EWM22004.1, cds8671 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585102400|gb|EWM22004.1| (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana]) HSP 1 Score: 471.085 bits (1211), Expect = 5.374e-168 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query: 1 MTPNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 231
MTPNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM
Sbjct: 1 MTPNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 231
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585102398|gb|EWM22002.1| (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana]) HSP 1 Score: 462.996 bits (1190), Expect = 1.068e-163 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query: 4 NLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 231
NLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM
Sbjct: 73 NLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 300
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|553178588|ref|XP_005852576.1| (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >gi|422295956|gb|EKU23255.1| hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 308.145 bits (788), Expect = 3.296e-104 Identity = 169/176 (96.02%), Postives = 173/176 (98.30%), Query Frame = 0
Query: 11 MRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCV 186
MRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMK HLEDPTLAVVSGIGT+GLTVTLLD A DTLDTA+FAAGDCMVRK+SKGARCKMMGARVSIRASKPPKGVGKSHNSTGGY+SVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCV
Sbjct: 1 MRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCV 176
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585102401|gb|EWM22005.1| (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana]) HSP 1 Score: 296.59 bits (758), Expect = 1.302e-98 Identity = 172/199 (86.43%), Postives = 180/199 (90.45%), Query Frame = 0
Query: 4 NLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVG-KSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPG---PTAAPTAAPT 198
N TK TIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERT+MNKDKWSMK +LEDPTLAVVSGIGTSGLTVTLLDTADDTLDTA+FAAGDCMVRKNSKGA+CKMMGARVSIRASKPPKGV K++NSTGGYYSVSGSFR VQLQEDPV PLTAELTV GVGTLSQTLT CSV+G T + TCVPG PT APTAA T
Sbjct: 61 NFTKLTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSIRASKPPKGVKVKTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVRGAGTTRTTCVPGPIIPTNAPTAAST 259
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585112674|gb|EWM30045.1| (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana]) HSP 1 Score: 177.563 bits (449), Expect = 1.413e-52 Identity = 98/195 (50.26%), Postives = 129/195 (66.15%), Query Frame = 0
Query: 11 MRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGV---GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCS--VKGT-KTRKVTCVPGP---TAAPTAA 196
MRR LSLLALG+TL +T GQ +LK++K ER++ +D+WSMK +L++P + VV IG GLTV LLD + D L + FAA +C + +N +G RCK MGARVSI+ ++ PKG + NSTGGYY SG FRR+Q +DPV PLT ++ V G TL ++ CS KG + K+TC PGP T APTAA
Sbjct: 1 MRRILSLLALGVTLVMTAGQEFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRRPKGAKVKSSNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVV-GSTTLPAIVSTCSERTKGAGRITKITCTPGPAPVTPAPTAA 194
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585112664|gb|EWM30036.1| (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana]) HSP 1 Score: 180.644 bits (457), Expect = 1.075e-51 Identity = 94/190 (49.47%), Postives = 128/190 (67.37%), Query Frame = 0
Query: 9 TIMRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGV---GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGV-GTLSQTLTGCS--VKGT-KTRKVTCVPGPT 190
T MRR LLALG+TL +T GQ + +LK++K ++++ +D+WSMK +L+DPT+ VV IG GLTV L D A TL++ FAA DC +R+N +G CK GARVSI+ S+ PKG ++NSTGGYYS SG FRR+Q +DP+ FPLT L VP + S ++ CS +KG +T ++TC PGPT
Sbjct: 18 TTMRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPT 207
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|553189589|ref|XP_005855033.1| (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >gi|422294031|gb|EKU21331.1| hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 167.548 bits (423), Expect = 9.468e-49 Identity = 81/157 (51.59%), Postives = 109/157 (69.43%), Query Frame = 0
Query: 11 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGV---GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGV 163
MRR LLALG+TL +T GQ + +LK++K ++++ +D+WSMK +L+DPT+ VV IG GLTV L D A TL++ FAA DC +R+N +G CK GARVSI+ S+ PKG ++NSTGGYYS SG FRR+Q +DP+ FPLT L VP +
Sbjct: 1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGANVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSI 157
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585108538|gb|EWM26485.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 162.155 bits (409), Expect = 5.817e-46 Identity = 98/194 (50.52%), Postives = 121/194 (62.37%), Query Frame = 0
Query: 11 MRRGLSLLALGLT----LALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRAS-----KPPKGV-GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVT---CVPGPTA 191
MR LSLL LG+T L T GQ L+LKSI+T +R+ NKD W MK ++ DP+L +V IG +GLTV L D A D L+T FAA DC V + + A CK+ GARVSI+ S K PK V KS+NSTGGYYSV+G+FR + E+PV PLTA L + G LS TLT C K+ + T C PGP A
Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRING-SVLSDTLTSCYDLARKSGRNTISHCEPGPPA 193
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585108537|gb|EWM26484.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 162.155 bits (409), Expect = 1.869e-45 Identity = 98/194 (50.52%), Postives = 121/194 (62.37%), Query Frame = 0
Query: 11 MRRGLSLLALGLT----LALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRAS-----KPPKGV-GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVT---CVPGPTA 191
MR LSLL LG+T L T GQ L+LKSI+T +R+ NKD W MK ++ DP+L +V IG +GLTV L D A D L+T FAA DC V + + A CK+ GARVSI+ S K PK V KS+NSTGGYYSV+G+FR + E+PV PLTA L + G LS TLT C K+ + T C PGP A
Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRING-SVLSDTLTSCYDLARKSGRNTISHCEPGPPA 193
BLAST of EWM22004.1 vs. NCBI_GenBank
Match: gi|585109630|gb|EWM27399.1| (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 161.384 bits (407), Expect = 1.977e-45 Identity = 101/201 (50.25%), Postives = 121/201 (60.20%), Query Frame = 0
Query: 11 MRRGLSLLALGLTLA----LTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPK------GVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVT---CVPGPTAAPTAAPT 198
MR LSLLALG+TL T GQ L+LKSI+ +R+ NKD W MK + DP+L +VS IG GLTV L D A D L+T TFAA DC V + + A CK+ GARVSI+ S+ PK KS+NSTGGYYSV+G+FR + E+PV PLTA LTV LS TLT C K + T C PGP P PT
Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTV-DESVLSDTLTLCYNLPRKNGRNTISHCEPGP---PVPTPT 197 The following BLAST results are available for this feature:
BLAST of EWM22004.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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