EWM22022.1, cds8651 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|585102430|gb|EWM22022.1| (heat shock protein hsp20 [Nannochloropsis gaditana]) HSP 1 Score: 327.405 bits (838), Expect = 1.617e-113 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 Query: 1 MALSRYWRDDPLGSNLIERDPFADFFSTGGGWLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRVS 159 MALSRYWRDDPLGSNLIERDPFADFFSTGGGWLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRVS Sbjct: 1 MALSRYWRDDPLGSNLIERDPFADFFSTGGGWLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRVS 159
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|1176770500|gb|OQY88376.1| (hypothetical protein B6D39_11330 [Anaerolineae bacterium UTCFX2]) HSP 1 Score: 102.834 bits (255), Expect = 6.387e-25 Identity = 50/142 (35.21%), Postives = 89/142 (62.68%), Query Frame = 0 Query: 16 LIERDPFADFFSTGGG---WLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRK 154 L+ DP+ + + + PS S+G + QP+ +L LDV E ++E++V+ PG+ +D ++T+D+NVL + E +E++E ++ R+H+ ERR+GS SRS+ LP + D I A+Y GVL +H+PK++E+ ++ Sbjct: 4 LVRWDPYREMMNLRNAFDRYFDPS----QSSGEAGWQPMTWNLALDVAETDDEYRVSASLPGIDPDDLEITYDSNVLTIKGEMREDQEVKEERYHMRERRYGSFSRSISLPTSVKADKIKADYSKGVLTLHLPKSEEARPKR 141
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|857977738|emb|CEO96287.1| (hypothetical protein PBRA_004958 [Plasmodiophora brassicae]) HSP 1 Score: 101.293 bits (251), Expect = 1.446e-24 Identity = 44/101 (43.56%), Postives = 70/101 (69.31%), Query Frame = 0 Query: 53 PSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETR 153 P LN+++KE ++ + + +DAPG+ KED + F+N VL V+ E KEE + D + H +ER +G SSR++RLP++ D ITA++ +GVL + VPK +S T+ Sbjct: 26 PVLNMELKETDDVYSLVVDAPGVPKEDIKLNFENGVLSVSVEHKEEHVQRDEKVHFTERSYGHSSRAIRLPKSIAADKITAKHANGVLTVTVPKQDQSRTK 126
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|855313877|ref|XP_012898331.1| (uncharacterized protein [Blastocystis hominis] >gi|300176618|emb|CBK24283.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 96.2857 bits (238), Expect = 2.581e-22 Identity = 51/162 (31.48%), Postives = 87/162 (53.70%), Query Frame = 0 Query: 15 NLIERDPFADFFS--TGGGWLTPSVGG-----------ALSTGTSRGQPVVPSLN----LDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRVS 159 + I RDPF D F W P +++TG + V+ + +D++E +++++D PGM+KE+ ++ +NN+L + ERKEEK E + H ER +GS R + LP D I A Y++GVLK+H+PK ++ ++++I V+ Sbjct: 2 SFILRDPFFDGFEDLMANHWPMPLSHSRPMPVEDEKETSMTTGKRLRRDVITPYSGFGRMDMRESEKGYELSVDIPGMEKENIKISTENNILVIEGERKEEKTSEKDKVHFMERHYGSFRREISLPSNVKTDDIVAMYNNGVLKLHIPKAEQHSSKRSITVA 163
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|1084619634|gb|OGO72027.1| (heat-shock protein Hsp20 [Chloroflexi bacterium RBG_19FT_COMBO_56_12]) HSP 1 Score: 96.2857 bits (238), Expect = 2.683e-22 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 0 Query: 49 QPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRK 154 QP L LDV E +EF V PG+ +D ++TF NN L + E KEEK+ E A +H+ ERR+GS +RS+ LP D I A Y+ GVLK+ +PK +E + +K Sbjct: 34 QPAAWDLALDVTESEDEFTVKASLPGINPDDLEITFTNNTLTIKGETKEEKDVEKAHYHLRERRYGSFARSITLPAGIETDKIQANYEVGVLKLRLPKAEEVKPKK 139
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|1125579021|gb|OLE86282.1| (hypothetical protein AUG08_15150 [Acidobacteria bacterium 13_1_20CM_2_55_15]) HSP 1 Score: 94.7449 bits (234), Expect = 5.437e-22 Identity = 61/152 (40.13%), Postives = 87/152 (57.24%), Query Frame = 0 Query: 15 NLIERDPFADFFST-------GGGWLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRVS 159 +LI+ DPF +F + G W P LST T VPS+ D+ E +NE V + PGM D DV +NNVL + ER EK+ ++ +H ER +G+ +RS LPRT NGD ++AEY G+LKI +PK +E++ K I+V+ Sbjct: 2 SLIKWDPFREFNTLPARLAFWGKDWEEP-----LSTTT-----YVPSV--DIFETDNEVVVKAEMPGMNANDIDVRLENNVLTLKGERHFEKDAKEENYHRIEREYGTFTRSFALPRTVNGDKVSAEYRDGILKIVLPKKEETKP-KAIKVA 140
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|499236086|ref|WP_010933626.1| (heat-shock protein Hsp20 [Chlorobaculum tepidum] >gi|21674781|ref|NP_662846.1| HSP20 family protein [Chlorobium tepidum TLS] >gi|21647996|gb|AAM73188.1| heat shock protein, Hsp20 family [Chlorobium tepidum TLS]) HSP 1 Score: 94.7449 bits (234), Expect = 5.496e-22 Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 0 Query: 12 LGSNLIERDPFADFFSTGGGWLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQ-ESETRKTIRVS 159 + L +DP F LTP + +S G + P+ +D+ E ++ D PG+KKED V+ +++V+ ++ ER +E+EE+ +H ER WGS SRS + + D ITA YD+GVLK+ +PK + E + K I VS Sbjct: 1 MALTLYGKDPLKMFEDVFNERLTPFI-------SSMGSMMAPAFKVDISEDEKAIYLSADIPGVKKEDVKVSIEDDVISISAERTQEEEEKKKNYHRVERSWGSLSRSFTIGDNVDSDNITANYDNGVLKVVIPKKEPEQKKSKEIAVS 142
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|506368285|ref|WP_015888004.1| (Hsp20/alpha crystallin family protein [Sinorhizobium fredii] >gi|227820165|ref|YP_002824136.1| HSP16 heat shock protein (plasmid) [Sinorhizobium fredii NGR234] >gi|227339164|gb|ACP23383.1| heat shock protein 16 (plasmid) [Sinorhizobium fredii NGR234]) HSP 1 Score: 95.9005 bits (237), Expect = 6.610e-22 Identity = 46/123 (37.40%), Postives = 76/123 (61.79%), Query Frame = 0 Query: 37 VGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRVS 159 +GG L GT G ++P ++DV E NE ++ + PG+K ED DV+ +++ L + E+K E+++E +H ER +G+ RS+RLP + + D I A++ GVL + +PK E E R+ I+V Sbjct: 42 LGGPLQRGTQEGGMMMP--DIDVSETENEVRICAELPGVKDEDVDVSLNDDTLTIRAEKKFERKDEKENYHFMERSYGTFQRSLRLPYSVDADKIRADFADGVLTVTLPKGPEQEKRRKIQVQ 162
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|1049544425|gb|ANY58115.1| (Amidohydrolase [uncultured bacterium]) HSP 1 Score: 95.1301 bits (235), Expect = 8.543e-22 Identity = 47/136 (34.56%), Postives = 82/136 (60.29%), Query Frame = 0 Query: 20 DPFADFFSTGGGWLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEE-EDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRK 154 DP FF T L G +RG ++ + DV E E +VA + PG+++ED +V +NNVL + E++EE+ E E ++H++ERR+G+ +RS LPR + + I A +++GVL + +PK+++++ R+ Sbjct: 36 DPLDRFFDT-----------VLGAGGARGGSLMRAPETDVVETEREIRVATEMPGLRQEDIEVDVENNVLTIRGEKREERSEGEQGKYHLAERRYGTFARSFVLPRDVDAERIEAAFENGVLTVRIPKSEKTQRRR 160
BLAST of EWM22022.1 vs. NCBI_GenBank
Match: gi|857977739|emb|CEO96288.1| (hypothetical protein PBRA_004959 [Plasmodiophora brassicae]) HSP 1 Score: 93.9745 bits (232), Expect = 9.760e-22 Identity = 40/106 (37.74%), Postives = 70/106 (66.04%), Query Frame = 0 Query: 53 PSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRV 158 P L ++ KE +N + + ++ PG K+D + +N VL V+ ER+EE+ EE H SER +G +SRS+RLP+ N D +TA++++G+L +++PK E+++ I + Sbjct: 30 PVLKMEFKETDNAYALTVETPGSSKDDIKLKIENGVLTVSAERQEERVEEKEHVHFSERTYGQTSRSIRLPKNINADKVTAKHENGLLLVNIPKQDETKSSDYITI 135 The following BLAST results are available for this feature:
BLAST of EWM22022.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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