EWM21949.1, cds8724 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|553179858|ref|XP_005852774.1| (hypothetical protein NGA_0685100 [Nannochloropsis gaditana CCMP526] >gi|422295757|gb|EKU23056.1| hypothetical protein NGA_0685100 [Nannochloropsis gaditana CCMP526] >gi|585102301|gb|EWM21949.1| protein of unknown function DUF2059 [Nannochloropsis gaditana]) HSP 1 Score: 398.282 bits (1022), Expect = 1.623e-140 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query: 1 MASRLVHVSLALGTTLLILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQEVMMPVMESNVEFYQEQERRAKRGELNDLPETIKLPPQSQKLKDGVYMGNGLSNAQREEM 193
MASRLVHVSLALGTTLLILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQEVMMPVMESNVEFYQEQERRAKRGELNDLPETIKLPPQSQKLKDGVYMGNGLSNAQREEM
Sbjct: 1 MASRLVHVSLALGTTLLILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQEVMMPVMESNVEFYQEQERRAKRGELNDLPETIKLPPQSQKLKDGVYMGNGLSNAQREEM 193
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|501124751|ref|WP_012173848.1| (DUF2059 domain-containing protein [Desulfococcus oleovorans] >gi|158509262|gb|ABW66229.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3]) HSP 1 Score: 78.5666 bits (192), Expect = 3.159e-15 Identity = 47/143 (32.87%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 17 LILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNL-ETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQEVMMPVMESNVEFYQEQERRAKRGE 158
I+C++ T AL+DT NR K A +Y+ P + M+ MA++ + +P P+ RE+ L + LD++ +I + +M KHFT +EL+ L + Y + VGKS M K G Y ++ P IQ ++ ++ E R+ + E
Sbjct: 8 FIICIAATAF-ALEDTPSNRQKEAARYLKTTPPADMMKDMAQKVSMNLP-PENREEFKALLTKHLDLEAFTKIMKDSMEKHFTADELKALADFYGSPVGKSAMNKFGDYMGDIMPAIQAELLKAHAEAIKENAEANRQKQNAE 148
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|501521976|ref|WP_012529913.1| (DUF2059 domain-containing protein [Geobacter bemidjiensis] >gi|197087230|gb|ACH38501.1| hypothetical protein Gbem_1483 [Geobacter bemidjiensis Bem]) HSP 1 Score: 78.1814 bits (191), Expect = 4.892e-15 Identity = 48/142 (33.80%), Postives = 85/142 (59.86%), Query Frame = 0
Query: 15 TLLILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLET--LDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQ-EVMMPVMESNVEFYQEQERR 153
T++++ L +++ AL+DT NR+ A++Y+ P ++ ++ A Q + DP ER Q ++L T LD++ + + + MVKHFT +EL+ L + Y + GKS M K GAY A++ P IQ E++ + ++N E +E +
Sbjct: 7 TIVLVLLMVSVAFALEDTSLNRLTQAERYLEVTPPKDLLQDAAEQMAMNF-DPSER-QAFKDLMTKHLDIEALTKTMKDTMVKHFTADELKALADFYGSVEGKSSMKKFGAYMADVMPSIQAEMLKAISKANREVADTEEEK 146
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|1125137979|gb|OLA95567.1| (hypothetical protein AUH19_09840 [Verrucomicrobia bacterium 13_2_20CM_55_10]) HSP 1 Score: 70.8626 bits (172), Expect = 2.452e-12 Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 0
Query: 12 LGTTLLILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLET-LDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQ-EVM 136
+L L S V DT + R A++Y+ P + E MA + + +P P +R+Q+ R + LD+ + + AMVKHFTTEEL+ L + Y + + KS K GAY A++ P +Q EVM
Sbjct: 6 FALAILTLFTSSAFVLGATDTPETRRHEAERYLQATPPKALFEDMADKMTMNLP-PDQRQQVKRMMTAELDIAALTKAMTDAMVKHFTTEELKALADFYGSPIEKSATQKFGAYMADVMPALQAEVM 131
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|505929475|ref|WP_015720644.1| (DUF2059 domain-containing protein [Geobacter sp. M18] >gi|320126234|gb|ADW13794.1| Protein of unknown function DUF2059 [Geobacter sp. M18]) HSP 1 Score: 70.8626 bits (172), Expect = 2.471e-12 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 28 ALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNL-ETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQE 134
L DTV NR ++Y+ P E + M + ++P P+ RE + + LD++ + + T AMVKHFT +EL L N Y + VGKS M K Y A++ P +QE
Sbjct: 22 CLDDTVANRKVQVERYLKAVPPAELFQDMTEKLATQVP-PENREMFKATMSKNLDLNAITKATSDAMVKHFTADELAALANFYGSPVGKSAMKKFADYMADVMPTLQE 128
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|506318248|ref|WP_015838023.1| (hypothetical protein [Geobacter sp. M21] >gi|251776218|gb|ACT18799.1| conserved hypothetical protein [Geobacter sp. M21]) HSP 1 Score: 68.5514 bits (166), Expect = 1.668e-11 Identity = 43/132 (32.58%), Postives = 77/132 (58.33%), Query Frame = 0
Query: 25 MVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLET--LDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQ-EVMMPVMESNVEFYQEQERR 153
M AL+DT NR+ A++Y+ P ++ + A Q + DP +R Q ++L T LD++ + + + MV+HFT +EL+ L + Y + GKS M K GAY A++ P ++ E++ + ++N E +E++
Sbjct: 1 MAYALEDTSFNRLTQAERYLGVAPPKDLFQDAAEQMAMNF-DPSQR-QAFKDLITKHLDIEALTKTMKDTMVRHFTADELKALADFYGSVEGKSSMKKFGAYMADVMPSVKAEMVKAIAKANREVADIEEKK 130
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|1155015469|ref|WP_078920789.1| (DUF2059 domain-containing protein [Thiothrix eikelboomii] >gi|1152191617|emb|SKA68432.1| hypothetical protein SAMN02745130_00287 [Thiothrix eikelboomii]) HSP 1 Score: 66.2402 bits (160), Expect = 2.139e-10 Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 0
Query: 16 LLILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQEVMM 137
L I L+ T+ AL+D ++NR A +Y+ NP + + +A Q + +P+ + + L + LD+ + + + A++ HFT ELE L N YS K+ +AK+ Y AE+ P +Q M+
Sbjct: 7 LSIFALT-TLAFALEDNLENRQAQAKRYLEANPPKAMAQALADQTVTMLPEAERKPYLDMLTKHLDVKAIHQAMQTALMNHFTANELEVLANFYSNPEAKTALAKMDPYMAEVLPVLQAEML 127
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|658427366|ref|WP_029653721.1| (DUF2059 domain-containing protein [Marinobacter daepoensis]) HSP 1 Score: 63.929 bits (154), Expect = 8.765e-10 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 0
Query: 17 LILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLET-LDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQ-EVMMPVME 141
ILC S + + + A++Y+ P+ + + MA +++P+ ER+ +R + T +D+ + AMVK FT EEL L + Y + VGKS M K G Y A + P IQ E+M V E
Sbjct: 9 FILCASTS----FANEESEKKAAAERYLAATPMSDMLSDMAGNMAMQIPEA-ERDDFIRLMTTEVDVSKLESAALDAMVKTFTLEELNALADFYGSDVGKSAMGKFGTYMAMVMPAIQREIMRAVSE 130
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|1174907392|ref|WP_081580678.1| (DUF2059 domain-containing protein [Salinibacter ruber]) HSP 1 Score: 65.0846 bits (157), Expect = 2.005e-9 Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 0
Query: 2 ASRLVHVSLALGTTLLILCLSMTMV----GALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPD-PKEREQLMRNLETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGP----QIQEVMMPVMESNVE 145
++R+ + A T L+L ++ V G DT NR + A +Y+ PVE+ M + + +MP KER Q + ++ L D +R AM FT EE+E L YST G+SVM K+ Y A++ P +++ M VME+ E
Sbjct: 96 SNRMPSMRYATSITALLLLVTTAGVASAQGTNNDTDANRRQAAKEYLEVQPVEKMMRNVVEKTSARMPGGSKERAQAV--MDELRYDTLRTAMIDAMANTFTVEEIEALTQFYSTPEGRSVMEKMSTYMAKVQPVMMKEVRRSMKQVMEARPE 246
BLAST of EWM21949.1 vs. NCBI_GenBank
Match: gi|294343219|emb|CBH23997.1| (conserved hypothetical protein [Salinibacter ruber M8]) HSP 1 Score: 64.6994 bits (156), Expect = 3.027e-9 Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 0
Query: 2 ASRLVHVSLALGTTLLILCLSMTMV----GALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPD-PKEREQLMRNLETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGP----QIQEVMMPVMESNVE 145
++R+ + A T L+L ++ V G DT NR + A +Y+ PVE+ M + + +MP KER Q + ++ L D +R AM FT EE+E L YST G+SVM K+ Y A++ P +++ M VME+ E
Sbjct: 104 SNRMPSMRYATSITALLLLVTTAGVASAQGTNNDTDANRRQAAKEYLEVQPVEKMMRNVVEKTSARMPGGSKERAQAV--MDELRYDTLRTAMIDAMANTFTVEEIEALTQFYSTPEGRSVMEKMSTYMAKVQPVMMKEVRRSMKQVMEARPE 254 The following BLAST results are available for this feature:
BLAST of EWM21949.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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