EWM22000.1, cds8673 (CDS) Nannochloropsis gaditana

Overview
NameEWM22000.1
Unique Namecds8673
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:626109..626295 -
Alignment locationKK037249.1:625954..626000 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22000.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101576g2.1484.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:626109..626295 -
KK037249.1supercontigKK037249.1:625954..626000 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22000.1 vs. NCBI_GenBank
Match: gi|585102393|gb|EWM22000.1| (hypothetical protein Naga_101576g2 [Nannochloropsis gaditana])

HSP 1 Score: 157.532 bits (397), Expect = 7.554e-49
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 
Query:    1 MPSNNKAHYFPYSGIVTRVKESSILPIVVWRRGNGSLCSSSHASFFRTRPCPTSSRTWGVRSVFLRCGARTLPPNQR 77
            MPSNNKAHYFPYSGIVTRVKESSILPIVVWRRGNGSLCSSSHASFFRTRPCPTSSRTWGVRSVFLRCGARTLPPNQR
Sbjct:    1 MPSNNKAHYFPYSGIVTRVKESSILPIVVWRRGNGSLCSSSHASFFRTRPCPTSSRTWGVRSVFLRCGARTLPPNQR 77
The following BLAST results are available for this feature:
BLAST of EWM22000.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102393|gb|EWM22000.1|7.554e-49100.00hypothetical protein Naga_101576g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8702rna8702Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications