTCCCAAGCCCCCACACGACGTTTCGACACGGTTCC
CATTGCTCATTGCCTGTCCTCAACGTTCCTAGGTTGTCATTGCCAGGTAT
CCACACATATTGGTGCGTGCGACCGCTGTCGACGGCAGATGCAGTATGCG
GCTTGGAACAAGTCAACATTCGTAGATATACTTGTTTTAATTCTCAAAGT
CATAGTGGCCGCCGCATTGATTGGCCATGCTCATCACATTAAAGGGGAAA
TCCAACCTGAACCTGTGTACGGGGTCCTTGACGACCCTACCTACGCCTAC
AGTGCAGAAGCCGCAACTGACATGCTGGTCCGTGTCAGCTGGATTGCTGG
GGGTTATGTAATGGTAGCAAGCGCCATCGGGTTGATAGGGCGGTGCCTGC
ACGCTGCCCCTCTATATGGTGTCTACTACTGCGCCAATATTTTTGGCTTT
GCTGTATGCCTGACCGCAGCAATAATCCCAACAGTGTGGGGTACGACAAG
AAAAGGACTATGTCTGGCCGCTGAAGCCTCCTGCCTGGCTGTTGAGGATT
TGAGTCTGTGTCCTTATCCCGTCAGTTCTTTTGCCACTCAAACACGTCAG
CGGGTACTGGCCGATCCGACGGAAGGGGTCTCCGGGGCTGAAGGGGCTGT
GACAATGGCAAGTTCCAGTCCGTGTTGCTACTTGCCTTCGTTTTTATTCT
TCTGTGAACATTTTTTTGGGGCCGTGTACACGCAAACTGTAATCGCTGTT
GTCCTCCTCGCCCTAGTCATGACGCAGAGCATGATCTCTTGCTGCTATCT
GTGCTGTGACTGTGACCGGCGTAAGTATTTCGTCTGGGACTGGGAAACGG
CAAATCTTCCTGTCTGCTCTTCATCTCTCTTGTCGTGCGTCTTAGCTGCG
GCTCAGGCCTTTCAACCATTTGTCCCTCTGGGTATGTAGGGATGTAGCCG
TGCCTCTCAAAGCGACCCCCTCCACCTGCCGTCTCGATGCGGTGTGGCAG
TACACCCTTCCAGGCATGTGTGTACGTGCCTCCGCCCGCTTTTGCCTTCA
GGGGCCCTGACCGTTCATCCCACCATACCCCACAGCGTGGACATCCAAGG
GCCGTCTGCCAGACATCCCAGAGCTTCCCACGTTCGTTCCTCCGGGCGGT
CTGCCCGGTCGATTTTCTTTGCACAAGGTAGGCGAACCCTTAAAGCCGGG
GAGGGACAGTCAGGCTGTCAAAGGAAGAAGGAGGACAAGGGAGGATGGGA
GAAGACTTTCTTCGCTTGACAAAGCAGGTCCCGCGGTTCAAGAGGGGGGG
GAGGGGGAAGACAGCGCGGAGGGTGGTGCTGGGGAAAAAGGGTCCCGGTG
CGCAGAGGAGAGGAAGGAGGACAGTAAAGGGTGAGAAATGTGGAGGACGA
ACGACAAAGCCACAGTGTACAAAGGCGCGTGTTTAAATAACATGTTGAAT
GACTGCGAACCCGATCAAAGAAGTGTGTTCTTCG
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Coding sequence (CDS) from alignment at KK037250.1:497353..498936-

>rna8925 ID=rna8925|Name=rna8925|organism=Nannochloropsis gaditana|type=CDS|length=1962bp|location=Sequence derived from alignment at KK037250.1:497353..498936- (Nannochloropsis gaditana)
CGTGGACATCCAAGGGCCGTCTGCCAGACATCCCAGAGCTTCCCACGTTC
GTTCCTCCGGGCGGTCTGCCCGGTCGATTTTCTTTGCACAAGGTAGGCGA
ACCCTTAAAGCCGGGGAGGGACAGTCAGGCTGTCAAAGGAAGAAGGAGGA
CAAGGGAGGATGGGAGAAGACTTTCTTCGCTTGACAAAGCAGGTCCCGCG
GTTCAAGAGGGGGGGGAGGGGGAAGACAGCGCGGAGGGTGGTGCTGGGGA
AAAAGGGTCCCGGTGCGCAGAGGAGAGGAAGGAGGACAGTAAAGGGTGAA
TGCAGTATGCGGCTTGGAACAAGTCAACATTCGTAGATATACTTGTTTTA
ATTCTCAAAGTCATAGTGGCCGCCGCATTGATTGGCCATGCTCATCACAT
TAAAGGGGAAATCCAACCTGAACCTGTGTACGGGGTCCTTGACGACCCTA
CCTACGCCTACAGTGCAGAAGCCGCAACTGACATGCTGGTCCGTGTCAGC
TGGATTGCTGGGGGTTATGTAATGGTAGCAAGCGCCATCGGGTTGATAGG
GCGGTGCCTGCACGCTGCCCCTCTATATGGTGTCTACTACTGCGCCAATA
TTTTTGGCTTTGCTGTATGCCTGACCGCAGCAATAATCCCAACAGTGTGG
GGTACGACAAGAAAAGGACTATGTCTGGCCGCTGAAGCCTCCTGCCTGGC
TGTTGAGGATTTGAGTCTGTGTCCTTATCCCGTCAGTTCTTTTGCCACTC
AAACACGTCAGCGGGTACTGGCCGATCCGACGGAAGGGGTCTCCGGGGCT
GAAGGGGCTGTGACAATGGCAAGTTCCAGTCCGTGTTGCTACTTGCCTTC
GTTTTTATTCTTCTGTGAACATTTTTTTGGGGCCGTGTACACGCAAACTG
TAATCGCTGTTGTCCTCCTCGCCCTAGTCATGACGCAGAGCATGATCTCT
TGCTGCTATCTGTGCTGTGACTGTGACCGGCCGTGGACATCCAAGGGCCG
TCTGCCAGACATCCCAGAGCTTCCCACGTTCGTTCCTCCGGGCGGTCTGC
CCGGTCGATTTTCTTTGCACAAGGTAGGCGAACCCTTAAAGCCGGGGAGG
GACAGTCAGGCTGTCAAAGGAAGAAGGAGGACAAGGGAGGATGGGAGAAG
ACTTTCTTCGCTTGACAAAGCAGGTCCCGCGGTTCAAGAGGGGGGGGAGG
GGGAAGACAGCGCGGAGGGTGGTGCTGGGGAAAAAGGGTCCCGGTGCGCA
GAGGAGAGGAAGGAGGACAGTAAAGGGTGAATGCAGTATGCGGCTTGGAA
CAAGTCAACATTCGTAGATATACTTGTTTTAATTCTCAAAGTCATAGTGG
CCGCCGCATTGATTGGCCATGCTCATCACATTAAAGGGGAAATCCAACCT
GAACCTGTGTACGGGGTCCTTGACGACCCTACCTACGCCTACAGTGCAGA
AGCCGCAACTGACATGCTGGTCCGTGTCAGCTGGATTGCTGGGGGTTATG
TAATGGTAGCAAGCGCCATCGGGTTGATAGGGCGGTGCCTGCACGCTGCC
CCTCTATATGGTGTCTACTACTGCGCCAATATTTTTGGCTTTGCTGTATG
CCTGACCGCAGCAATAATCCCAACAGTGTGGGGTACGACAAGAAAAGGAC
TATGTCTGGCCGCTGAAGCCTCCTGCCTGGCTGTTGAGGATTTGAGTCTG
TGTCCTTATCCCGTCAGTTCTTTTGCCACTCAAACACGTCAGCGGGTACT
GGCCGATCCGACGGAAGGGGTCTCCGGGGCTGAAGGGGCTGTGACAATGG
CAAGTTCCAGTCCGTGTTGCTACTTGCCTTCGTTTTTATTCTTCTGTGAA
CATTTTTTTGGGGCCGTGTACACGCAAACTGTAATCGCTGTTGTCCTCCT
CGCCCTAGTCATGACGCAGAGCATGATCTCTTGCTGCTATCTGTGCTGTG
ACTGTGACCGGC
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Synonyms
Publications