EWM21902.1, cds8772 (CDS) Nannochloropsis gaditana

Overview
NameEWM21902.1
Unique Namecds8772
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:205077..205460 -
Alignment locationKK037250.1:204742..204855 -
Alignment locationKK037250.1:204100..204633 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21902.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100070g28.4216.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:205077..205460 -
KK037250.1supercontigKK037250.1:204742..204855 -
KK037250.1supercontigKK037250.1:204100..204633 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM21902.1 vs. NCBI_GenBank
Match: gi|585102248|gb|EWM21902.1| (hypothetical protein Naga_100070g28 [Nannochloropsis gaditana])

HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query:    1 MTPGRSQTGLLLLLFATSSILLAEGFHQAPGARTSVSSLRPPRQIHRLPQSRCYALDPAFVTDAALNGGVGGGPQQVAEAMLALLRGPSGVGIFGLTALLIRLYTYFTVQSYIAKLCTLFADNGTTVELRYGNSLRNLFYYEPGPGKMDQLLIPSGDPKNLQTIAEVCARLKVAAKATYSVTALPETFEALKLPAESVDTVVSTYMLNKSKQPLVTFAKAMDMLKDDGVFVFVEPVCGDNPLLGGIRKYLGAIHRATGAFGDPGLDLKNLVNAWAEQVGKAEGIELDLDVEEQSYFLDPHIVGVMYKRKVDRGPDYEPSKSEKRKLARRRGMTTTSKGFGSSS 343
            MTPGRSQTGLLLLLFATSSILLAEGFHQAPGARTSVSSLRPPRQIHRLPQSRCYALDPAFVTDAALNGGVGGGPQQVAEAMLALLRGPSGVGIFGLTALLIRLYTYFTVQSYIAKLCTLFADNGTTVELRYGNSLRNLFYYEPGPGKMDQLLIPSGDPKNLQTIAEVCARLKVAAKATYSVTALPETFEALKLPAESVDTVVSTYMLNKSKQPLVTFAKAMDMLKDDGVFVFVEPVCGDNPLLGGIRKYLGAIHRATGAFGDPGLDLKNLVNAWAEQVGKAEGIELDLDVEEQSYFLDPHIVGVMYKRKVDRGPDYEPSKSEKRKLARRRGMTTTSKGFGSSS
Sbjct:    1 MTPGRSQTGLLLLLFATSSILLAEGFHQAPGARTSVSSLRPPRQIHRLPQSRCYALDPAFVTDAALNGGVGGGPQQVAEAMLALLRGPSGVGIFGLTALLIRLYTYFTVQSYIAKLCTLFADNGTTVELRYGNSLRNLFYYEPGPGKMDQLLIPSGDPKNLQTIAEVCARLKVAAKATYSVTALPETFEALKLPAESVDTVVSTYMLNKSKQPLVTFAKAMDMLKDDGVFVFVEPVCGDNPLLGGIRKYLGAIHRATGAFGDPGLDLKNLVNAWAEQVGKAEGIELDLDVEEQSYFLDPHIVGVMYKRKVDRGPDYEPSKSEKRKLARRRGMTTTSKGFGSSS 343          
BLAST of EWM21902.1 vs. NCBI_GenBank
Match: gi|971516126|dbj|GAQ82112.1| (hypothetical protein KFL_001000340 [Klebsormidium nitens])

HSP 1 Score: 70.4774 bits (171), Expect = 2.077e-10
Identity = 70/231 (30.30%), Postives = 99/231 (42.86%), Query Frame = 0
Query:   83 ALLRGPSGVGIFGLTALLIRLYTYFTVQSYIAKLCTLFADNGTT--VELRYGNSL-RNLFYYEPGPGKMDQLLIPSGDPKN--LQTIAEVCARLKVAAKATYSVTALPETFEALKLPAESVDTVVSTYMLNKSKQPLVTFAKAMDMLKDDGVFVFVEPVCGDNPLLGGIRKYLGAIHRATGAFGDPGLDLKNLVNAWAEQVGKAEGIELDLDVEEQSYFLDPHIVGVMYKR 308
            A L G   +  FG+    +R   YF +Q   A +       G    V+L   ++  RNLFY    P    Q+ +  G  K   LQ         ++  +A   V   P     + LP  SVD VV  Y L+ ++       +A  +LK    F+FVE V   N ++ G++  L A+HRATG    P  D    V A +E        E D+ VE    + DPH+VGV  KR
Sbjct:   11 AALAGALSIAGFGV----LRAAVYFRMQYITAAMVARHVPRGGARLVDLSPKDAAGRNLFYL---PKDAVQVTVFDGADKGAYLQ---------ELGIRAGVPVDVRPVPAARMNLPPASVDAVVCVYGLSTTRDAAAVLREAARVLKPGKPFIFVENVASANGVVRGLQAGLAAVHRATGWGAAPDKDSLRDVQAISE-------FE-DIQVERIWDWQDPHVVGVAVKR 217          
BLAST of EWM21902.1 vs. NCBI_GenBank
Match: gi|168055931|ref|XP_001779976.1| (predicted protein [Physcomitrella patens] >gi|162668581|gb|EDQ55185.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 61.2326 bits (147), Expect = 5.572e-7
Identity = 71/264 (26.89%), Postives = 119/264 (45.08%), Query Frame = 0
Query:   83 ALLRGPSGVGIFGLTALLIRLYTYFTVQSYIAKLCTLFADNG--TTVELRYGNSLRNLFYYEPGPGKMDQLLIPSGDPKNLQTIAEVCARLKVAAKATYSVTALPETFEALKLPAESVDTVVSTY-MLNKSKQPLVTFAK-AMDMLKDDGVFVFVEPVCGDNPLLGGIRKYLGAIHRATGAFGDPGLDLKNLVNAWAEQVGKAEGIELDLDVEEQSYFLDPHIVGVMYKRKVDR-----GPDYEPSKSEKRKLARRRGMTTTSK 337
            +L+ G    G+F       R   YF +Q  IA +  L    G    V+   G   RNL+YY   P    Q++  + +PK     A+       AA A   +  LP+     +LPA S+D VVS   M + S + + T  + A+ +LK    F+++E V  +NPL+   ++ +  + +  G       DL + +        K +G E+ +  +    F DPHIVG+  K++        G D  P K++K K+ ++ G++   K
Sbjct:   63 SLVTGALSFGVF-------RTVVYFRMQLIIAHMLALHVPKGGARVVDFSVGEG-RNLYYY---PKDTVQVVGVNPNPKVPMLEAQ-------AAYAKVPIRILPDVS---RLPANSMDAVVSVQGMEDMSDEQVETVLRDAVRVLKPGKKFIYIENVGAENPLVLAAQQSIEGLGKLFGKKYTVTRDLLSFIL-------KTKGFEV-IKYQVVLGFQDPHIVGIATKKQQTTTGAGIGKDTIPKKNKKEKVPQQTGLSDPQK 297          
The following BLAST results are available for this feature:
BLAST of EWM21902.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585102248|gb|EWM21902.1|0.000e+0100.00hypothetical protein Naga_100070g28 [Nannochlorops... [more]
gi|971516126|dbj|GAQ82112.1|2.077e-1030.30hypothetical protein KFL_001000340 [Klebsormidium ... [more]
gi|168055931|ref|XP_001779976.1|5.572e-726.89predicted protein [Physcomitrella patens] >gi|1626... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8802rna8802Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications