EWM21959.1, cds8714 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|585102319|gb|EWM21959.1| (hypothetical protein Naga_101212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 242.662 bits (618), Expect = 3.601e-81 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MAAAAPSSPSPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETKV 120
MAAAAPSSPSPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETKV
Sbjct: 1 MAAAAPSSPSPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETKV 120
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|224007389|ref|XP_002292654.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971516|gb|EED89850.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 168.703 bits (426), Expect = 9.896e-50 Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 0
Query: 8 SPSPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETK 119
S + + KP+P +GEIL K+A A+ GG +GA AMG+NVGALMW+RTTVNYQYRNGT+ VALKTLYADGGIPRFY+G+LPAL+QGP SRFGDTAAN G++TL++SFD TK
Sbjct: 2 SATTTEETKPQPTLGEILDKAAKSAMRGGTAGAVAMGLNVGALMWMRTTVNYQYRNGTSFPVALKTLYADGGIPRFYRGVLPALIQGPLSRFGDTAANTGMLTLMNSFDATK 113
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|219120731|ref|XP_002181098.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407814|gb|EEC47750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 153.295 bits (386), Expect = 1.102e-43 Identity = 71/105 (67.62%), Postives = 85/105 (80.95%), Query Frame = 0
Query: 15 EKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETK 119
E +P+ EIL KSA A+ GG +GA AMG NV ALMW+RTT+NYQYRNGT+ VAL+ LYADGGIPRFY+G+LPAL QGP SRFGDTAAN G++T+L+S D TK
Sbjct: 15 ESTQPSFREILNKSAASAVRGGTAGAVAMGANVAALMWMRTTINYQYRNGTSFPVALRALYADGGIPRFYRGVLPALAQGPLSRFGDTAANTGILTMLNSLDATK 119
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|633910952|gb|KDD75437.1| (hypothetical protein H632_c685p1 [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 149.828 bits (377), Expect = 6.990e-42 Identity = 76/110 (69.09%), Postives = 87/110 (79.09%), Query Frame = 0
Query: 10 SPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETK 119
SPS EKP + E+LK + RALGGG+ GAAAMGI V +LMWLRTTVNYQYR GTT VALKTLY +GG+ RFY+GL PALVQGP SRFGDTAANAGV+TLL+ T+
Sbjct: 51 SPS--EKPAQPLSEVLKNAGRRALGGGVPGAAAMGIQVLSLMWLRTTVNYQYRYGTTTTVALKTLYKEGGVVRFYRGLGPALVQGPLSRFGDTAANAGVLTLLNEHSSTR 158
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|1210516195|dbj|GAX25011.1| (hypothetical protein FisN_2Lh295 [Fistulifera solaris]) HSP 1 Score: 146.747 bits (369), Expect = 3.585e-41 Identity = 68/110 (61.82%), Postives = 87/110 (79.09%), Query Frame = 0
Query: 10 SPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETK 119
+ +S ++ + +++ K+A AL GG +GA AMG NVGALMW+RTT+NYQYRNGTT AL+TLYADGGIPRFY+G+LPAL+QGP SRFGDTAAN GV+T L+ + TK
Sbjct: 2 TDASKKEEVLSFSQVMNKAAASALRGGTAGAIAMGANVGALMWMRTTINYQYRNGTTFPTALRTLYADGGIPRFYRGVLPALIQGPLSRFGDTAANTGVLTALNGLESTK 111
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|929754464|ref|XP_014152214.1| (hypothetical protein SARC_09248 [Sphaeroforma arctica JP610] >gi|906946802|gb|KNC78312.1| hypothetical protein SARC_09248 [Sphaeroforma arctica JP610]) HSP 1 Score: 147.132 bits (370), Expect = 3.673e-41 Identity = 73/118 (61.86%), Postives = 89/118 (75.42%), Query Frame = 0
Query: 1 MAAAAPSSPSPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDET 118
MAA ++P+ M+KPK ++ EIL + RA+GGG+ GA AMGINV +LMWLRTT+NYQYR GT+ A K LY +GGI RFY+G PAL QGP SRFGDTAANAGV+ LLDS+D T
Sbjct: 1 MAAVDANAPA---MQKPKKSLQEILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTT 115
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|1072221896|gb|OEU06675.1| (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 142.124 bits (357), Expect = 3.882e-39 Identity = 67/97 (69.07%), Postives = 78/97 (80.41%), Query Frame = 0
Query: 23 EILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETK 119
EI+ KSA A+ GG +GA AMG NV ALMW+RTT+NYQYRNG + ALK LY DGGIPRFY+G+LPALVQGP SRFGDTAAN GV+T LD+ + TK
Sbjct: 30 EIMNKSAASAIRGGTAGALAMGANVAALMWMRTTINYQYRNGGSFVGALKHLYGDGGIPRFYRGVLPALVQGPLSRFGDTAANTGVLTFLDNIESTK 126
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|159486799|ref|XP_001701425.1| (mitochondrial carrier protein [Chlamydomonas reinhardtii] >gi|158271727|gb|EDO97541.1| mitochondrial carrier protein [Chlamydomonas reinhardtii]) HSP 1 Score: 143.665 bits (361), Expect = 7.824e-39 Identity = 69/111 (62.16%), Postives = 81/111 (72.97%), Query Frame = 0
Query: 6 PSSPSPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFD 116
P S S K K +GEIL + +AL GG+ G AMGI V +LMWLRTT+NYQYR GTT AL+TLY+ GGIPRFYQGLLPAL+QGP SRFGDTAAN G++ LL+ D
Sbjct: 99 PKQASGSVAPKKKKEIGEILSTAGKKALSGGVPGMVAMGIQVLSLMWLRTTINYQYRYGTTTMEALRTLYSQGGIPRFYQGLLPALIQGPLSRFGDTAANTGMLALLEDVD 209
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|1210514425|dbj|GAX26755.1| (hypothetical protein FisN_2Hh295 [Fistulifera solaris]) HSP 1 Score: 139.428 bits (350), Expect = 3.027e-38 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0
Query: 10 SPSSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTV----------NYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETK 119
+ +S ++ + +++ K+A AL GG +GA AMG NVGALMW+RTTV NYQYRNGTT AL+TLYADGGIPRFY+G+LPAL+QGP SRFGDTAAN GV+T L+ + TK
Sbjct: 2 TDASKKEEVLSFSQVMNKAAASALRGGTAGAIAMGANVGALMWMRTTVSLCLLSFCCINYQYRNGTTFPTALRTLYADGGIPRFYRGVLPALIQGPLSRFGDTAANTGVLTALNGLESTK 121
BLAST of EWM21959.1 vs. NCBI_GenBank
Match: gi|302853064|ref|XP_002958049.1| (mitochondrial substrate carrier [Volvox carteri f. nagariensis] >gi|300256627|gb|EFJ40889.1| mitochondrial substrate carrier [Volvox carteri f. nagariensis]) HSP 1 Score: 140.198 bits (352), Expect = 1.203e-37 Identity = 68/122 (55.74%), Postives = 86/122 (70.49%), Query Frame = 0
Query: 1 MAAAAPSSPSPSSM------EKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFD 116
+AA + P+P ++ K ++GE++ + +AL GG+ G AM I V +LMWLRTT+NYQYR GTT ALKTLYA GGIPRFYQGLLPAL+QGP SRFGDTAAN G++ LL+ D
Sbjct: 88 LAAVTLAQPAPKQETGTVAGKQNKKSIGEVISLAGKKALSGGVPGMVAMAIQVLSLMWLRTTINYQYRYGTTTMEALKTLYAQGGIPRFYQGLLPALIQGPLSRFGDTAANTGMLALLEDVD 209 The following BLAST results are available for this feature:
BLAST of EWM21959.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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