EWM21962.1, cds8712 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|585102323|gb|EWM21962.1| (hypothetical protein Naga_101140g3 [Nannochloropsis gaditana]) HSP 1 Score: 233.032 bits (593), Expect = 1.204e-77 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
Query: 1 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEGGGGSRVVRYRKEIR 115
MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEGGGGSRVVRYRKEIR
Sbjct: 1 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEGGGGSRVVRYRKEIR 115
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|553189422|ref|XP_005854999.1| (hypothetical protein NGA_2119800, partial [Nannochloropsis gaditana CCMP526] >gi|422294064|gb|EKU21364.1| hypothetical protein NGA_2119800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 206.068 bits (523), Expect = 7.682e-67 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query: 1 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEG 101
MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEG
Sbjct: 24 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEG 124
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|673036266|ref|XP_008872094.1| (hypothetical protein H310_08201 [Aphanomyces invadans] >gi|574472533|gb|ETV99538.1| hypothetical protein H310_08201 [Aphanomyces invadans]) HSP 1 Score: 64.3142 bits (155), Expect = 2.987e-11 Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 0
Query: 8 LRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
LRV HFPR PKAC+ E FFAC G+Q + +D +AG++G+ C ++++AY+ C+ KV K FRV + YR
Sbjct: 11 LRVSPHFPRVPKACKSVGETFFACLYKHGKQ------PEGVSDPDAGKKGMQSCVRQLEAYNACVDKVFADKPRK---MFRVPEAYR 88
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|1173934683|gb|OQR85940.1| (hypothetical protein ACHHYP_11157 [Achlya hypogyna]) HSP 1 Score: 63.5438 bits (153), Expect = 5.335e-11 Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 0
Query: 4 QDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
D RV HFPR PKAC+ AE FFAC G+Q EG +D +AG + +A C + + AY+ C+ K FRV + YR
Sbjct: 2 SDAPFRVSPHFPRAPKACKAVAEPFFACLHQHGKQP----EG--VSDPDAGTKAMATCSELLTAYNKCVDTAFASKPKK---LFRVPEAYR 83
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|669151376|ref|XP_008611250.1| (hypothetical protein SDRG_07208 [Saprolegnia diclina VS20] >gi|530737258|gb|EQC35500.1| hypothetical protein SDRG_07208 [Saprolegnia diclina VS20]) HSP 1 Score: 64.3142 bits (155), Expect = 9.754e-11 Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 0
Query: 2 TSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
+ + LRV FPR PKAC+ AE FF C S G+Q EG +D +AG + +A C +++AY+ C+ + + K FRV + YR
Sbjct: 3 SPSETPLRVSPFFPRAPKACKAVAEPFFTCLHSHGKQP----EGV--SDPDAGTKAMAICAAQLQAYNQCVDQALTNKPKK---LFRVPEAYR 86
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|675168853|ref|XP_008893311.1| (hypothetical protein PPTG_01681 [Phytophthora parasitica INRA-310] >gi|566022189|gb|ETI45100.1| hypothetical protein F443_10231 [Phytophthora parasitica P1569] >gi|568047845|gb|ETM44913.1| hypothetical protein L914_09888 [Phytophthora parasitica] >gi|568106896|gb|ETN21526.1| hypothetical protein PPTG_01681 [Phytophthora parasitica INRA-310] >gi|570983089|gb|ETP42984.1| hypothetical protein F442_10134 [Phytophthora parasitica P10297]) HSP 1 Score: 60.077 bits (144), Expect = 1.037e-9 Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = 0
Query: 3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
+ ELRV ++FPR PK C A KFFACF G+Q K +D EAG L +C+ + AY+ C+ + FRV + YR
Sbjct: 2 TDTTELRVSENFPRVPKPCEKVATKFFACFYEHGKQ------PKGESDPEAGNVALDKCKDALLAYNTCVDTEL---AKNPKQLFRVPEAYR 84
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|695432916|ref|XP_009531055.1| (hypothetical protein PHYSODRAFT_547153 [Phytophthora sojae] >gi|348673807|gb|EGZ13626.1| hypothetical protein PHYSODRAFT_547153 [Phytophthora sojae]) HSP 1 Score: 63.929 bits (154), Expect = 1.219e-9 Identity = 37/93 (39.78%), Postives = 47/93 (50.54%), Query Frame = 0
Query: 3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCM-AKVVKGKGGGKDWFFRVQDEYR 94
+ ELRV +HFPR PK C A KFFACF G+Q A +D E G L C+ + AY+ C+ A+V K FRV + YR
Sbjct: 224 ADSNELRVSEHFPRVPKPCEKVATKFFACFYEHGKQPA------GQSDTEVGNVALETCKDSLLAYNACVDAEVAK----SPKELFRVPEAYR 306
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|970657973|gb|KUF95793.1| (Thiosulfate sulfurtransferase/rhodanese domain-containing protein 2 [Phytophthora nicotianae]) HSP 1 Score: 60.8474 bits (146), Expect = 1.632e-9 Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = 0
Query: 3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
+ ELRV ++FPR PK C A KFFACF G+Q K +D EAG L +C+ + AY+ C+ + FRV + YR
Sbjct: 51 TDTTELRVSENFPRVPKPCEKVATKFFACFYEHGKQ------PKGESDPEAGNVALDKCKDALLAYNTCVDTEL---AKNPKQLFRVPEAYR 133
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|567959505|gb|ETK85076.1| (hypothetical protein L915_10009 [Phytophthora parasitica] >gi|567988219|gb|ETL38500.1| hypothetical protein L916_09914 [Phytophthora parasitica] >gi|568017451|gb|ETL91628.1| hypothetical protein L917_09835 [Phytophthora parasitica] >gi|570325764|gb|ETO73712.1| hypothetical protein F444_10331 [Phytophthora parasitica P1976] >gi|570949661|gb|ETP14918.1| hypothetical protein F441_10167 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 60.4622 bits (145), Expect = 5.275e-9 Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = 0
Query: 3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
+ ELRV ++FPR PK C A KFFACF G+Q K +D EAG L +C+ + AY+ C+ + FRV + YR
Sbjct: 94 TDTTELRVSENFPRVPKPCEKVATKFFACFYEHGKQ------PKGESDPEAGNVALDKCKDALLAYNTCVDTEL---AKNPKQLFRVPEAYR 176
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|953502034|emb|CEG36965.1| (hypothetical protein PHALS_04214 [Plasmopara halstedii]) HSP 1 Score: 58.151 bits (139), Expect = 6.622e-9 Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0
Query: 7 ELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGC 71
ELRV ++FP PKAC A KFFACF G+Q+A GK +D E G L +C+ + AY+ C
Sbjct: 3 ELRVSENFPSAPKACENVANKFFACFYEHGKQQA----GK--SDTEVGNVALEKCKDMLLAYNTC 61 The following BLAST results are available for this feature:
BLAST of EWM21962.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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