EWM21774.1, cds8895 (CDS) Nannochloropsis gaditana

Overview
NameEWM21774.1
Unique Namecds8895
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:498017..498698 -
Alignment locationKK037250.1:497453..497751 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21774.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100188g6.2457.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:498017..498698 -
KK037250.1supercontigKK037250.1:497453..497751 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM21774.1 vs. NCBI_GenBank
Match: gi|585102109|gb|EWM21774.1| (hypothetical protein Naga_100188g6 [Nannochloropsis gaditana])

HSP 1 Score: 666.381 bits (1718), Expect = 0.000e+0
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0 
Query:    1 MQYAAWNKSTFVDILVLILKVIVAAALIGHAHHIKGEIQPEPVYGVLDDPTYAYSAEAATDMLVRVSWIAGGYVMVASAIGLIGRCLHAAPLYGVYYCANIFGFAVCLTAAIIPTVWGTTRKGLCLAAEASCLAVEDLSLCPYPVSSFATQTRQRVLADPTEGVSGAEGAVTMASSSPCCYLPSFLFFCEHFFGAVYTQTVIAVVLLALVMTQSMISCCYLCCDCDRPWTSKGRLPDIPELPTFVPPGGLPGRFSLHKVGEPLKPGRDSQAVKGRRRTREDGRRLSSLDKAGPAVQEGGEGEDSAEGGAGEKGSRCAEERKEDSKG 326
            MQYAAWNKSTFVDILVLILKVIVAAALIGHAHHIKGEIQPEPVYGVLDDPTYAYSAEAATDMLVRVSWIAGGYVMVASAIGLIGRCLHAAPLYGVYYCANIFGFAVCLTAAIIPTVWGTTRKGLCLAAEASCLAVEDLSLCPYPVSSFATQTRQRVLADPTEGVSGAEGAVTMASSSPCCYLPSFLFFCEHFFGAVYTQTVIAVVLLALVMTQSMISCCYLCCDCDRPWTSKGRLPDIPELPTFVPPGGLPGRFSLHKVGEPLKPGRDSQAVKGRRRTREDGRRLSSLDKAGPAVQEGGEGEDSAEGGAGEKGSRCAEERKEDSKG
Sbjct:    1 MQYAAWNKSTFVDILVLILKVIVAAALIGHAHHIKGEIQPEPVYGVLDDPTYAYSAEAATDMLVRVSWIAGGYVMVASAIGLIGRCLHAAPLYGVYYCANIFGFAVCLTAAIIPTVWGTTRKGLCLAAEASCLAVEDLSLCPYPVSSFATQTRQRVLADPTEGVSGAEGAVTMASSSPCCYLPSFLFFCEHFFGAVYTQTVIAVVLLALVMTQSMISCCYLCCDCDRPWTSKGRLPDIPELPTFVPPGGLPGRFSLHKVGEPLKPGRDSQAVKGRRRTREDGRRLSSLDKAGPAVQEGGEGEDSAEGGAGEKGSRCAEERKEDSKG 326
The following BLAST results are available for this feature:
BLAST of EWM21774.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102109|gb|EWM21774.1|0.000e+0100.00hypothetical protein Naga_100188g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8925rna8925Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications