rna8744, rna8744 (mRNA) Nannochloropsis gaditana

Overview
Namerna8744
Unique Namerna8744
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length714
Alignment locationKK037250.1:53472..54605 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101212g1.6002.mrna
Orig protein idgnl|cribi|Naga_101212g1.6002
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:53472..54605 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101212g1gene8476Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8744rna8744-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21959.1cds8714Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8744 ID=rna8744|Name=rna8744|organism=Nannochloropsis gaditana|type=mRNA|length=714bp
CCCCCCCCCCTCTTCCCTCGCCCACAGGCTTGCAAGGGCTCGTCTTCTCG
GTCTTGTGGAAGCTCATTGATGATCAGCTTAAGTCAAAGGCTCACATGTA
GGGAGGGAGAGAAGGAGGGAGGGAGGGAGGGAGCGAGGGAGCGAGGGGCA
TTCATGTGCAGAGACGCGGAGGAGTGGGTGGGGGAAAGGTTTCAATTGCG
GGACGAGAAACGAAAGAGAAATGGGGGTGTGTGTGACGGATGGTGTTCTC
GTAAACGAAGAAGAAGCAAGGGAGAGGTGAGTCCTTGGATATGGATAGAG
GAGTGGGAGAGGAGAAATGCGGTGACAACAGCCGGATCGCCTGCTGTTCC
GGCCACGAAAAGCAAGAAAGCGCCGTGTTTGTTGGTCAAAATAAAAAGAA
AAGCAGGACAGAGAGTTGCTCCTGGGAAGTTGGAAGATGAAACGAGCAGG
ACGTGAGGAGGGGGTAGAGAGGCGGTATCATCACTCAGGTGGGGGCCGTG
AAGTGTCTTTCGGAAGATCGTGGGGTCAGGAGGCGTTCTGCACTAACACT
GCACAAGAAAGTAGAACAAGGAGGGAAAAAAATACAGAATGCACTGGATT
GTGTTCTCAGCTTGTGTGTCGTCTCATTACTTGTCCCGTGGCTCTGAGGT
TGATAAATATAAAAACTTGCACGCCTTTTCGCGCCAACAAGGGGATGACG
TGCGAATAACTATG
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protein sequence of rna8744

>rna8744-protein ID=rna8744-protein|Name=rna8744|organism=Nannochloropsis gaditana|type=polypeptide|length=120bp
MAAAAPSSPSPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGAL
MWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFG
DTAANAGVITLLDSFDETKV
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mRNA from alignment at KK037250.1:53472..54605-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8744 ID=rna8744|Name=rna8744|organism=Nannochloropsis gaditana|type=mRNA|length=1134bp|location=Sequence derived from alignment at KK037250.1:53472..54605- (Nannochloropsis gaditana)
CCACGAAGCCCCACGCGTTAAGAGTACGCCATGCCTACGTTCCTGCCACC
TTTTTTATCGTCCGTTGACGGGTGTGTCCTTTGTTCTGGGACCCTTTTGT
CTTGACCGGTACGGCCCTAACTTGCAGTCGAGCGAGGAGACCGCTGAGAC
TGAGAGAAGCCCTGGGGCTTAACTGTGATTTTATTGATGCTAGTCGACAT
TATGTGCATGGATTTTCACCCCACCTCCTGTACCGTCAAGAGAACCTTTT
CCATTCTTTCGCGGGACGGGTTTTGGCCCGTGTGCTCGTCACAGCGCCAT
GTCGACGTTGCGGCCGATGCCTACCCCCCTCCACGCCTAGGAGACAGTGT
TTAGGACTGATTACCTGGACCAAACGGTGGTCATTGCGACGCATTATGCT
GAGAAAAAACGCACAGCTTCTCACACGCAGCCGCCAGGATGATTGACTTC
AGCGTTATACGCGCACGGGGTTGGTCTTCGGAGGGTGCTGTCCATTGGCT
CCCGCCCCCCTCTAATTCCATCTCCTCTTCACATGTACAGTACACCCTCC
TTCTTTCCGTTGTAACATGGCCGCTGCTGCTCCTTCCTCCCCTTCACCTT
CCAGCATGGAGAAGCCGAAGCCTAACGTGGGAGAGATTTTGAAAAAATCG
GCCATGCGCGCTCTTGGGGGTGGCATTTCAGGGGCTGCCGCCATGGGCAT
CAACGTGGGCGCACTCATGTGGCTGAGAACAACCGTCAACTACCAATATC
GCAACGTACGTTTGCATATATATCTTACTTTGCGCTCGCGGACCGGGCGG
GTTCATGGGTTGTGCCAGGAGGGTTCCAGTCATGAGGCGATCTGGAGGCG
CGAAACCCCGTTGCCCCGATGAAAAAAGGGCAGCATAGGAAAGCCACGTC
CACACACCCCTCCATCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCACCC
TCCCTCCCTCAGGGCACGACCATGCGCGTGGCGCTCAAGACGTTGTACGC
GGACGGCGGCATTCCCCGCTTCTACCAGGGACTGCTCCCTGCCCTGGTCC
AGGGCCCGGCCTCCCGATTCGGCGACACGGCGGCCAATGCCGGCGTCATT
ACCCTGCTGGATTCCTTCGACGAGACGAAGGTGC
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Coding sequence (CDS) from alignment at KK037250.1:53472..54605-

>rna8744 ID=rna8744|Name=rna8744|organism=Nannochloropsis gaditana|type=CDS|length=722bp|location=Sequence derived from alignment at KK037250.1:53472..54605- (Nannochloropsis gaditana)
GGCACGACCATGCGCGTGGCGCTCAAGACGTTGTACGCGGACGGCGGCAT
TCCCCGCTTCTACCAGGGACTGCTCCCTGCCCTGGTCCAGGGCCCGGCCT
CCCGATTCGGCGACACGGCGGCCAATGCCGGCGTCATTACCCTGCTGGAT
TCCTTCGACGAGACGAAGGTGCATGGCCGCTGCTGCTCCTTCCTCCCCTT
CACCTTCCAGCATGGAGAAGCCGAAGCCTAACGTGGGAGAGATTTTGAAA
AAATCGGCCATGCGCGCTCTTGGGGGTGGCATTTCAGGGGCTGCCGCCAT
GGGCATCAACGTGGGCGCACTCATGTGGCTGAGAACAACCGTCAACTACC
AATATCGCAACGGCACGACCATGCGCGTGGCGCTCAAGACGTTGTACGCG
GACGGCGGCATTCCCCGCTTCTACCAGGGACTGCTCCCTGCCCTGGTCCA
GGGCCCGGCCTCCCGATTCGGCGACACGGCGGCCAATGCCGGCGTCATTA
CCCTGCTGGATTCCTTCGACGAGACGAAGGTGCATGGCCGCTGCTGCTCC
TTCCTCCCCTTCACCTTCCAGCATGGAGAAGCCGAAGCCTAACGTGGGAG
AGATTTTGAAAAAATCGGCCATGCGCGCTCTTGGGGGTGGCATTTCAGGG
GCTGCCGCCATGGGCATCAACGTGGGCGCACTCATGTGGCTGAGAACAAC
CGTCAACTACCAATATCGCAAC
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Synonyms
Publications