|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100353g6.3231.mrna |
| Orig protein id | gnl|cribi|Naga_100353g6.3231 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:620510..621371 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8700 ID=rna8700|Name=rna8700|organism=Nannochloropsis gaditana|type=mRNA|length=903bp
ATGTACGAGATGGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGT
GTGCGAGGCCGATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACC
CCGTAAACATCTTGTCGAAAGGAAAATGCTTTTGGTACACAATTTGTTGT
GATTGCTTTATCTTTTGCCGCACAAGCAATGTTCCACATCTGATCCTTCT
CTTTCGACGCCACAGGAACTTAACCAAGCGTACCATCATGCGACGTGGTC
TTTCTTTGCTCGCCTTGGGGCTTACCCTTGCGCTTACCACCGGACAAATG
CTCTCCCTCAAGTCCATCAAGACGTTCGAAAGGACGCAGATGAATAAAGA
CAAGTGGAGCATGAAGGCCCACCTGGAGGATCCCACTCTTGCTGTGGTGT
CCGGCATTGGCACAAGTGGTCTGACTGTGACGCTGCTCGATACGGCGGAT
GACACCTTGGACACAGCGACCTTCGCGGCGGGCGACTGCATGGTGCGGAA
GAACTCCAAGGGGGCGAGGTGCAAGATGATGGGGGCACGCGTGTCAATCA
GGGCCAGCAAGCCCCCCAAGGGTGTAGGAAAGTCGCACAACTCGACGGGA
GGATACTACAGCGTGTCAGGCAGCTTCCGACGTGTGCAGCTCCAGGAAGA
TCCCGTCGATTTCCCCTTGACGGCCGAGCTTACCGTGCCAGGCGTCGGCA
CTCTCTCCCAGACATTGACCGGGTGCTCTGTCAAGGGGACCAAGACAAGG
AAGGTCACATGCGTCCCTGGACCCACAGCTGCCCCCACAGCTGCCCCCAC
CGTCTTTTCTGGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATTGGAC
CACATGAGTTTCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGTGATG
TGA back to topprotein sequence of rna8700 >rna8700-protein ID=rna8700-protein|Name=rna8700|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
MTPNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKW
SMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNS
KGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPV
DFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVF
SGPWRKIIETLRIGPHEFRCKSSTWKNLQVM back to topmRNA from alignment at KK037249.1:620510..621371- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8700 ID=rna8700|Name=rna8700|organism=Nannochloropsis gaditana|type=mRNA|length=862bp|location=Sequence derived from alignment at KK037249.1:620510..621371- (Nannochloropsis gaditana)
ATGACTCCGTACGGCTACTGGACGTGTGACAGACAGACTGCCCGTCTTTG
GAGCTTGCCCTTGCTCACTCCGGTACAAGCCGCACAAGCAATGTTCCACA
TCTGATCCTTCTCTTTCGACGCCACAGGAACTTAACCAAGCGTACCATCA
TGCGACGTGGTCTTTCTTTGCTCGCCTTGGGGCTTACCCTTGCGCTTACC
ACCGGACAAATGCTCTCCCTCAAGTCCATCAAGACGTTCGAAAGGACGCA
GATGAACAAAGACAAGTGGAGCATGAAGGCCCACCTGGAGGACCCTACTC
TTGCTGTGGTGTCCGGCATTGGCACAAGTGGTCTGACTGTGACGCTGCTC
GATACGGCGGATGACACCTTGGACACAGCGACCTTCGCGGCGGGCGACTG
CATGGTGCGGAAGAACTCCAAGGGGGCGAGGTGCAAGATGATGGGGGCAC
GCGTGTCAATCAGGGCCAGCAAGCCCCCCAAGGGTGTAGGAAAGTCACAC
AACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGACGTGTGCA
GCTCCAGGAAGATCCCGTCGATTTCCCCTTGACGGCCGAGCTTACCGTGC
CAGGCGTCGGCACTCTCTCCCAGACATTGACCGGTTGCTCTGTCAAGGGG
ACCAAGACAAGGAAGGTCACATGCGTCCCAGGGCCCACAGCTGCCCCCAC
AGCTGCCCCCACCGGTGCGCCAATTTTTGGTTAGGTGCCTTAATGCCTTC
CTTAGCACTAGTCTTTTCTGGTCCTTGGCGTAAAATTATTGAAACTCTCA
GGATTGGACCACATGAGTTTCGATGCAAATCTTCTACTTGGAAGAACTTG
CAGGTGATGTGA back to topCoding sequence (CDS) from alignment at KK037249.1:620510..621371- >rna8700 ID=rna8700|Name=rna8700|organism=Nannochloropsis gaditana|type=CDS|length=2088bp|location=Sequence derived from alignment at KK037249.1:620510..621371- (Nannochloropsis gaditana)
TCTTTTCTGGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATTGGACCA
CATGAGTTTCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGTGATGTG
AGAACTTAACCAAGCGTACCATCATGCGACGTGGTCTTTCTTTGCTCGCC
TTGGGGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCAAGTC
CATCAAGACGTTCGAAAGGACGCAGATGAACAAAGACAAGTGGAGCATGA
AGGCCCACCTGGAGGACCCTACTCTTGCTGTGGTGTCCGGCATTGGCACA
AGTGGTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCTTGGACAC
AGCGACCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAGGGGG
CGAGGTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAAGCCC
CCCAAGGGTGTAGGAAAGTCACACAACTCGACGGGAGGATACTACAGCGT
GTCAGGCAGCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCC
CCTTGACGGCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTCCCAGACA
TTGACCGGTTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACATGCGT
CCCAGGGCCCACAGCTGCCCCCACAGCTGCCCCCACCGATGACTCCTCTT
TTCTGGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATTGGACCACATG
AGTTTCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGTGATGTGAGAA
CTTAACCAAGCGTACCATCATGCGACGTGGTCTTTCTTTGCTCGCCTTGG
GGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCAAGTCCATC
AAGACGTTCGAAAGGACGCAGATGAACAAAGACAAGTGGAGCATGAAGGC
CCACCTGGAGGACCCTACTCTTGCTGTGGTGTCCGGCATTGGCACAAGTG
GTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCTTGGACACAGCG
ACCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAGGGGGCGAG
GTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAAGCCCCCCA
AGGGTGTAGGAAAGTCACACAACTCGACGGGAGGATACTACAGCGTGTCA
GGCAGCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCCCCTT
GACGGCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTCCCAGACATTGA
CCGGTTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACATGCGTCCCA
GGGCCCACAGCTGCCCCCACAGCTGCCCCCACCGATGACTCCTCTTTTCT
GGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATTGGACCACATGAGTT
TCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGTGATGTGAGAACTTA
ACCAAGCGTACCATCATGCGACGTGGTCTTTCTTTGCTCGCCTTGGGGCT
TACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCAAGTCCATCAAGA
CGTTCGAAAGGACGCAGATGAACAAAGACAAGTGGAGCATGAAGGCCCAC
CTGGAGGACCCTACTCTTGCTGTGGTGTCCGGCATTGGCACAAGTGGTCT
GACTGTGACGCTGCTCGATACGGCGGATGACACCTTGGACACAGCGACCT
TCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAGGGGGCGAGGTGC
AAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAAGCCCCCCAAGGG
TGTAGGAAAGTCACACAACTCGACGGGAGGATACTACAGCGTGTCAGGCA
GCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCCCCTTGACG
GCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTCCCAGACATTGACCGG
TTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACATGCGTCCCAGGGC
CCACAGCTGCCCCCACAGCTGCCCCCACCGATGACTCC back to top
|