rna8831, rna8831 (mRNA) Nannochloropsis gaditana

Overview
Namerna8831
Unique Namerna8831
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1066
Alignment locationKK037250.1:267627..268552 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100169g1.560.mrna
Orig protein idgnl|cribi|Naga_100169g1.560
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:267627..268552 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100169g1gene8561Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8831rna8831-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21869.1cds8801Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8831 ID=rna8831|Name=rna8831|organism=Nannochloropsis gaditana|type=mRNA|length=1066bp
AGCGCACACGAACACTGGTACATGCATGCACTTTTTGCACAAATCTGCTT
GACAAAATTTGTGGGTGGTGCGGTTCTTTGCTTGTTTAATGAGGACCAGC
TTATTGTTTTTCGTCCCCAATTTCCTTATAACAGTTCTCTGGAGAACAGT
CGCCTTTTCCTCAGAGCGTCCCTAATTTTCGTTTTAACAATCATACCAGG
TGGCACAAATGATATGAATCTCACCACCTCATGAAATAAAACTTAGGCTT
TCATATGTGAGCCACATTTTTGTACAACCTTACTCATTATCGGTTTTGAC
ATTTTTTCGTGCTTTCTCCACGTTCGACTCATGCAGCAGCTTTCCCTTTT
GCAACACAGACATCTGCATCATGCGTCTATTTGCTCGGCGGCATCTTCTT
TTTGCCGCTCTAGCAGCCGTTGGAATCTTTCATGCAAACGCACAGCAAAC
TTTTTTGCGGTCAATGTCGGGTGCAGATAGCGTGGCCGCTGTAAAGCAAT
CGTCAGCCCGGCCTGCCGAGGCTTTGACCCTCCTGGAGATGGGCACAGTC
ACCGCGGCCGTGGATCCTGCAGGAGATGTGGCACCTGAGGCTATTACTCC
TTTTCAGGATATGGAGGAAGCCAAAGAGCCGAAGAAACCTGCCGCAGCGG
ACGCTCCCGTGGCAGCCCCCGCCACCGGCGCCGCTCCGAAAGCCCCGGCA
TTGGGCGACCCTCCTCTTGATGCGCCCGCGGCCCCTGCTGTTGCTGCCGT
TCCACCGGTAGAGGCGCCTGCAGCCCCGGCAGAAGCGCCTACTGCACCTG
CTGCACCTGTGGCAGCTGACGACGCACCTGCTGCACCTGCTGCACCTGTG
GCAGCTGACGACGCACCTGCTGCACCTGCTGCACCTGAGGCAGCTGATGA
CGCACCTGCTGCACCTGCTGCACCTGTGGCAGCTGACGACGCACCTGCTA
CACCTGCTGCACCTGCAGCCCCGGCAGAAGCGCCTACTGCACCTGCTGCA
CCTGTGGCAGCTGACGACGCACCTGCTGCACCTGCTGCACCTGTGGCAGC
TGACGACGCACCTGCT
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protein sequence of rna8831

>rna8831-protein ID=rna8831-protein|Name=rna8831|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
TPAAPAAPAEAPTAPAAPVAADDAPAAPAASVAADDAPATPAAPVAADDA
PAAAPVAAIPAAETPEADGAEPGPETPAVESPATAAPAAPTAPARPALPQ
EPPATLPPPAPQPLDPSAGGLMQPEPSAVGPPSEGTRQRKKKTLKQIFGL
S
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mRNA from alignment at KK037250.1:267627..268552+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8831 ID=rna8831|Name=rna8831|organism=Nannochloropsis gaditana|type=mRNA|length=926bp|location=Sequence derived from alignment at KK037250.1:267627..268552+ (Nannochloropsis gaditana)
AcacctgctgcacctgcAGCCCCGGCAGAAGCGCCTACTgcacctgctgc
acctgtgGCAGCTGACGAcgcacctgctgcacctgcTGCATCTGTGGCAG
CTGACGACGCACCTGCTAcacctgctgcacctgtgGCAGCTGACGACGCA
CCTGCTGCTGCACCTGTAGCAGCCATCCCTGCAGCAGAGACCCCTGAGGC
GGATGGTGCCGAGCCAGGGCCTGAAACGCCCGCCGTCGAATCTCCTGCGA
CAGCAGCGCCTGCTGCCCCCACTGCCCCTGCTCGACCGGCTCTGCCTCAG
GAGCCTCCCGCgaccttgcccccgcccgccccccagCCTCTGGACCCGAG
CGCGGGGGGTCTGATGCAGCCCGAGCCTTCCGCAGTGGGCCCTCCGTCGG
AAGGCACGAGGCAgcgcaagaaaaagacgcTCAAGCAAATTTTCGGCTTG
TCCTGAGCGTACGTGTGGGGATTTACAAGCATGAGGAGGGACGCAGGGGG
CGTGTAGCATCCCGGTCCCGGAGAGACGTGCATTGCGTGGGAGAATTATC
GGCGTCGCAATTGGAAGCAGGCAGTCCGCATGTGCCTTCATGTATGTCTA
GTGACGATGTCTTTGATAGAGCTTACACGTGTACAACGAAAGCGTGAATT
CTGAAGGCAAGACATGCTTGCTCACGGCGAGTCGTTGCTTTTCGTTTGTT
TACAATCATGAGCGTTCTTTGTACAGCCTACCTTTGTCGCCGATCTATGG
TCCATCTCGCCACGCCGAGCAGGATGCCCTTCTGTGCTCGTTTCACCACG
GGTCCTCACCAATTACTCCGTGgcatttcctccgtcccaccgCCCATCCC
ACCCGCCCGTTCCCCTCTGTCCCCATTCTCTCCTTCTGAGCCTTCGGATC
CCCCCAGCCAGCAATCCGACGACACA
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Coding sequence (CDS) from alignment at KK037250.1:267627..268552+

>rna8831 ID=rna8831|Name=rna8831|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at KK037250.1:267627..268552+ (Nannochloropsis gaditana)
AcacctgctgcacctgcAGCCCCGGCAGAAGCGCCTACTgcacctgctgc
acctgtgGCAGCTGACGAcgcacctgctgcacctgcTGCATCTGTGGCAG
CTGACGACGCACCTGCTAcacctgctgcacctgtgGCAGCTGACGACGCA
CCTGCTGCTGCACCTGTAGCAGCCATCCCTGCAGCAGAGACCCCTGAGGC
GGATGGTGCCGAGCCAGGGCCTGAAACGCCCGCCGTCGAATCTCCTGCGA
CAGCAGCGCCTGCTGCCCCCACTGCCCCTGCTCGACCGGCTCTGCCTCAG
GAGCCTCCCGCgaccttgcccccgcccgccccccagCCTCTGGACCCGAG
CGCGGGGGGTCTGATGCAGCCCGAGCCTTCCGCAGTGGGCCCTCCGTCGG
AAGGCACGAGGCAgcgcaagaaaaagacgcTCAAGCAAATTTTCGGCTTG
TCCTGA
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Synonyms
Publications