EWM21826.1, cds8835 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|585102168|gb|EWM21826.1| (mitochondrial inner membrane protease atp23 [Nannochloropsis gaditana]) HSP 1 Score: 475.707 bits (1223), Expect = 5.581e-170 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 Query: 1 MTDGDDSLKRSQPNSHPAASTSSQSPPPHKGASRYAIRLFGPKDDHSICKLYTEKAKKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 MTDGDDSLKRSQPNSHPAASTSSQSPPPHKGASRYAIRLFGPKDDHSICKLYTEKAKKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP Sbjct: 1 MTDGDDSLKRSQPNSHPAASTSSQSPPPHKGASRYAIRLFGPKDDHSICKLYTEKAKKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|570981362|gb|ETP41794.1| (hypothetical protein F442_11208 [Phytophthora parasitica P10297]) HSP 1 Score: 155.606 bits (392), Expect = 4.608e-44 Identity = 77/182 (42.31%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 46 HSICKLYTEKA-KKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 H C+ EKA K RV+ LV A+ +GC+++ +C GGF + G +P +V+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS++ ++CK RA E IEKVF CY+D +PY +IP Sbjct: 22 HQECEDMREKALTKCSRVKFLVDAMEKMGCSLE-PGFFSSVECEGKINGGFHLDDDG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNDACKGRADECIEKVFDSCYRDWSPYREIP 196
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|695372696|ref|XP_009514877.1| (hypothetical protein PHYSODRAFT_539065 [Phytophthora sojae] >gi|348687788|gb|EGZ27602.1| hypothetical protein PHYSODRAFT_539065 [Phytophthora sojae]) HSP 1 Score: 154.451 bits (389), Expect = 1.263e-43 Identity = 75/182 (41.21%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 46 HSICKLYTEKA-KKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 H C+ EKA K RV+ LV A+ +GC+++ C GGF + +G +P +V+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS++ ++CK +A E I+KVF CY+D +PY +IP Sbjct: 22 HQKCEDMREKALTKCSRVKFLVNAMEKMGCSLE-PGFFSSVDCEGKINGGFHLDDEG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRNNFNVSKQHQLCTRRRAKLSIEQNDTCKGKADECIDKVFDSCYRDWSPYREIP 196
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|675196833|ref|XP_008907301.1| (hypothetical protein PPTG_13411 [Phytophthora parasitica INRA-310] >gi|566020992|gb|ETI43903.1| hypothetical protein F443_11301 [Phytophthora parasitica P1569] >gi|567958362|gb|ETK83951.1| hypothetical protein L915_11012 [Phytophthora parasitica] >gi|568016350|gb|ETL90527.1| hypothetical protein L917_10816 [Phytophthora parasitica] >gi|568046691|gb|ETM43796.1| hypothetical protein L914_10850 [Phytophthora parasitica] >gi|568092739|gb|ETN07544.1| hypothetical protein PPTG_13411 [Phytophthora parasitica INRA-310] >gi|570324610|gb|ETO72558.1| hypothetical protein F444_11367 [Phytophthora parasitica P1976] >gi|570948470|gb|ETP13727.1| hypothetical protein F441_11221 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 154.451 bits (389), Expect = 1.407e-43 Identity = 76/182 (41.76%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 46 HSICKLYTEKA-KKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 H C+ EKA K RV+ LV A+ +GC+++ +C GGF + G +P +V+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS++ ++CK RA E I+KVF CY+D +PY +IP Sbjct: 22 HQECEDMREKALTKCSRVKFLVDAMEKMGCSLE-PGFFSSVECEGKINGGFHLDDDG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNDACKGRADECIDKVFDSCYRDWSPYREIP 196
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|301093688|ref|XP_002997689.1| (mitochondrial inner membrane protease ATP23 [Phytophthora infestans T30-4] >gi|262109938|gb|EEY67990.1| mitochondrial inner membrane protease ATP23 [Phytophthora infestans T30-4]) HSP 1 Score: 154.066 bits (388), Expect = 1.551e-43 Identity = 76/182 (41.76%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 46 HSICKLYTEKA-KKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 H C+ EKA K RV+ LV A+ +GC+++ +C GGF + +G +P +V+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS++ +CK RA E I+KVF CY+D +PY +IP Sbjct: 22 HQKCEDMREKALTKCSRVKFLVDAMEKIGCSLE-PVFFSSVKCEGKINGGFHLDDEG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNGACKGRADECIDKVFDSCYRDWSPYREIP 196
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|813150903|ref|XP_012201098.1| (hypothetical protein SPRG_06329 [Saprolegnia parasitica CBS 223.65] >gi|641534325|gb|KDO28278.1| hypothetical protein SPRG_06329 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 152.91 bits (385), Expect = 4.364e-43 Identity = 72/178 (40.45%), Postives = 113/178 (63.48%), Query Frame = 0 Query: 50 KLYTEKAKKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQ-SCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 ++ + K +V+ LV + +GC ID T + + CN GGF N G P +V+C++++ ++ +T+AHEL+HA+D CRA +NW+ C +AC+EIRA+ LSG+CD+ E RG+F + QHQECVRRRA LS+Q C+ + ++ +EKVF+ CY+DT P+ ++P Sbjct: 27 EMRAQSLAKCSKVQFLVEIMDRMGCKIDPKTFFKSQHCNGNINGGFSLNEDG------SPSVVLCQNHIQDQEWMDRTVAHELIHAFDHCRANINWERDCDQHACSEIRAAALSGDCDWKFEVMRGHFSIPKQHQECVRRRAVLSLQYNPMCQGKEEKCVEKVFETCYKDTLPFPEMP 198
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|669139984|ref|XP_008605560.1| (hypothetical protein SDRG_01788 [Saprolegnia diclina VS20] >gi|530742474|gb|EQC40716.1| hypothetical protein SDRG_01788 [Saprolegnia diclina VS20]) HSP 1 Score: 152.525 bits (384), Expect = 6.732e-43 Identity = 72/178 (40.45%), Postives = 112/178 (62.92%), Query Frame = 0 Query: 50 KLYTEKAKKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQ-SCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 ++ + K +V+ LV + +GC ID T + + CN GGF N G P +V+C++++ ++ +T+AHEL+HA+D CRA +NW+ C +AC+EIRA+ LSG+CD+ E RG+F + QHQECVRRRA LS+Q C+ + + +EKVF+ CY+DT P+ ++P Sbjct: 27 EMRAQSLAKCSKVQFLVEIMDRMGCKIDPKTFFKSQHCNGNINGGFSLNEDG------SPSVVLCQNHIQDQEWMDRTVAHELIHAFDHCRANINWERDCDQHACSEIRAAALSGDCDWKFEVMRGHFSIPKQHQECVRRRAVLSLQYNPMCQGKEDKCVEKVFETCYKDTLPFPEMP 198
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|567987052|gb|ETL37366.1| (hypothetical protein L916_10911 [Phytophthora parasitica]) HSP 1 Score: 151.369 bits (381), Expect = 2.205e-42 Identity = 75/182 (41.21%), Postives = 115/182 (63.19%), Query Frame = 0 Query: 46 HSICKLYTEKA-KKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 H C+ EKA K RV+ LV A+ +GC+++ +C GGF + G +P +V+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRA+LS++ ++CK RA E I+KVF CY+D +PY +IP Sbjct: 22 HQECEDMREKALTKCSRVKFLVDAMEKMGCSLE-PGFFSSVECEGKINGGFHLDDDG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTGRRAKLSIEQNDACKGRADECIDKVFDSCYRDWSPYREIP 196
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|953492458|emb|CEG45046.1| (mitochondrial inner membrane protease atp23 [Plasmopara halstedii]) HSP 1 Score: 150.599 bits (379), Expect = 3.513e-42 Identity = 73/182 (40.11%), Postives = 113/182 (62.09%), Query Frame = 0 Query: 46 HSICKLYTEKAKKT-PRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 H C++ E ++K RV L+ + +GCTI C+ GGF + +G +P +V+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ CVRRRA LS++ E+C A E I+KVF CY+D +P+ +IP Sbjct: 22 HQKCEMMRESSQKNCSRVMFLMDTMEKMGCTIR-KGFFSSISCDKNINGGFHVDDEG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCVRRRAALSIEQNEACTGTANECIDKVFDSCYRDWSPFREIP 196
BLAST of EWM21826.1 vs. NCBI_GenBank
Match: gi|1173951969|gb|OQR99734.1| (mitochondrial inner membrane protease ATP23 [Achlya hypogyna]) HSP 1 Score: 149.828 bits (377), Expect = 7.212e-42 Identity = 70/171 (40.94%), Postives = 110/171 (64.33%), Query Frame = 0 Query: 57 KKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQ-SCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226 +K +V+ LV + +GC I+ T + + CN GGF N G P +V+C++++ ++ +T+AHEL+HA+D CRAK++W+ C +AC+EIRA+ LSG+CD+ E RG+F + QHQECVRRRA LS+Q C+ + + ++KVF CY+DT P+ ++P Sbjct: 34 QKCSKVQFLVEIMDRMGCKINPQTFFKAQHCNGNINGGFSLNEDG------SPSVVLCQNHIQDQEWMDRTMAHELIHAFDHCRAKIDWERDCDQHACSEIRAAALSGDCDWKYEVLRGHFSIPKQHQECVRRRAILSLQFNPMCEGKEAKCVDKVFDTCYKDTLPFPEMP 198 The following BLAST results are available for this feature:
BLAST of EWM21826.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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