EWM21891.1, cds8782 (CDS) Nannochloropsis gaditana

Overview
NameEWM21891.1
Unique Namecds8782
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:227641..227772 +
Alignment locationKK037250.1:227838..228301 +
Alignment locationKK037250.1:228372..228459 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21891.1
Producthcp beta-lactamase-like protein
Orig transcript idgnl|cribi|Naga_100231g4.10122.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:227641..227772 +
KK037250.1supercontigKK037250.1:227838..228301 +
KK037250.1supercontigKK037250.1:228372..228459 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR006597Sel1-like
Homology
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|585102236|gb|EWM21891.1| (hcp beta-lactamase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 469.544 bits (1207), Expect = 1.378e-167
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query:    1 MIEGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKKGH 227
            MIEGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKKGH
Sbjct:    1 MIEGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKKGH 227          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|298708322|emb|CBJ48385.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 224.942 bits (572), Expect = 5.501e-71
Identity = 107/224 (47.77%), Postives = 150/224 (66.96%), Query Frame = 0
Query:    2 IEGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKK 225
            ++G Q +D EYE+RM  FE DC+ GKG+A ACH VGE+L+VVK D++KA +++  NC   +H PSCFNLGR  L G+G+PQSD ++ K FD++C   H  AC H+G + LYG +G     +D+KKA  +L+ +C  G+ DSC  LA  LLRH  +     RD  +A+GLLE+GC+  HGPSCFNL VM KKGD G+P + +++ +Y++ TE L  Q   +   K
Sbjct:    1 MDGFQEVDAEYEDRMRTFESDCNDGKGNAVACHQVGEYLSVVKNDFDKAGRIFEANCNTRNHAPSCFNLGRFLLAGKGLPQSDAQAEKVFDSACGKDHQPACLHLGFMHLYGGEG---FKRDIKKAIEVLDTSCSGGLADSCNMLAKQLLRHDGKGPV-PRDPPRARGLLEKGCSHNHGPSCFNLTVMLKKGDEGVPSDYKKYREYREKTESLAAQLQGIDGNK 220          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|301112292|ref|XP_002905225.1| (hcp beta-lactamase-like protein [Phytophthora infestans T30-4] >gi|262095555|gb|EEY53607.1| hcp beta-lactamase-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 186.037 bits (471), Expect = 1.355e-55
Identity = 93/218 (42.66%), Postives = 131/218 (60.09%), Query Frame = 0
Query:    5 LQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALT 222
            ++ ++ + EER   F  +C+ G GDA ACHS GE+LAVV  +YN AAK+Y  NC+K  +P SCFNLGRL L G+G  Q D ++ K F  SC  GH  ACHH+G +    +  G    KD+ KA       C     +SC  +A+  LR  P +    RD  +AK  LE+ C   + P+C NLAVM+KKGD  IP++E ++E+Y+  TE L++Q G ++
Sbjct:   12 VRRVNQQLEERHYEFRSNCNDGDGDASACHSWGEWLAVVDKNYNDAAKMYELNCSKNGYPASCFNLGRLKLAGKGAEQDDPKAFKLFQKSCSGGHAAACHHVGFM----RTQGIGCEKDLAKAVAAFKDGCDRDDANSCNRVATMYLRPGP-NSPITRDIQQAKTYLEKACDANYAPACHNLAVMYKKGDESIPKDESKYEEYRAKTEQLIKQAGGMS 224          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|813148888|ref|XP_012200091.1| (hypothetical protein SPRG_05457 [Saprolegnia parasitica CBS 223.65] >gi|641535359|gb|KDO29277.1| hypothetical protein SPRG_05457 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 184.496 bits (467), Expect = 5.135e-55
Identity = 96/218 (44.04%), Postives = 135/218 (61.93%), Query Frame = 0
Query:    8 IDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKK 225
            ++ E E+R   F  +CD G GDA ACHS GE+LAVV  +Y+ A KVY  NC + ++  SCFN GRL L G+GV  +D  +++ F+ +C  GH   CHH+GL+ L     G  V+KDV+K    ++KAC  G   SCY L S  L    +    +RD  KAK  LEQ C     P+C NLAVM+KKGDTG+P++++ +E+Y + T+ LV+Q+G +   K
Sbjct:   12 LNEELEKRHYEFVSNCDDGNGDASACHSYGEWLAVVDKNYDHAGKVYKKNCDEKAYGASCFNYGRLLLAGKGVEANDAAAMQHFEKACDGGHTHGCHHLGLMYL----NGMGVTKDVEKGMAAIDKACANGEGSSCYRLGSMFLTSQSK-FGLKRDVPKAKAYLEQACDANFAPACHNLAVMYKKGDTGVPQSDKLYEQYSEKTKMLVQQSGGMAGYK 224          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|669154730|ref|XP_008612927.1| (hypothetical protein SDRG_08808 [Saprolegnia diclina VS20] >gi|530735462|gb|EQC33704.1| hypothetical protein SDRG_08808 [Saprolegnia diclina VS20])

HSP 1 Score: 179.489 bits (454), Expect = 4.660e-53
Identity = 93/218 (42.66%), Postives = 134/218 (61.47%), Query Frame = 0
Query:    8 IDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKK 225
            ++ E E+R   F  +CD G GDA ACHS GE+LAVV  +Y+ A KVY  NC + ++  SCFN GRL L G+GV  +D  +++ F  +C  GH   CHH+GL+ L     G  V++D++K    ++KAC +G   SCY L S  L    +    +RD  KAK  LEQ C     P+C NLAVM+KKGD G+P++++ +E+Y + T+ LV+Q+G +   K
Sbjct:   12 LNEELEKRHYEFVSNCDDGNGDASACHSYGEWLAVVDKNYDHAGKVYKKNCDEKAYGASCFNYGRLLLAGKGVEANDAAAMQHFKKACDGGHTHGCHHLGLMYL----NGMGVTQDLEKGMAAIDKACAKGEGSSCYRLGSMFLTSQSK-FGLKRDVPKAKAYLEQACDANFAPACHNLAVMYKKGDAGVPQSDKLYEQYSEKTKILVQQSGGMAGYK 224          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|566013131|gb|ETI36042.1| (hypothetical protein F443_17758 [Phytophthora parasitica P1569] >gi|567950560|gb|ETK76271.1| hypothetical protein L915_17287 [Phytophthora parasitica] >gi|567979230|gb|ETL29712.1| hypothetical protein L916_17180 [Phytophthora parasitica] >gi|568008723|gb|ETL82940.1| hypothetical protein L917_17015 [Phytophthora parasitica] >gi|568038644|gb|ETM36167.1| hypothetical protein L914_17084 [Phytophthora parasitica] >gi|570316783|gb|ETO64731.1| hypothetical protein F444_17796 [Phytophthora parasitica P1976] >gi|570940561|gb|ETP05818.1| hypothetical protein F441_17636 [Phytophthora parasitica CJ01A1] >gi|570970855|gb|ETP33974.1| hypothetical protein F442_17613 [Phytophthora parasitica P10297] >gi|970634835|gb|KUF79913.1| Hcp beta-lactamase protein [Phytophthora nicotianae])

HSP 1 Score: 179.104 bits (453), Expect = 6.478e-53
Identity = 90/218 (41.28%), Postives = 129/218 (59.17%), Query Frame = 0
Query:    5 LQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALT 222
            ++ ++ + EER   F  +C+ G GDA ACHS GE+LAVV  +Y  AA +Y  NC+K  +P SCFNLGRL L G+G  Q D  + K F+ SC  GH  ACHH+G +    +  G    KD  KA     + C     +SC  +A+  LR  P +   +RD  +AK  LE+ C     P+C NLAVM+KKGD  IP+++ ++E+Y+  TE L++Q G ++
Sbjct:   12 VKRVNQQLEERHYEFRSNCNDGNGDASACHSWGEWLAVVDKNYKDAANMYELNCSKNGYPASCFNLGRLKLAGKGAEQDDLEAFKLFEKSCSGGHAAACHHVGFM----RTQGIGCEKDFPKALAAFKEGCERDDANSCNRVATMYLRPGP-NSPIKRDIQQAKTYLEKACDANFAPACHNLAVMYKKGDESIPKDQAKYEEYRAKTEQLIKQAGGMS 224          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|695396448|ref|XP_009521463.1| (hypothetical protein PHYSODRAFT_486146 [Phytophthora sojae] >gi|348686360|gb|EGZ26175.1| hypothetical protein PHYSODRAFT_486146 [Phytophthora sojae])

HSP 1 Score: 179.104 bits (453), Expect = 8.498e-53
Identity = 95/219 (43.38%), Postives = 133/219 (60.73%), Query Frame = 0
Query:    5 LQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSH-ERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALT 222
            ++ ++ + EER   F  +C+ G GDA ACHS GE+LAVV  +Y+ AAK+Y  NC+K S+P SCFNLGRL L G+G  Q D  + K F+ SC  GH  ACHH+G + +     G    KDV K      +AC     +SC  +A+  L   P   S  +RD L+AK  LE+ C     P+C NLAVM+KKGD  IP++E ++++Y+  TE L+EQ G ++
Sbjct:   12 VKRVNQQLEERHYEFRSNCNDGDGDASACHSWGEWLAVVDKNYDDAAKMYELNCSKNSYPASCFNLGRLKLAGKGSAQDDPEAFKLFEKSCGDGHAAACHHVGFMRMQ----GIGCDKDVAKGLAAFKEACERDDANSCNRVATMYLS--PGLGSPIKRDILQAKTYLERACDANFAPACHNLAVMYKKGDESIPKDEAKYKEYRAKTEKLIEQAGGMS 224          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|1214680683|gb|OWY99791.1| (Hcp beta-lactamase [Phytophthora megakarya])

HSP 1 Score: 176.792 bits (447), Expect = 7.055e-52
Identity = 92/219 (42.01%), Postives = 131/219 (59.82%), Query Frame = 0
Query:    5 LQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSH-ERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALT 222
            ++ ++ + EER   F  +C+ G GDA ACHS GE+LAVV  +Y  AAK+Y  NC+K S+  SCFNLGRL L G+G  Q+D  + K F+ SC  GH  ACHH+G +    +  G    KDV K+     + C     +SC  +A+  L   P+  S  +RD  +AK  LE+ C     P+C NLAVM+KKGD  IP++E ++E+Y+  TE L+ Q G ++
Sbjct:   12 VKRVNQQLEERHYEFRSNCNDGDGDASACHSWGEWLAVVDKNYTDAAKMYELNCSKNSYAASCFNLGRLKLAGKGSEQNDPEAFKLFEKSCTDGHAAACHHVGFM----RSQGIGCEKDVAKSLAAFKEGCDRDDANSCNRVATMYLS--PKVNSPIKRDIQQAKTYLERACDANFAPACHNLAVMYKKGDESIPKDEAKYEEYRAKTETLIAQAGGMS 224          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|675174741|ref|XP_008896255.1| (hypothetical protein PPTG_04162 [Phytophthora parasitica INRA-310] >gi|568103958|gb|ETN18615.1| hypothetical protein PPTG_04162 [Phytophthora parasitica INRA-310])

HSP 1 Score: 176.792 bits (447), Expect = 7.132e-52
Identity = 89/218 (40.83%), Postives = 128/218 (58.72%), Query Frame = 0
Query:    5 LQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALT 222
            ++ ++ + EER   F  +C+ G GDA ACHS GE+LAVV  +Y  AA +Y  NC+K  +P SCFNLGRL L G+G    D  + K F+ SC  GH  ACHH+G +    +  G    KD  KA     + C     +SC  +A+  LR  P +   +RD  +AK  LE+ C     P+C NLAVM+KKGD  IP+++ ++E+Y+  TE L++Q G ++
Sbjct:   12 VKRVNQQLEERHYEFRSNCNDGNGDASACHSWGEWLAVVDKNYKDAANMYELNCSKNGYPASCFNLGRLKLAGKGAEHDDLEAFKLFEKSCSGGHAAACHHVGFM----RTQGIGCEKDFPKALAAFKEGCERDDANSCNRVATMYLRPGP-NSPIKRDIQQAKTYLEKACDANFAPACHNLAVMYKKGDESIPKDQAKYEEYRAKTEQLIKQAGGMS 224          
BLAST of EWM21891.1 vs. NCBI_GenBank
Match: gi|325186889|emb|CCA21434.1| (hcp betalactamaselike protein putative [Albugo laibachii Nc14])

HSP 1 Score: 175.252 bits (443), Expect = 3.000e-51
Identity = 91/224 (40.62%), Postives = 130/224 (58.04%), Query Frame = 0
Query:    3 EGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLL-----RHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGAL 221
            E +  ++   E+R+  F+ +CD GKGD  ACHS GE+L VV+ DYN AA+VY  NC +  +  SCFNLGRL L G+G+ ++D ++L+ F++SC   H  AC H  L+ L     G   SKDV +    L  AC +    SC  + S  L      +  + K  +RD ++AK    + C     P+C+NLAVM K GDTG+ +NE+ +E+YKK TE LV Q   +
Sbjct:   14 EEVDGVNQAIEDRLHEFKANCDNGKGDPMACHSWGEWLTVVEKDYNSAAEVYRKNCEQNCYAASCFNLGRLTLAGKGIEENDEKALELFESSCAKKHAQACQHAALMYL----EGIGTSKDVLRGLAGLKTACKQDDAGSCSRVGSFYLDPPKIENKEQSKKLQRDPIRAKKYYGRACDANFAPACYNLAVMFKNGDTGVDKNEELYEEYKKKTEQLVNQAKGM 233          
The following BLAST results are available for this feature:
BLAST of EWM21891.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102236|gb|EWM21891.1|1.378e-167100.00hcp beta-lactamase-like protein [Nannochloropsis g... [more]
gi|298708322|emb|CBJ48385.1|5.501e-7147.77conserved unknown protein [Ectocarpus siliculosus][more]
gi|301112292|ref|XP_002905225.1|1.355e-5542.66hcp beta-lactamase-like protein [Phytophthora infe... [more]
gi|813148888|ref|XP_012200091.1|5.135e-5544.04hypothetical protein SPRG_05457 [Saprolegnia paras... [more]
gi|669154730|ref|XP_008612927.1|4.660e-5342.66hypothetical protein SDRG_08808 [Saprolegnia dicli... [more]
gi|566013131|gb|ETI36042.1|6.478e-5341.28hypothetical protein F443_17758 [Phytophthora para... [more]
gi|695396448|ref|XP_009521463.1|8.498e-5343.38hypothetical protein PHYSODRAFT_486146 [Phytophtho... [more]
gi|1214680683|gb|OWY99791.1|7.055e-5242.01Hcp beta-lactamase [Phytophthora megakarya][more]
gi|675174741|ref|XP_008896255.1|7.132e-5240.83hypothetical protein PPTG_04162 [Phytophthora para... [more]
gi|325186889|emb|CCA21434.1|3.000e-5140.63hcp betalactamaselike protein putative [Albugo lai... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8812rna8812Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications