EWM22092.1, cds8598 (CDS) Nannochloropsis gaditana

Overview
NameEWM22092.1
Unique Namecds8598
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:454597..454813 -
Alignment locationKK037249.1:453371..454425 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22092.1
Productmethionyl-trna formyltransferase
Orig transcript idgnl|cribi|Naga_100039g4.4430.mrna
GeneFMT
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:454597..454813 -
KK037249.1supercontigKK037249.1:453371..454425 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006464cellular protein modification process
GO:0071951conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003824catalytic activity
GO:0004479methionyl-tRNA formyltransferase activity
GO:0016742hydroxymethyl-, formyl- and related transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011034Formyl_transferase_C-like
IPR015518Met_tRNA_Form_TA-like
IPR005794Fmt
IPR002376Formyl_transf_N
IPR005793Formyl_trans_C
Homology
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|585102509|gb|EWM22092.1| (methionyl-trna formyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query:    1 MSLGRQRVGARSVVAATSAPAYLLKVMLPFILFSTSKAFYTPIALAGRRLGAVQEVIGRNAGPAFRRLGGLRASSKSAGTKRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRWRPQDAKEGAAAA 423
            MSLGRQRVGARSVVAATSAPAYLLKVMLPFILFSTSKAFYTPIALAGRRLGAVQEVIGRNAGPAFRRLGGLRASSKSAGTKRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRWRPQDAKEGAAAA
Sbjct:    1 MSLGRQRVGARSVVAATSAPAYLLKVMLPFILFSTSKAFYTPIALAGRRLGAVQEVIGRNAGPAFRRLGGLRASSKSAGTKRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRWRPQDAKEGAAAA 423          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|299472047|emb|CBN80130.1| (methionyl-tRNA formyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 347.051 bits (889), Expect = 1.335e-112
Identity = 186/343 (54.23%), Postives = 232/343 (67.64%), Query Frame = 0
Query:   81 KRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEG------------EEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRW 411
            K+VVFLGTP++AA +L  LL AS+ G+GGGF++V  V+ PPA +GRK  L PS VQ LA+SE + V+ P  A+D  FL+ LE L PDLCITAAYG FLP +FL IP++GTLN+HPSLLP YRGASPVQR L+AGD  TGV+V FT LKMDAGP++ Q    L G EKAPELLQ LF  GT+ L+E LP VWD T     Q +  A +A KI  +EA+ CF+  SA  +HNKVRAFAGWPGTWA+F   +EG      +A ++K++TT V +             EE   A R V + G     L + C DGSVL +LE+QP  KKVM  K++ANGLRG  +RW
Sbjct:  103 KKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGITVMTPGTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDTETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIECLPGVWDNTVEKSPQDDAAAVKAAKISVDEARCCFKTTSATTIHNKVRAFAGWPGTWAMFSWGKEGTD---SEARKVKLITTAVADPAAAGDDADGGTIEETAVAERQVVMKG---DALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRW 439          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|873236486|emb|CEL99145.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 341.658 bits (875), Expect = 3.284e-111
Identity = 180/371 (48.52%), Postives = 243/371 (65.50%), Query Frame = 0
Query:   59 RNAGPAFRRLGGLRASSKSAGT----KRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEG---GGKAVRLKIVTTRVGEG-----EEGVG------AGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRW 411
            + AG A  R+  L ++S         ++VVFLGTPDVAAL L R+  A+++    GF+++ VVT PPAP GRK  + PSPVQ  AE   +PV  PDK  D  FL+ +E L+PDLCITAAYG FLP +FL IP YGTLNIHPSLLPKYRGA+PVQR L+AG+AVTGVSV+ T LKMDAGP+L Q+ YPL G+E  P+LL TLF  GT+ALL+ LPSVW   A    Q E  A++A K+ A+E ++ F RE+A   HNK+RAF+GWPG W+ F +    + +      + +++K++++R+  G      +G        A R++ + G     L++ C DGS L I ++QP  +K M  K++ NGLRGR +RW
Sbjct:   36 KAAGTARSRVSSLASASTEGAEGVVRRKVVFLGTPDVAALCLQRIHKAAQED-SSGFDLMGVVTNPPAPVGRKRTVVPSPVQAYAEENGLPVWAPDKPSDEAFLNEMEALSPDLCITAAYGGFLPQRFLDIPEYGTLNIHPSLLPKYRGAAPVQRALEAGEAVTGVSVVRTVLKMDAGPVLKQIEYPLTGDETCPQLLHTLFELGTDALLDLLPSVWRREAPAQPQDESLATKARKLTADEGELRFNRETAASAHNKIRAFSGWPGCWSEFTLTSGSDDDAPPQDTETLKMKLLSSRLLRGGPSSASDGNASSAPPSADRLIDLQG---DALKIVCFDGSELGITQLQPQSRKAMGAKAFWNGLRGRLVRW 402          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|551544087|ref|XP_005760159.1| (hypothetical protein EMIHUDRAFT_68433 [Emiliania huxleyi CCMP1516] >gi|485608431|gb|EOD07730.1| hypothetical protein EMIHUDRAFT_68433 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 341.658 bits (875), Expect = 7.470e-111
Identity = 187/356 (52.53%), Postives = 238/356 (66.85%), Query Frame = 0
Query:   75 SKSAGTKRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEA------LLEALPSVWDGTA--RLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVG-----------AGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRW 411
            + SA  +RVVFLGTP VAA +L  LL AS  G GGGFE+ +VV+QPPA SGRK+KLT SPVQTLAE+  + +L P  AK+  FL+ L+ L PDLCITAAYG FLP +FL IPR+GTLN+HPSLLP YRGA+P+QR L+AGDAV GVSV FT LKMDAGPLL Q   PL G+E+ P LL  LF  GTE       LL+ALPSVWDG+   +L  Q++ +A++A K+   +A++  E+ SA   HNKVRAFAGWPGTW    +       GG + +R+K++ TR+G                   GR V +  G  G LR+ CGDGS+L++L +  PGKK +D +++ NGL GR   W
Sbjct:   31 TMSAAKRRVVFLGTPAVAARSLELLLDASAQGGGGGFEVAAVVSQPPARSGRKMKLTASPVQTLAEARGIELLTPASAKEEAFLARLDELQPDLCITAAYGCFLPQRFLDIPRFGTLNVHPSLLPLYRGAAPLQRCLEAGDAVAGVSVAFTVLKMDAGPLLRQEERPLVGDEQEPPLLLELFERGTEPLEAEDLLLDALPSVWDGSCAGQLAPQEDARATKAAKLSTADAELRLEQLSASEAHNKVRAFAGWPGTWTRISI-------GGAEPIRVKLLQTRLGAAARSRHLSPPLQSSSRPTGRQVALAAG-GGALRLVCGDGSLLEVLRLTLPGKKPVDARAFWNGLNGRRAEW 378          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|546313242|ref|XP_005715223.1| (unnamed protein product [Chondrus crispus] >gi|507111691|emb|CDF35404.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 330.102 bits (845), Expect = 5.358e-107
Identity = 182/340 (53.53%), Postives = 228/340 (67.06%), Query Frame = 0
Query:   73 ASSKSAGTKRVVFLGTPDVAALTLSRL-LAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVP-VLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEV-AEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTL 409
             S+ S   KRVVFLGTP VAA  L  + +AA K      F I+ VVTQPPA  GRK  LT SPV TLAE   +  ++ P  AKDP FL  L +LAPDLCITAAYGNFLP  FL IP +GTLNIHPSLLP++RGA+PV R L+AG   TGVS+L T LKMDAGP+LAQ    L+G+E+ PELL+ LF +G EALL+ LPSVWDGTA+ + Q  + A+ A K+  +EA++ F  E+A  +HNKVR FAGWPGTW  F +   +GE++     VRLK++ T V   E G+  G            L V C DGS + +L+VQPPGKK MD +S+ NGLRG+++
Sbjct:   40 CSTTSNDKKRVVFLGTPPVAARALKTINIAALKPD--SSFSIIGVVTQPPALVGRKRVLTNSPVHTLAEELSISTIMTPASAKDPGFLDQLRSLAPDLCITAAYGNFLPKAFLDIPPFGTLNIHPSLLPEFRGAAPVPRALEAGVQTTGVSILLTILKMDAGPVLAQRIRELKGDEQGPELLEELFASGCEALLDVLPSVWDGTAQHIAQDHDAATHAAKLSKDEARLSFT-ENACIIHNKVRGFAGWPGTWGDFVLRGTDGERQ----EVRLKVLETVVLRQEGGMCLGVHDVSFDEDNNCLAVTCDDGSKIGVLQVQPPGKKGMDARSFWNGLRGKSV 372          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|971509447|dbj|GAQ88770.1| (methionyl-tRNA formyltransferase [Klebsormidium nitens])

HSP 1 Score: 323.553 bits (828), Expect = 3.984e-103
Identity = 184/335 (54.93%), Postives = 229/335 (68.36%), Query Frame = 0
Query:   81 KRVVFLGTPDVAALTLSRLLA-ASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVP---VLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTA--RLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTL 409
            +RVVFLGTP+VAA  L RLL  A+K+     FEI +VV+QP A  GR  KL PS V  LA    +P   +LCPD A++  FL  L  LAPDLC+TAAYGN LP+KFLAIPR GTLNIHPSLLP YRGASPVQR ++AG+ VTGV+V FT   MDAGP+LAQ    +    KAPELL+ LF  GT+ LL  LPSV+DGTA  R  EQ   + ++A K+R EE  + FE+ +++ +HNKVRAFAGWPGT A F +  +G +E   + V +K++TTRV EGE   G  + V +    K GLRV C DGS+L+I E+QPP KK M  + + NGLRGR L
Sbjct:  140 RRVVFLGTPEVAAGVLRRLLEEAAKEN--SLFEITAVVSQPAAKQGRGRKLLPSSVSALALESGLPEDRLLCPDTAREEAFLERLSDLAPDLCVTAAYGNILPNKFLAIPRCGTLNIHPSLLPLYRGASPVQRAIEAGEKVTGVTVAFTVRAMDAGPVLAQEEVEVDPNIKAPELLEYLFRRGTDLLLRNLPSVFDGTAAERATEQDHAKKTEAPKVRIEEGNLDFEQPASV-LHNKVRAFAGWPGTKATFYIRSDGSEE--SEPVTVKVITTRVVEGEGAEGDSKEVTL---SKTGLRVTCVDGSILEIQELQPPSKKPMRGRDFWNGLRGRRL 466          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|145356701|ref|XP_001422565.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582808|gb|ABP00882.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 319.316 bits (817), Expect = 1.139e-102
Identity = 181/338 (53.55%), Postives = 226/338 (66.86%), Query Frame = 0
Query:   81 KRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLK---LTPSPVQTLAESEKVP---VLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVW--DGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRV-GEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTL 409
            +RVVFLGTP+ A   L+R+L A+ +GR   FE+ +VV+QP  P GR  K     PSPV  LA    +    VLCP+KA +  FL AL  L  DL +TAAYGNFLP KFL IP+ GTLNIHPSLLP++RGA+PVQR L++G + TGVSV +T LKMDAGP+L QV  PL+G+EKAP+LL  LF  G  ALLE LPSV+  D  AR V Q EE  S A K+  EE ++ F ++SAL  HNKVRAFAGWPGT A  ++   G++E   K V LKI+TTRV  EG+E    G+V       K  LRV C  G  L++LEVQPPGKK M   ++ NG++G T+
Sbjct:   54 RRVVFLGTPECAKEVLARVLDAA-EGRESAFEVAAVVSQPGRPRGRGRKSDEAAPSPVAELALRRGMAEDRVLCPEKANEEWFLDALRALDVDLAVTAAYGNFLPQKFLDIPKLGTLNIHPSLLPQWRGAAPVQRALESGQSETGVSVAYTVLKMDAGPVLRQVTRPLKGDEKAPDLLTELFETGVGALLEELPSVFAGDAAARAVPQSEETLSHAAKVSPEEGELDFTKQSALECHNKVRAFAGWPGTKATLKIKANGDEE--SKEVVLKIITTRVSAEGDEKAANGQVEVT----KKLLRVPCAGGGWLEVLEVQPPGKKAMPANAFINGIKGSTV 384          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|1199290896|gb|OUS45991.1| (Fmt protein [Ostreococcus tauri])

HSP 1 Score: 311.997 bits (798), Expect = 3.459e-100
Identity = 178/345 (51.59%), Postives = 225/345 (65.22%), Query Frame = 0
Query:   70 GLRASSKSAGTKRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLT---PSPVQTLAESEKVP---VLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDG--TARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRG 406
            G   ++ + G  R+VFLGTP+ A+  L ++L A+ +     FE+ +VV+QP  P GR  K     PSPV  LA    +    VLCP+KA +  FL AL  L  D+ +TAAYGNFLP KFL IP++GTLNIHPSLLP++RGA+PVQR L++G + TGVSV +T LKMDAGP+L Q+  PL+G+EKAPELL  LF  G  ALLE LPSV+ G   AR V Q E   S A K+  EE ++ F ++SA+  HNKVRAFAGWPGT A  +V   GE+E   K V LKI TTRV E  +   A   V V    K  LRV CG G  L++LEVQPPGKKVM   ++ NG++G
Sbjct:   15 GSATTNATPGKSRLVFLGTPECASEVLGKVLDAA-EAESATFEVCAVVSQPGRPRGRGRKSDVPPPSPVAELALKRGMAEDRVLCPEKANEEWFLDALRALDVDVMVTAAYGNFLPQKFLDIPKFGTLNIHPSLLPQWRGAAPVQRALESGQSETGVSVAYTVLKMDAGPVLRQITRPLKGDEKAPELLTELFETGVNALLEELPSVFAGEAAARAVPQDEATLSHAAKVSPEEGELNFAKQSAIECHNKVRAFAGWPGTKATLKVKANGEEE--AKEVVLKIATTRVSEEGDAKAANGEVEV---SKKVLRVPCGGGGWLELLEVQPPGKKVMPAGAFINGIKG 353          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|308809335|ref|XP_003081977.1| (Fmt protein (ISS) [Ostreococcus tauri] >gi|693497154|emb|CEG02111.1| Formyl transferase, N-terminal [Ostreococcus tauri])

HSP 1 Score: 311.997 bits (798), Expect = 8.022e-100
Identity = 177/341 (51.91%), Postives = 224/341 (65.69%), Query Frame = 0
Query:   74 SSKSAGTKRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLT---PSPVQTLAESEKVP---VLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDG--TARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRG 406
            ++ + G  R+VFLGTP+ A+  L ++L A+ +     FE+ +VV+QP  P GR  K     PSPV  LA    +    VLCP+KA +  FL AL  L  D+ +TAAYGNFLP KFL IP++GTLNIHPSLLP++RGA+PVQR L++G + TGVSV +T LKMDAGP+L Q+  PL+G+EKAPELL  LF  G  ALLE LPSV+ G   AR V Q E   S A K+  EE ++ F ++SA+  HNKVRAFAGWPGT A  +V   GE+E   K V LKI TTRV E  +   A   V V    K  LRV CG G  L++LEVQPPGKKVM   ++ NG++G
Sbjct:   46 TNATPGKSRLVFLGTPECASEVLGKVLDAA-EAESATFEVCAVVSQPGRPRGRGRKSDVPPPSPVAELALKRGMAEDRVLCPEKANEEWFLDALRALDVDVMVTAAYGNFLPQKFLDIPKFGTLNIHPSLLPQWRGAAPVQRALESGQSETGVSVAYTVLKMDAGPVLRQITRPLKGDEKAPELLTELFETGVNALLEELPSVFAGEAAARAVPQDEATLSHAAKVSPEEGELNFAKQSAIECHNKVRAFAGWPGTKATLKVKANGEEE--AKEVVLKIATTRVSEEGDAKAANGEVEV---SKKVLRVPCGGGGWLELLEVQPPGKKVMPTGAFINGIKG 380          
BLAST of EWM22092.1 vs. NCBI_GenBank
Match: gi|552826240|ref|XP_005846977.1| (hypothetical protein CHLNCDRAFT_48904 [Chlorella variabilis] >gi|307106630|gb|EFN54875.1| hypothetical protein CHLNCDRAFT_48904 [Chlorella variabilis])

HSP 1 Score: 309.301 bits (791), Expect = 2.121e-99
Identity = 171/335 (51.04%), Postives = 223/335 (66.57%), Query Frame = 0
Query:   86 LGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTP--SPVQTLAESEKVP---VLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQ--ASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRVGEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRWRP 413
            + TP VAAL L RLLAA+       FE+ +VVTQPP P+GR  +  P  SPVQ LAE   +P   +L P++  D  FL+AL  LAPDLC+TAAYGN+LPS FLA+P +GTLNIHPSLLP+YRGA+PVQR+LQ G  +TGV+VL+T   MDAGP+LAQ   P+  + +APELL  LF  GT+ L++ L +VW G  +L  Q +++  A+ A K++  EA + F  + A   HNKVR FAGWPGT+A F+   +    G    V LKIV TRV +  E  G+      +G  +  L +RCGDGSVL +LE+Q PGK+VM  K + NGL+GRTL W+P
Sbjct:    1 MSTPQVAALVLKRLLAAAAQP-DASFEVAAVVTQPPRPTGRGNRKVPQPSPVQVLAEEAGLPAGAILAPERPGDAEFLAALRQLAPDLCVTAAYGNYLPSSFLAVPPHGTLNIHPSLLPRYRGAAPVQRSLQDGVPITGVTVLYTVRAMDAGPILAQQKMPVDPDIQAPELLNRLFELGTDLLVDNLEAVWAGMGQLAAQPQDEAAATHAAKLQRHEAVLDFS-QPAQACHNKVRGFAGWPGTFATFQ-QRDAGGGGDAGHVELKIVRTRVAQPSEWSGSSEREVAVG--RDALFIRCGDGSVLQVLELQAPGKRVMAAKDFVNGLKGRTLVWQP 330          
The following BLAST results are available for this feature:
BLAST of EWM22092.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102509|gb|EWM22092.1|0.000e+0100.00methionyl-trna formyltransferase [Nannochloropsis ... [more]
gi|299472047|emb|CBN80130.1|1.335e-11254.23methionyl-tRNA formyltransferase [Ectocarpus silic... [more]
gi|873236486|emb|CEL99145.1|3.284e-11148.52unnamed protein product [Vitrella brassicaformis C... [more]
gi|551544087|ref|XP_005760159.1|7.470e-11152.53hypothetical protein EMIHUDRAFT_68433 [Emiliania h... [more]
gi|546313242|ref|XP_005715223.1|5.358e-10753.53unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|971509447|dbj|GAQ88770.1|3.984e-10354.93methionyl-tRNA formyltransferase [Klebsormidium ni... [more]
gi|145356701|ref|XP_001422565.1|1.139e-10253.55predicted protein [Ostreococcus lucimarinus CCE990... [more]
gi|1199290896|gb|OUS45991.1|3.459e-10051.59Fmt protein [Ostreococcus tauri][more]
gi|308809335|ref|XP_003081977.1|8.022e-10051.91Fmt protein (ISS) [Ostreococcus tauri] >gi|6934971... [more]
gi|552826240|ref|XP_005846977.1|2.121e-9951.04hypothetical protein CHLNCDRAFT_48904 [Chlorella v... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8625rna8625Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications