EWM21962.1, cds8712 (CDS) Nannochloropsis gaditana

Overview
NameEWM21962.1
Unique Namecds8712
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:51073..51420 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21962.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101140g3.9850.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:51073..51420 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|585102323|gb|EWM21962.1| (hypothetical protein Naga_101140g3 [Nannochloropsis gaditana])

HSP 1 Score: 233.032 bits (593), Expect = 1.204e-77
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
Query:    1 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEGGGGSRVVRYRKEIR 115
            MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEGGGGSRVVRYRKEIR
Sbjct:    1 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEGGGGSRVVRYRKEIR 115          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|553189422|ref|XP_005854999.1| (hypothetical protein NGA_2119800, partial [Nannochloropsis gaditana CCMP526] >gi|422294064|gb|EKU21364.1| hypothetical protein NGA_2119800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 206.068 bits (523), Expect = 7.682e-67
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEG 101
            MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEG
Sbjct:   24 MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKEG 124          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|673036266|ref|XP_008872094.1| (hypothetical protein H310_08201 [Aphanomyces invadans] >gi|574472533|gb|ETV99538.1| hypothetical protein H310_08201 [Aphanomyces invadans])

HSP 1 Score: 64.3142 bits (155), Expect = 2.987e-11
Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    8 LRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
            LRV  HFPR PKAC+   E FFAC    G+Q       +  +D +AG++G+  C ++++AY+ C+ KV   K       FRV + YR
Sbjct:   11 LRVSPHFPRVPKACKSVGETFFACLYKHGKQ------PEGVSDPDAGKKGMQSCVRQLEAYNACVDKVFADKPRK---MFRVPEAYR 88          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|1173934683|gb|OQR85940.1| (hypothetical protein ACHHYP_11157 [Achlya hypogyna])

HSP 1 Score: 63.5438 bits (153), Expect = 5.335e-11
Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 0
Query:    4 QDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
             D   RV  HFPR PKAC+  AE FFAC    G+Q     EG   +D +AG + +A C + + AY+ C+      K       FRV + YR
Sbjct:    2 SDAPFRVSPHFPRAPKACKAVAEPFFACLHQHGKQP----EG--VSDPDAGTKAMATCSELLTAYNKCVDTAFASKPKK---LFRVPEAYR 83          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|669151376|ref|XP_008611250.1| (hypothetical protein SDRG_07208 [Saprolegnia diclina VS20] >gi|530737258|gb|EQC35500.1| hypothetical protein SDRG_07208 [Saprolegnia diclina VS20])

HSP 1 Score: 64.3142 bits (155), Expect = 9.754e-11
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 0
Query:    2 TSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
            +  +  LRV   FPR PKAC+  AE FF C  S G+Q     EG   +D +AG + +A C  +++AY+ C+ + +  K       FRV + YR
Sbjct:    3 SPSETPLRVSPFFPRAPKACKAVAEPFFTCLHSHGKQP----EGV--SDPDAGTKAMAICAAQLQAYNQCVDQALTNKPKK---LFRVPEAYR 86          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|675168853|ref|XP_008893311.1| (hypothetical protein PPTG_01681 [Phytophthora parasitica INRA-310] >gi|566022189|gb|ETI45100.1| hypothetical protein F443_10231 [Phytophthora parasitica P1569] >gi|568047845|gb|ETM44913.1| hypothetical protein L914_09888 [Phytophthora parasitica] >gi|568106896|gb|ETN21526.1| hypothetical protein PPTG_01681 [Phytophthora parasitica INRA-310] >gi|570983089|gb|ETP42984.1| hypothetical protein F442_10134 [Phytophthora parasitica P10297])

HSP 1 Score: 60.077 bits (144), Expect = 1.037e-9
Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = 0
Query:    3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
            +   ELRV ++FPR PK C   A KFFACF   G+Q       K  +D EAG   L +C+  + AY+ C+   +          FRV + YR
Sbjct:    2 TDTTELRVSENFPRVPKPCEKVATKFFACFYEHGKQ------PKGESDPEAGNVALDKCKDALLAYNTCVDTEL---AKNPKQLFRVPEAYR 84          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|695432916|ref|XP_009531055.1| (hypothetical protein PHYSODRAFT_547153 [Phytophthora sojae] >gi|348673807|gb|EGZ13626.1| hypothetical protein PHYSODRAFT_547153 [Phytophthora sojae])

HSP 1 Score: 63.929 bits (154), Expect = 1.219e-9
Identity = 37/93 (39.78%), Postives = 47/93 (50.54%), Query Frame = 0
Query:    3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCM-AKVVKGKGGGKDWFFRVQDEYR 94
            +   ELRV +HFPR PK C   A KFFACF   G+Q A        +D E G   L  C+  + AY+ C+ A+V K         FRV + YR
Sbjct:  224 ADSNELRVSEHFPRVPKPCEKVATKFFACFYEHGKQPA------GQSDTEVGNVALETCKDSLLAYNACVDAEVAK----SPKELFRVPEAYR 306          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|970657973|gb|KUF95793.1| (Thiosulfate sulfurtransferase/rhodanese domain-containing protein 2 [Phytophthora nicotianae])

HSP 1 Score: 60.8474 bits (146), Expect = 1.632e-9
Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = 0
Query:    3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
            +   ELRV ++FPR PK C   A KFFACF   G+Q       K  +D EAG   L +C+  + AY+ C+   +          FRV + YR
Sbjct:   51 TDTTELRVSENFPRVPKPCEKVATKFFACFYEHGKQ------PKGESDPEAGNVALDKCKDALLAYNTCVDTEL---AKNPKQLFRVPEAYR 133          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|567959505|gb|ETK85076.1| (hypothetical protein L915_10009 [Phytophthora parasitica] >gi|567988219|gb|ETL38500.1| hypothetical protein L916_09914 [Phytophthora parasitica] >gi|568017451|gb|ETL91628.1| hypothetical protein L917_09835 [Phytophthora parasitica] >gi|570325764|gb|ETO73712.1| hypothetical protein F444_10331 [Phytophthora parasitica P1976] >gi|570949661|gb|ETP14918.1| hypothetical protein F441_10167 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 60.4622 bits (145), Expect = 5.275e-9
Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = 0
Query:    3 SQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYR 94
            +   ELRV ++FPR PK C   A KFFACF   G+Q       K  +D EAG   L +C+  + AY+ C+   +          FRV + YR
Sbjct:   94 TDTTELRVSENFPRVPKPCEKVATKFFACFYEHGKQ------PKGESDPEAGNVALDKCKDALLAYNTCVDTEL---AKNPKQLFRVPEAYR 176          
BLAST of EWM21962.1 vs. NCBI_GenBank
Match: gi|953502034|emb|CEG36965.1| (hypothetical protein PHALS_04214 [Plasmopara halstedii])

HSP 1 Score: 58.151 bits (139), Expect = 6.622e-9
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    7 ELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGADKEAGRRGLAECQKEMKAYDGC 71
            ELRV ++FP  PKAC   A KFFACF   G+Q+A    GK  +D E G   L +C+  + AY+ C
Sbjct:    3 ELRVSENFPSAPKACENVANKFFACFYEHGKQQA----GK--SDTEVGNVALEKCKDMLLAYNTC 61          
The following BLAST results are available for this feature:
BLAST of EWM21962.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102323|gb|EWM21962.1|1.204e-77100.00hypothetical protein Naga_101140g3 [Nannochloropsi... [more]
gi|553189422|ref|XP_005854999.1|7.682e-67100.00hypothetical protein NGA_2119800, partial [Nannoch... [more]
gi|673036266|ref|XP_008872094.1|2.987e-1139.08hypothetical protein H310_08201 [Aphanomyces invad... [more]
gi|1173934683|gb|OQR85940.1|5.335e-1138.46hypothetical protein ACHHYP_11157 [Achlya hypogyna... [more]
gi|669151376|ref|XP_008611250.1|9.754e-1136.56hypothetical protein SDRG_07208 [Saprolegnia dicli... [more]
gi|675168853|ref|XP_008893311.1|1.037e-936.96hypothetical protein PPTG_01681 [Phytophthora para... [more]
gi|695432916|ref|XP_009531055.1|1.219e-939.78hypothetical protein PHYSODRAFT_547153 [Phytophtho... [more]
gi|970657973|gb|KUF95793.1|1.632e-936.96Thiosulfate sulfurtransferase/rhodanese domain-con... [more]
gi|567959505|gb|ETK85076.1|5.275e-936.96hypothetical protein L915_10009 [Phytophthora para... [more]
gi|953502034|emb|CEG36965.1|6.622e-946.15hypothetical protein PHALS_04214 [Plasmopara halst... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8741rna8741Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications