rna8702, rna8702 (mRNA) Nannochloropsis gaditana

Overview
Namerna8702
Unique Namerna8702
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1156
Alignment locationKK037249.1:625500..626295 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101576g2.1484.mrna
Orig protein idgnl|cribi|Naga_101576g2.1484
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:625500..626295 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101576g2gene8435Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8702rna8702-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22000.1cds8673Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8702 ID=rna8702|Name=rna8702|organism=Nannochloropsis gaditana|type=mRNA|length=1156bp
CCCTTCCTCCCTCCCTCCCTCCCTCCCTCTTTCCCTCCCTCCCTCCCTCT
TTCCCTCCCTCCCTTCTGCCTTGCTTGTCTGTATGCCCCTGCGTTGTTCT
TATCCCACCCTCGAACTCCTCATCTTTCTCCCATTCTTTCCTCAAATTTC
GTCTATTCTTTAGGAGGGCCGCCTGGTCGAGGCATTGCGAACGCTTCGCG
CAATTTTTGCTTCCGCCCACAGCATGAAAGGCACCACCGTCTCCGCCATT
CAAGGACCTTTGCTGCAGGCAATTGTGGACGCCACGAATCTCCGCCTTGC
CGATCTCTCTCGGCCTCTTTCGAGAATAAAGCCTGACTTCTCATGCCCTC
GTTCCGTTTTCCCTTCCGCCGCAGCTTCTCACCGTGCCGCAGTCTGCTAT
CTTCTTCATGAATGGCTTCGCTCGCTAAGCCCAGATCTCTTTCCCTCCTT
CCCGCAATCCGAATCCTCGTACCGGGAGCAAATACGAGCTGCAGGGGGCG
AGGAGGAGGAGGGAAACATAGGGGACGAGGAGAACGTCGTCAGCCGCCAC
TACGAACAATTCGCGGAAACGATCCCAGTCTTTCCGTTCGAGGCATATAA
TTTCTCTTCGCCTTCCGTAGCCGCTACACTCGCCCAACAAATTTATGGTT
ATTCTGGGGTCGGGCACAGAGAGAAGAAATAAAGAATTGTATAAAAAATT
CGGAAGTTTCCAAGTGGTGAAAAGAAAGGGTACGTCGTACATGTATAAGG
TTTGAGTCATTTTACCGAGTCGTTATTTAGGTCTATTCAAGGAAGTTTTA
GTTTTGGAGTCAATTCATGTATACACCAGGGAAGAATTTGGTGAAAGATA
CAGGAATGATCAGCTAGTCTTATATCGTAATATCTACTTTCACTATCGTT
TAGCATCTAGACTGGCCCCCGATGTGCACTTCGACACGGGATTAATGAGA
ACTTATTTGCATTCCGACGCTAAGCGTGATTCAATGAACGTCGCATCAAT
TTGCTTGAAAGTGTATTCCCGTGCCAATGATTCAACAAATGATAGTTGTC
CTTCAACGTCGATCAACATGCTTAGGTCTAGCAAGATCAATTCTTATTGA
TTTACATCACGTCTTTCTGCATGTTTCCGCAAAAGGGGTCAGATCCAATA
TTTCCG
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protein sequence of rna8702

>rna8702-protein ID=rna8702-protein|Name=rna8702|organism=Nannochloropsis gaditana|type=polypeptide|length=77bp
MPSNNKAHYFPYSGIVTRVKESSILPIVVWRRGNGSLCSSSHASFFRTRP
CPTSSRTWGVRSVFLRCGARTLPPNQR
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mRNA from alignment at KK037249.1:625500..626295-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8702 ID=rna8702|Name=rna8702|organism=Nannochloropsis gaditana|type=mRNA|length=796bp|location=Sequence derived from alignment at KK037249.1:625500..626295- (Nannochloropsis gaditana)
ATGCCTTCCAACAATAAAGCACATTATTTTCCTTACAGCGGAATTGTGAC
GAGAGTCAAGGAATCCAGCATTTTGCCTATTGTGGTCTGGCGGCGTGGCA
ATGGCTCCCTCTGCAGCTCCTCTCACGCATCATTTTTTAGAACTCGTCCC
TGCCCGACATCGTCCCGTACTTGGGGAGTACGATCAGGTAAAGACGGGGT
GGTCAATTGCAGGTGGCGATGAGTGTTGCCGGCAAAGTCCGCGTTGTGTT
CGTTTCTTGGCTTTCGACTTCTCCTGCGTCTCTCTCCCCTTACAGTATTT
TTACGATGCGGCGCAAGAACACTTCCTCCTAATCAAAGATAATATGTATA
GAATTTTGCCACGGGGAGCCTCAAGACCTTCACAGCGTACGTTTTGGGTA
AAATACCTTTCTGCGGCTTTTGACGGGAGCATTGTCTCCCCTCCTCCCTC
CTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTTATCCCGCCTTCCCTCTTT
CTGGTCGTTGCTTGTGGTTCCTCTGCTGCATCAAGAACATCCAAGCATCT
ACTGACCCGCCTTGCTCTCCCATACCTGCCCTGCCCTCCCACCCTCCCGC
CCTCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGCCCTCCC
GCCCTCCCTTTCCCTTTTCCTTTCCTGCCCAACCCTACAGCTGTGCATTA
CGACAGCACGGGACGCGACTGCCTCTATGCTATCATGTCACTTGACAACA
CCTTGCTTGCCATCCAGCGCAACCGCTGCTGGGTCGAGGTAGGGAG
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Coding sequence (CDS) from alignment at KK037249.1:625500..626295-

>rna8702 ID=rna8702|Name=rna8702|organism=Nannochloropsis gaditana|type=CDS|length=468bp|location=Sequence derived from alignment at KK037249.1:625500..626295- (Nannochloropsis gaditana)
TATTTTTACGATGCGGCGCAAGAACACTTCCTCCTAATCAAAGATAAATG
CCTTCCAACAATAAAGCACATTATTTTCCTTACAGCGGAATTGTGACGAG
AGTCAAGGAATCCAGCATTTTGCCTATTGTGGTCTGGCGGCGTGGCAATG
GCTCCCTCTGCAGCTCCTCTCACGCATCATTTTTTAGAACTCGTCCCTGC
CCGACATCGTCCCGTACTTGGGGAGTACGATCAGTATTTTTACGATGCGG
CGCAAGAACACTTCCTCCTAATCAAAGATAAATGCCTTCCAACAATAAAG
CACATTATTTTCCTTACAGCGGAATTGTGACGAGAGTCAAGGAATCCAGC
ATTTTGCCTATTGTGGTCTGGCGGCGTGGCAATGGCTCCCTCTGCAGCTC
CTCTCACGCATCATTTTTTAGAACTCGTCCCTGCCCGACATCGTCCCGTA
CTTGGGGAGTACGATCAG
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Synonyms
Publications