rna8741, rna8741 (mRNA) Nannochloropsis gaditana

Overview
Namerna8741
Unique Namerna8741
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1231
Alignment locationKK037250.1:50941..52336 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101140g3.9850.mrna
Orig protein idgnl|cribi|Naga_101140g3.9850
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:50941..52336 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101140g3gene8473Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21962.1cds8712Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8741rna8741-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8741 ID=rna8741|Name=rna8741|organism=Nannochloropsis gaditana|type=mRNA|length=1231bp
GGGGCGACGGTGGTGATGCCGTCGACGACGCTGACGGCGCCCCCCACGGT
GGTGGTCCCCTACCTCCCTGCTGGCCGTTACACGCTGGCGCCCGGAACCG
TGGCCTTCGTCCTACCCGAGAGTAAATGCCGACTGGTCCGGCAACAGGTG
CAGCGTCGGCGAGGCGCGGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGA
GGGAGGGAAGGCGGCCTTGGGACCCACAGTGTCCTATCTGCCCGATTCGT
TGCGTATGATGGAAGAGGGCCCCGAGGAGTCCGAGGGAGGAGGAGGAGGA
AGAGGAGGAGGGGGAGGGAGGAGGTCGCAGTCCTCCCGGGCCTTATTTGG
CTTCGACGAGGAGGAGGGGGCGACCCAGGTCAAGGATATGCTCGAGGAAG
AGCAGCTCCATCGCCTGGTGGAGAGCCGTTTGCACCCGTTGGGGATGGTG
GGGGCGCCGGTAGCCTTGGCGGGTACCTCTTCCATCATCCTCCCGGTGCG
GGCAGAGGAGGTCGGAAGAGAGGGAGGGAGGGAGGGAGGGGAAGGAGCGA
GGAGGGGCGATGGCGGGGGGGCTGCCGGGGGCCGGACGAAGAGCGTGACC
TTCGGAGGGGTGGCAGGGGTGGCACAAGAGGATAGCGGGAAGGAGGGAGG
GGAGGAGGAGGGGGAAGAGGAGGAGGAGGAAGACGACGGCTTGTTTCAGC
TTCGAATGAGTCGCGTGCTGTCGAAGGGGGGGACGTTGAAAAAAGGGGGC
TAGAGCAGAAAGTGTGGAGAAAAAAGTGGGGGAGGGAGAAAGGGAGGGAG
ACATGGGAGGAGAGGGCTGCGGCAATGGACGAGCGCCGACGGGGGCTGTG
CATGGAATCACGAGGAAGGCTTGAGTGAGGATGGAAAGGGAGGAGGAGAT
GCGGGCGGCTTTGTGTGGAATGCAAACGTAGAGTGACAAAGAATCTTGAA
TTTCGATCGTGCTTGAGGGAAAGGGGAGGGAAGTGATGAGTGAAGATGAG
GAAGGGGTTGCGCGCGCTTTCTCTTTCGAGGACGAGGGAGAGCTGTACGA
GACCCCAGAAAATGACACGTCAGCATCCTCCGCACTCCCCGCCTTGCCGT
CTTCCGTTTCAACGAATTTCTTTTCTGTATCTTACGACCCTACTTCCCCC
CCCCCCCTCTTTCAAATTCTCGCGCCGGTACTCGTCCTGCACACGGAAGA
ACCAATCCTTTCCTCCCCCTTTTCCCTTCAC
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protein sequence of rna8741

>rna8741-protein ID=rna8741-protein|Name=rna8741|organism=Nannochloropsis gaditana|type=polypeptide|length=115bp
MTSQDGELRVGDHFPRHPKACRVPAEKFFACFSSKGEQRATALEGKAGAD
KEAGRRGLAECQKEMKAYDGCMAKVVKGKGGGKDWFFRVQDEYRRENLKE
GGGGSRVVRYRKEIR
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mRNA from alignment at KK037250.1:50941..52336-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8741 ID=rna8741|Name=rna8741|organism=Nannochloropsis gaditana|type=mRNA|length=1396bp|location=Sequence derived from alignment at KK037250.1:50941..52336- (Nannochloropsis gaditana)
AATGCTTCTTATGGTCGCGTGGTGGGTAAATTTCCAGCGACTTTTTTCTC
ATCTTTTTGAATGGACAGGATGGGCCGTGCGAAAATTTTCCCCGCCTGCC
TGAAAATTACGTGCACGTCGTGAGCGACTTAAGGGATGGATCCGTACGCC
CCGCCTGAAAGTTACTCCCCTTTTCACTTGACGTGGCAAGAACATGCGAA
ATGGAAATGGAGGCCTTATTCAGTTTACATTTCGAGGCGCCATCTCTCTC
TTCGTGGTGGCCTCGCTGAGCGAGAAGCTTTGCAGCGTCGCCAGGGTTGC
CACCACATCAGAATGTTTCCCCTTGCGATTGAACAGGACTGGTGGTCATT
GGTATGGCGACAATAGACTACTGGTACAGCAACACCCTCTGGCTCGAAGA
ATTGGGCGGCTGTTTACTCATTCTTTCGGTGAATGGGCTTAAAGTTCAGG
GCGGATTCCATAATCGTCCAACCTCCCCCCTGGAAAGCAGCGTACGCTTT
GTGTGCCTTATTCACTGCGTTCTTGTTAAAAATGCACTGAACGTGTTTTA
CCTTGGGATTTAGGGTACATTTATACACACTAAAGATATGTCGAGTACGA
ACATCTCGTGAGGGCCCGCTGCCGGTCACGGTGCCTATGCCCCGGTGCCT
TGTTTTTGGCTTGAAGAGGCTTACCCTGTTTAGTCAAGTATTGACACCTC
GTACCAGACGAGACTGAATTCATCACTTTAGCCTGGCCTTTGCTATTTGC
AGTACCGCTCAAAGTGTGTTCATCTTGGGACAAGCGACAAGGCATATTCC
ATTCTTCATTCCTTCACTCTCTTTCCTTCCCCCACACTCTGCGCCACAAA
GCTTGCTTGATACTCCCTGGCTGTCTTACAGCCCGCGACCCCTTCTTTCC
TCCCGCTGACTGGACCATGACTTCCCAGGACGGAGAGCTCCGAGTGGGCG
ATCATTTCCCCCGCCACCCCAAAGCCTGTCGCGTGCCCGCTGAGAAGTTC
TTCGCGTGCTTCTCATCCAAAGGGGAACAGCGCGCTACGGCCTTGGAGGG
CAAAGCTGGGGCGGACAAGGAGGCGGGACGACGGGGTTTGGCGGAGTGCC
AGAAGGAAATGAAGGCCTACGATGGCTGCATGGCCAAGGTGGTGAAGGGA
AAAGGGGGAGGAAAGGATTGGTTCTTCCGTGTGCAGGACGAGTACCGGCG
CGAGAATTTGAAAGAGGGGGGGGGGGGAAGTAGGGTCGTAAGATACAGAA
AAGAAATTCGTTGAAACGGAAGACGGCAAGGCGGGGAGTGCGGAGGATGC
TGACGTGTCATTTTCTGGGGTCTCGTACAGCTCTCCCTCGTCCTCGAAAG
AGAAAGCGCGCGCAACCCCTTCCTCATCTTCACTCATCACTTCCCT
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Coding sequence (CDS) from alignment at KK037250.1:50941..52336-

>rna8741 ID=rna8741|Name=rna8741|organism=Nannochloropsis gaditana|type=CDS|length=348bp|location=Sequence derived from alignment at KK037250.1:50941..52336- (Nannochloropsis gaditana)
ATGACTTCCCAGGACGGAGAGCTCCGAGTGGGCGATCATTTCCCCCGCCA
CCCCAAAGCCTGTCGCGTGCCCGCTGAGAAGTTCTTCGCGTGCTTCTCAT
CCAAAGGGGAACAGCGCGCTACGGCCTTGGAGGGCAAAGCTGGGGCGGAC
AAGGAGGCGGGACGACGGGGTTTGGCGGAGTGCCAGAAGGAAATGAAGGC
CTACGATGGCTGCATGGCCAAGGTGGTGAAGGGAAAAGGGGGAGGAAAGG
ATTGGTTCTTCCGTGTGCAGGACGAGTACCGGCGCGAGAATTTGAAAGAG
GGGGGGGGGGGAAGTAGGGTCGTAAGATACAGAAAAGAAATTCGTTGA
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Synonyms
Publications