EWM21867.1, cds8807 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21867.1 vs. NCBI_GenBank
Match: gi|585102210|gb|EWM21867.1| (hypothetical protein Naga_100169g7 [Nannochloropsis gaditana]) HSP 1 Score: 788.875 bits (2036), Expect = 0.000e+0 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0 Query: 1 MARRQRYTLSQKMGCTPAAPLERIMASLVILCALVSTGFSFSITLSKRSTPARKRYDSSTCLPLQRPCAVKTIARLSPVHEELGLRPHSTGGVRADIFLRNTTAVSSSVSTLERPQPEPPLHATSTIPENVEEKNMLARMRRMEGTMQSLEREVKRLESAIAVKGRGRSRAKMIVINYDVGPDAQIDSVDIAVGAAGAFGLLGLLIGRSLASNLWFVGFLTGALGAGFLAREEEGGAVSDVIRAVGWQVAVKTRQLVFMYKTGRLSYVYAKKWEAFDRKYAVTKKMEALQTLSLKKWREAQEAERKYEVRYRLTAFLKAGYNGVVDTTAALFNAKDRKELVRKLPKPFRLLFMSKAQRRAEERRRVTVRRFVGLREGRPIVEVQDDA 387 MARRQRYTLSQKMGCTPAAPLERIMASLVILCALVSTGFSFSITLSKRSTPARKRYDSSTCLPLQRPCAVKTIARLSPVHEELGLRPHSTGGVRADIFLRNTTAVSSSVSTLERPQPEPPLHATSTIPENVEEKNMLARMRRMEGTMQSLEREVKRLESAIAVKGRGRSRAKMIVINYDVGPDAQIDSVDIAVGAAGAFGLLGLLIGRSLASNLWFVGFLTGALGAGFLAREEEGGAVSDVIRAVGWQVAVKTRQLVFMYKTGRLSYVYAKKWEAFDRKYAVTKKMEALQTLSLKKWREAQEAERKYEVRYRLTAFLKAGYNGVVDTTAALFNAKDRKELVRKLPKPFRLLFMSKAQRRAEERRRVTVRRFVGLREGRPIVEVQDDA Sbjct: 1 MARRQRYTLSQKMGCTPAAPLERIMASLVILCALVSTGFSFSITLSKRSTPARKRYDSSTCLPLQRPCAVKTIARLSPVHEELGLRPHSTGGVRADIFLRNTTAVSSSVSTLERPQPEPPLHATSTIPENVEEKNMLARMRRMEGTMQSLEREVKRLESAIAVKGRGRSRAKMIVINYDVGPDAQIDSVDIAVGAAGAFGLLGLLIGRSLASNLWFVGFLTGALGAGFLAREEEGGAVSDVIRAVGWQVAVKTRQLVFMYKTGRLSYVYAKKWEAFDRKYAVTKKMEALQTLSLKKWREAQEAERKYEVRYRLTAFLKAGYNGVVDTTAALFNAKDRKELVRKLPKPFRLLFMSKAQRRAEERRRVTVRRFVGLREGRPIVEVQDDA 387
BLAST of EWM21867.1 vs. NCBI_GenBank
Match: gi|298706958|emb|CBJ29777.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 78.5666 bits (192), Expect = 2.511e-12 Identity = 60/184 (32.61%), Postives = 97/184 (52.72%), Query Frame = 0 Query: 147 MQSLEREVKRL--ESAIAVKGRGRSRAKMIVINYDVGPDAQIDSVDIAVGAAGAFGLLGLLIGRSLASNLWFVGFLTGALGAGFLAREEEGGAVSDVIRAVGWQVAVKTR-------QLVFMYKTGRLSYVYAKKWEAFDRKYAVTKK-MEALQTLSLKKWREAQEAERKYEVRYRLTAFLKAG 320 + ERE+KR+ E ++A R R + +I D+ +GAA A + G+++G S+ NLW VG +TGAL L+R G V + G QVA+ + Q VF+YKTG+LSY Y + +E +D+ + ++ K E + +S +EA E +R+Y++R + L+AG Sbjct: 128 LSETERELKRIQKEGSLAKTNRSEVRDRKFII----------DTRAKMLGAAFAGSVAGMIVGWSVLPNLWLVGGVTGALAFAALSRSST-GTVGTICSTCGIQVALMYKDVRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSAKYTETVAKVS----KEALELDRQYKIRQKT---LRAG 293
BLAST of EWM21867.1 vs. NCBI_GenBank
Match: gi|1210521474|dbj|GAX19464.1| (hypothetical protein FisN_19Hh038 [Fistulifera solaris]) HSP 1 Score: 65.0846 bits (157), Expect = 8.383e-8 Identity = 39/136 (28.68%), Postives = 70/136 (51.47%), Query Frame = 0 Query: 184 AQIDSVDIAVGAAGAFGLLGLLIGRSLASNLWFVGFLTGALGAGFLAREEEGGAVSDVIRAVGWQVAVKT-------RQLVFMYKTGRLSYVYAKKWEAFDRKYAVTKKMEALQT------LSLKKWREAQEAERK 306 +++D + G + A LLG+++G S+ NLW G + GA+ + +E S ++ +G ++A + L FMYKTG+LSY Y +++ A D+K+A+ K++A + KW + E R+ Sbjct: 301 SKLDLNALKKGNSVAGLLLGMILGISILPNLWLFGSIVGAVYGYNITPLDELNVASRIVTQLGRKIARASLSVYDSANTLFFMYKTGQLSYEYYQRYAALDQKFAIQDKIDAFNARFAEGKVKFDKWEKENEVGRR 436
BLAST of EWM21867.1 vs. NCBI_GenBank
Match: gi|1072237580|gb|OEU22307.1| (hypothetical protein FRACYDRAFT_259021 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 63.929 bits (154), Expect = 2.258e-7 Identity = 42/152 (27.63%), Postives = 71/152 (46.71%), Query Frame = 0 Query: 190 DIAVGAAGAFGLLGLLIGRSLASNLWFVGFLTGALGAGFLAREE-------------EGGAVSDVIRAVGWQVAVKTRQLV-------FMYKTGRLSYVYAKKWEAFDRKYAVTKKMEALQTLSLKKWREAQEAERKYEVRYRLTAFLKAGY 321 DI G A G ++G ++ NLW VGF +GA+ + +E E ++ + A G Q+A Q F+YKTG+LSY Y K +E D K+A+ K++A + + ++ + E+ EV ++ A L+ + Sbjct: 231 DIQRGTTIAGSFSGFILGATILPNLWLVGFFSGAIYGYEITKENPLSITQQGQIHTIEPNIIARFLIAFGKQLAKIYLQFADYGKAMWFLYKTGQLSYEYYKTYETLDNKFAIQNKVDAWNRVFGEGKQKFDDWEKNNEVGRKMLAGLRTAW 382
BLAST of EWM21867.1 vs. NCBI_GenBank
Match: gi|1210524752|dbj|GAX16460.1| (hypothetical protein FisN_19Lh038 [Fistulifera solaris]) HSP 1 Score: 62.003 bits (149), Expect = 7.973e-7 Identity = 37/136 (27.21%), Postives = 68/136 (50.00%), Query Frame = 0 Query: 184 AQIDSVDIAVGAAGAFGLLGLLIGRSLASNLWFVGFLTGALGAGFLAREEEGGAVSDVIRAVGWQVAVKT-------RQLVFMYKTGRLSYVYAKKWEAFDRKYAVTKKMEALQT------LSLKKWREAQEAERK 306 +++D + G A LLG+++ S+ NLW G + GA+ + ++ S V+ +G ++A + L FMYKTG+LSY Y +++ A D+++A+ K++A + KW + E R+ Sbjct: 221 SKLDFSSLKKGNLVAGLLLGMILAMSILPNLWLFGSIVGAIYGYNITPLDQDNIASRVVSHLGRRIARASLSVYDSANTLFFMYKTGQLSYKYYQRYAALDQRFAIQDKIDAFNARFAEGKVKFDKWEKENEVGRR 356 The following BLAST results are available for this feature:
BLAST of EWM21867.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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