EWM22025.1, cds8648 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|585102436|gb|EWM22025.1| (retinoblastoma binding protein 9 [Nannochloropsis gaditana]) HSP 1 Score: 468.774 bits (1205), Expect = 2.662e-167 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query: 1 MSRKSTLLPFYIVLLIARRLLAFSSAPKMALSTRRLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQLLADGTASPAHVETSA 227
MSRKSTLLPFYIVLLIARRLLAFSSAPKMALSTRRLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQLLADGTASPAHVETSA
Sbjct: 1 MSRKSTLLPFYIVLLIARRLLAFSSAPKMALSTRRLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQLLADGTASPAHVETSA 227
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|919088378|ref|XP_013381212.1| (PREDICTED: putative hydrolase RBBP9 [Lingula anatina] >gi|919088381|ref|XP_013381213.1| PREDICTED: putative hydrolase RBBP9 [Lingula anatina]) HSP 1 Score: 254.603 bits (649), Expect = 3.500e-83 Identity = 113/175 (64.57%), Postives = 136/175 (77.71%), Query Frame = 0
Query: 35 RLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALR 209
R+VI+PGNG G+V ANWYGW L I LENMPDP TARESVW+PFMK+ LKCD ST+++GHSSGA+AAMR+AE ++V G+++VS CVTDLGD NERASGYYNRPW W +I+ANA FVLQFGS DDPFIPWEEQQ VH+G+ S L Y+ +GH M TFP L A++
Sbjct: 4 RVVIIPGNGAGDVYHANWYGWLHNKLNTKENIP-CALENMPDPVTARESVWIPFMKETLKCDESTIIVGHSSGAQAAMRYAEKYKVLGIIVVSGCVTDLGDENERASGYYNRPWEWEKIRANATFVLQFGSTDDPFIPWEEQQQVHQGLQSKLHKYEDKGHCMNSTFPDLLNAVK 177
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|762167269|ref|XP_011421961.1| (PREDICTED: putative hydrolase RBBP9 isoform X2 [Crassostrea gigas]) HSP 1 Score: 254.603 bits (649), Expect = 4.242e-83 Identity = 107/178 (60.11%), Postives = 141/178 (79.21%), Query Frame = 0
Query: 35 RLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQL 212
++ I+PGNG G+V ANWYGWA + + + + L NMPDP TA+ES+W+PFM+++++CD +TV+IGHSSGAEAAMRFAE ++V G++LVSACVTDLGD NERASGYY+RPW WT IKAN FV+QFGS DDPFIPWEEQQAV +G+ S L + +GHFM +FP+L E ++ ++
Sbjct: 14 KVAIIPGNGAGDVFHANWYGWAHKQINKMENVS-CDLRNMPDPITAKESIWIPFMREQMECDENTVIIGHSSGAEAAMRFAEKYKVKGIILVSACVTDLGDDNERASGYYSRPWDWTSIKANTDFVVQFGSTDDPFIPWEEQQAVADGLSSDLRKFSDKGHFMNSSFPQLMEVVKEKI 190
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|762167271|ref|XP_011421963.1| (PREDICTED: putative hydrolase RBBP9 isoform X3 [Crassostrea gigas] >gi|405945175|gb|EKC17187.1| Putative hydrolase RBBP9 [Crassostrea gigas]) HSP 1 Score: 253.832 bits (647), Expect = 5.762e-83 Identity = 107/178 (60.11%), Postives = 141/178 (79.21%), Query Frame = 0
Query: 35 RLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQL 212
++ I+PGNG G+V ANWYGWA + + + + L NMPDP TA+ES+W+PFM+++++CD +TV+IGHSSGAEAAMRFAE ++V G++LVSACVTDLGD NERASGYY+RPW WT IKAN FV+QFGS DDPFIPWEEQQAV +G+ S L + +GHFM +FP+L E ++ ++
Sbjct: 2 KVAIIPGNGAGDVFHANWYGWAHKQINKMENVS-CDLRNMPDPITAKESIWIPFMREQMECDENTVIIGHSSGAEAAMRFAEKYKVKGIILVSACVTDLGDDNERASGYYSRPWDWTSIKANTDFVVQFGSTDDPFIPWEEQQAVADGLSSDLRKFSDKGHFMNSSFPQLMEVVKEKI 178
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|1139854278|ref|XP_011421960.2| (PREDICTED: putative hydrolase RBBP9 isoform X1 [Crassostrea gigas]) HSP 1 Score: 254.218 bits (648), Expect = 9.298e-83 Identity = 107/178 (60.11%), Postives = 141/178 (79.21%), Query Frame = 0
Query: 35 RLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQL 212
++ I+PGNG G+V ANWYGWA + + + + L NMPDP TA+ES+W+PFM+++++CD +TV+IGHSSGAEAAMRFAE ++V G++LVSACVTDLGD NERASGYY+RPW WT IKAN FV+QFGS DDPFIPWEEQQAV +G+ S L + +GHFM +FP+L E ++ ++
Sbjct: 24 KVAIIPGNGAGDVFHANWYGWAHKQINKMENVS-CDLRNMPDPITAKESIWIPFMREQMECDENTVIIGHSSGAEAAMRFAEKYKVKGIILVSACVTDLGDDNERASGYYSRPWDWTSIKANTDFVVQFGSTDDPFIPWEEQQAVADGLSSDLRKFSDKGHFMNSSFPQLMEVVKEKI 200
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|524912460|ref|XP_005111078.1| (PREDICTED: putative hydrolase RBBP9 isoform X1 [Aplysia californica]) HSP 1 Score: 248.825 bits (634), Expect = 3.340e-80 Identity = 123/202 (60.89%), Postives = 144/202 (71.29%), Query Frame = 0
Query: 12 IVLLIARR-LLAFSS----APKMALSTRRLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREAL 208
+ LL ARR LA ++ P + + R VIVPGNG G+V RANWYGW R L D G+E LENMPDP TARESVWLPFM+ L+CD +TV++GHSSGAEAAMR+AESH+V +VLVSACVTDLGD NE ASGYYNRPW W IK N + QFGS DD FIPW EQQ V EG+ S LF + +GHFM FP+L + L
Sbjct: 22 LALLSARRPRLAANTITRVVPMASCNKVRFVIVPGNGAGDVHRANWYGWLFRKLCD-AGME-CCLENMPDPITARESVWLPFMEKELRCDENTVIVGHSSGAEAAMRYAESHKVYSIVLVSACVTDLGDPNEAASGYYNRPWDWESIKGNVKVIAQFGSTDDSFIPWSEQQQVVEGLSSKLFEFSDKGHFMNSQFPQLLKYL 221
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|524912462|ref|XP_005111079.1| (PREDICTED: putative hydrolase RBBP9 isoform X2 [Aplysia californica] >gi|524912464|ref|XP_005111080.1| PREDICTED: putative hydrolase RBBP9 isoform X2 [Aplysia californica] >gi|524912466|ref|XP_005111081.1| PREDICTED: putative hydrolase RBBP9 isoform X2 [Aplysia californica] >gi|871270850|ref|XP_012945027.1| PREDICTED: putative hydrolase RBBP9 isoform X2 [Aplysia californica]) HSP 1 Score: 247.284 bits (630), Expect = 3.649e-80 Identity = 115/174 (66.09%), Postives = 131/174 (75.29%), Query Frame = 0
Query: 35 RLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREAL 208
R VIVPGNG G+V RANWYGW R L D G+E LENMPDP TARESVWLPFM+ L+CD +TV++GHSSGAEAAMR+AESH+V +VLVSACVTDLGD NE ASGYYNRPW W IK N + QFGS DD FIPW EQQ V EG+ S LF + +GHFM FP+L + L
Sbjct: 8 RFVIVPGNGAGDVHRANWYGWLFRKLCD-AGME-CCLENMPDPITARESVWLPFMEKELRCDENTVIVGHSSGAEAAMRYAESHKVYSIVLVSACVTDLGDPNEAASGYYNRPWDWESIKGNVKVIAQFGSTDDSFIPWSEQQQVVEGLSSKLFEFSDKGHFMNSQFPQLLKYL 179
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|1207945330|ref|XP_021362478.1| (putative hydrolase RBBP9 [Mizuhopecten yessoensis] >gi|1207945332|ref|XP_021362479.1| putative hydrolase RBBP9 [Mizuhopecten yessoensis]) HSP 1 Score: 244.973 bits (624), Expect = 2.016e-79 Identity = 104/179 (58.10%), Postives = 133/179 (74.30%), Query Frame = 0
Query: 35 RLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQLL 213
++ I+PGNG G+V ANWYGWA + D+PG+ L NMPDP TARES+W+PFM+ + CD ST++IGHSSGAEAAMRFAE ++V G++LVSAC+TDLGD NER SGYY+RPW W +IKAN F++QFGS DDPFI WEE Q V +G+ S L + GHFM FP L ++++L
Sbjct: 2 KVAIIPGNGAGDVFSANWYGWAYEKINDIPGVT-ADLRNMPDPITARESIWIPFMRGEMSCDESTIIIGHSSGAEAAMRFAEKYKVKGIILVSACITDLGDENERESGYYSRPWEWEKIKANTEFIVQFGSTDDPFIQWEEHQQVADGLQSALHKFSDRGHFMNSVFPELINVVKSKLC 179
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|1205896353|gb|OWF46054.1| (hydrolase RBBP9 [Mizuhopecten yessoensis]) HSP 1 Score: 246.514 bits (628), Expect = 4.792e-79 Identity = 104/179 (58.10%), Postives = 133/179 (74.30%), Query Frame = 0
Query: 35 RLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQLL 213
++ I+PGNG G+V ANWYGWA + D+PG+ L NMPDP TARES+W+PFM+ + CD ST++IGHSSGAEAAMRFAE ++V G++LVSAC+TDLGD NER SGYY+RPW W +IKAN F++QFGS DDPFI WEE Q V +G+ S L + GHFM FP L ++++L
Sbjct: 74 KVAIIPGNGAGDVFSANWYGWAYEKINDIPGVT-ADLRNMPDPITARESIWIPFMRGEMSCDESTIIIGHSSGAEAAMRFAEKYKVKGIILVSACITDLGDENERESGYYSRPWEWEKIKANTEFIVQFGSTDDPFIQWEEHQQVADGLQSALHKFSDRGHFMNSVFPELINVVKSKLC 251
BLAST of EWM22025.1 vs. NCBI_GenBank
Match: gi|260822459|ref|XP_002606619.1| (hypothetical protein BRAFLDRAFT_277797 [Branchiostoma floridae] >gi|229291963|gb|EEN62629.1| hypothetical protein BRAFLDRAFT_277797 [Branchiostoma floridae]) HSP 1 Score: 242.276 bits (617), Expect = 2.532e-78 Identity = 106/184 (57.61%), Postives = 139/184 (75.54%), Query Frame = 0
Query: 29 MALSTRRLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQL 212
MA R VIVPGNG G+V +NWY W + L D+P + L+NMPDP ARE++W+PFM++ L+CD T+VIGHSSGAEAA+R+AE ++V G+VLVSACVTDLGD NERASGYY+RPW+W ++KAN +V+QFGS DDPFIPWEEQQ V +G+ + L + + GHFM+ FP L E ++ +
Sbjct: 1 MAARAERAVIVPGNGAGDVYNSNWYDWVKSNLDDIPNFQ-CTLKNMPDPVMARENIWIPFMREELQCDERTIVIGHSSGAEAAIRYAEQYQVFGIVLVSACVTDLGDENERASGYYSRPWQWDKVKANTRWVVQFGSRDDPFIPWEEQQQVAQGLSTELHKFANRGHFMSYDFPELVEVVKTHV 183 The following BLAST results are available for this feature:
BLAST of EWM22025.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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