EWM21869.1, cds8801 (CDS) Nannochloropsis gaditana

Overview
NameEWM21869.1
Unique Namecds8801
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:267627..268082 +

Link to JBrowse

Properties
Property NameValue
Start range267627
Start range.
Protein idEWM21869.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100169g1.560.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:267627..268082 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21869.1 vs. NCBI_GenBank
Match: gi|585102212|gb|EWM21869.1| (hypothetical protein Naga_100169g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 253.447 bits (646), Expect = 1.624e-84
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:    1 TPAAPAAPAEAPTAPAAPVAADDAPAAPAASVAADDAPATPAAPVAADDAPAAAPVAAIPAAETPEADGAEPGPETPAVESPATAAPAAPTAPARPALPQEPPATLPPPAPQPLDPSAGGLMQPEPSAVGPPSEGTRQRKKKTLKQIFGLS 151
            TPAAPAAPAEAPTAPAAPVAADDAPAAPAASVAADDAPATPAAPVAADDAPAAAPVAAIPAAETPEADGAEPGPETPAVESPATAAPAAPTAPARPALPQEPPATLPPPAPQPLDPSAGGLMQPEPSAVGPPSEGTRQRKKKTLKQIFGLS
Sbjct:    1 TPAAPAAPAEAPTAPAAPVAADDAPAAPAASVAADDAPATPAAPVAADDAPAAAPVAAIPAAETPEADGAEPGPETPAVESPATAAPAAPTAPARPALPQEPPATLPPPAPQPLDPSAGGLMQPEPSAVGPPSEGTRQRKKKTLKQIFGLS 151
The following BLAST results are available for this feature:
BLAST of EWM21869.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102212|gb|EWM21869.1|1.624e-84100.00hypothetical protein Naga_100169g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8831rna8831Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications