rna8623, rna8623 (mRNA) Nannochloropsis gaditana

Overview
Namerna8623
Unique Namerna8623
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1007
Alignment locationKK037249.1:448223..451552 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100039g6.4432.mrna
Orig protein idgnl|cribi|Naga_100039g6.4432
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:448223..451552 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100039g6gene8358Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22094.1cds8596Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8623rna8623-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8623 ID=rna8623|Name=rna8623|organism=Nannochloropsis gaditana|type=mRNA|length=1007bp
GAACAACCTCCTCCATGCATGCTCCTCCTCATTTACGCCTAACTTCCTCC
ATTGTATTTATCAAACCACAGACATCTCACCAATATCCATGTGGAGAGCA
GCAGGTATTTGGGATAGACGGTGGCCGTTCTTTACCCTTATACCCATCGT
ATTTATCTTCAGCTTTCCCTCACACACCTGTGGTTATCATAGCCCTCAAA
TTTCATTATCACTACGCCGTCATGTCATGCAGCGGCCATGCCATGCCCTG
CAACAGCGTCGTCATGCCTTGCGACATGCCTTGACCGTTTCCTTAGGTGT
ATGTTTGGGGGCGAATTTGACGCCGCGGCCACTACCATCGGCGCGGGCAG
CAGACAGAAGTGGTGGCCGTAAAGGTCTGGTGAACATCCTTCGGATTCGA
GCTTTTATAGTTACTTTGAAGGAGACGCTGAAAGAACTCGTCGATAAAGG
TGCGACAAGCGCACCTGCTGAAGTAAATCAGCAAATTAAGTACCTGGTTC
GCACGGTACGAATGCCAGAATCGATTAACGATGCTGCTATGTTGATAGAG
TCTTCCCGCGACCGAGAGGCGGCCCGAGGTGTCGGTAGATCAGGCTACGA
GTACTTGACGCAAGTGATCGAATTCAGTGGCTTCGAAGATATGAAGCGAG
AGGGCGTCAGCAAATATGCGACTTTATCCAGTCCAGAGCGCATAGAGTTT
GCTTTAAAGTGTCTGACAGCAGCGGAGCAAGAGCTCGAACGATACTTCCG
CTACTTCCCTAGCGCAGTGATCGCCGATGCTCAGGGTATTTATGAATCGT
ACTTTCTTTAAGATTGAGGATAGGACGGAATCAGTTGGGCTTGGATGTTG
GCAATTTGGGAGACAGAAGTGTATCTACGGGATTGTACAGAAAGAGAAAG
TCAAGCATTAAATCACAAGGTTGGCTTCTTGGATGAGACTGCTTTCACAC
TTGTCAGTCTCTGTGTTTATTAATTGTTCTTTTACGTTGTTGCTGAGTCA
AACTGCA
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protein sequence of rna8623

>rna8623-protein ID=rna8623-protein|Name=rna8623|organism=Nannochloropsis gaditana|type=polypeptide|length=230bp
MYDLSYTKTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFLPADDYWWEF
LKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNV
AQTAAGVWDLLPVAYRPEDPASLYTRYVQSGRLPVNFTLVGLFPYKDWKT
STGSAKGDAYMWAIDTFLGHSLQTTGRRSHKNAKHERPLANPTMLGYFVI
TTGPKSRLGVGRRAWREATTFTRSPTTTTS
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mRNA from alignment at KK037249.1:448223..451552-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8623 ID=rna8623|Name=rna8623|organism=Nannochloropsis gaditana|type=mRNA|length=3330bp|location=Sequence derived from alignment at KK037249.1:448223..451552- (Nannochloropsis gaditana)
TTGCGGTGAGTTTTGGACTATAATTCACAGAGCAATAATTTTGCTGGGAA
GTGTGGTAGCATGCCGGGTTCGGACACAGCCATGGAACATTATTTTGGGT
GGGAACGTATGGAAGGCGACAGCTGTGCACCTGGTTCAACAAATCCCCGT
TTTGACATAACCCACATCGGAGTGAGGTTTGACAGCCCGCAACACGTATC
TAACTTTGGCGCCTCCTTGGAGGATGCACAAATGGGTGGATTTACAGCTG
CTGCTCCTTCTATCCGTGTGACCCCTTCTACTTGGGTGTCCCCAACAAAT
AAATAACAACAGTTTCAGCACCGTGTGCGACAAGCTTTACATGTATGACT
TATCCTACACGAAGACGTTGTCTCCTGCTGGTGAATATGAAGAAACCATG
TTGGTTGCAACATTGGCTGGACTTGTTAATCGTAAAGCTCCACGGCTATT
CACTCCATTCTTGCCCGCCGACGACTATTGGTGGGAGTTCTTGAAGAAGC
GAAACTTTCCTCCGTCGATTAATGAGAGAAATTGCCTCGTGCCCTTGCCT
GATCTAGACGCCCTATTGCAAGCCTTTCCTTCCTTTTGGTCGCATGGCGC
CATTCTCTTCGACCCCATGGTGCCAGCCACTAGTAATGTAGCTCAAACTG
CTGCAGGCGTTTGGGATTTGCTGCCCGTTGCCTATCGACCTGAAGACCCG
GCGTCCCTCTACACGCGGTACGTGCAGAGTGGGCGCCTCCCTGTGAATTT
TACATTGGTTGGATTATTTCCCTACAAGGACTGGAAAACTTCTACGGGCA
GCGCGAAAGGCGATGCTTACATGTGGGCGATAGACACCTTTCTCGGCCAC
AGCCTCCAAACTACCGGAAGAAGGAGTCACAAGAACGCAAAGCACGAGAG
ACCCCTAGCGAATCCCACTATGCTGGGGTATTTTGTGATTACTACTGGAC
CCAAGTCCCGACTGGGAGTGGGGCGCAGGGCGTGGCGGGAAGCTACGACC
TTCACACGGTCTCCAACCACGACTACTTCGTAGAAAGCCTTCTTCTTCGA
TTTAAACGTCTGGGCCGACGTAACACCAAACGATGATCCTGAACAGGCGA
TGGGCACGGACCGATTAATACTAGAGGCGATACTGCGGTCCTGCTACGAG
TTGACGGGAGGGGAGAAGATGATAACGGTGGGCGGTTTTACGCCTTGGGT
TTTCAAATATGTTGGTTGGGAGCACCAAGGCGTCGAGACAGAATGGGAGA
CTGTGAAACTGCTCTCCAGGTACAACGCCATGCTCGACGCAGACGCGTGT
TGCGTGGGCGCCATGGCGAATGCCGCCTTCTACCAGCACTACCCTCTACC
CGAGCGCCTGGTCCAGCAACCTGCGCCTGCCCCGGAGACACTGGCACGCA
AAGGCTAGTTGATCCATCCACAAGAAGAACAGATAGCTGAAAGGCAGTCG
TTCTCCTCTTGGGCGTTGTCTGAAAAGATAAGAGTCGCGAATCGAGGTTT
CTATGCCTTCTACGTGGGCGACTTTGACAGCGCGGCGTGGGCTTACCAGC
AGCTGTACCTTTTGTGGGACGACAAGGCTCGAGGGACGGTTCCTTTGGGG
TGGGCATTAAATCCCAATTTATCGATACGTTTCCCGCTCATATTTGACAT
GATGTACGAGGGCCTAACGCCGCAAGACCGGGTGACGACGGGCGACAGCG
GCGGGGGATACCTGAACCCCACCGAGCTTTTTGGACCCCGCTCCAGCGGG
CTACCCGATGGACGCCAGGTGTGGAAGGCGTGGTGCATGCCTCTCTACCA
GAAATTTGGCACGACTTTCACTGGCTTCCTTTTGAACGGCAGTGCGGGGA
ATATGACTCACGAATGCCAGGCATTTTACGCAGAATATCGAATGACGGTC
TCACAAATAATCACCGGCGCAGCCCTGGCTACCCTTCTGTGCCCTCTCTT
GAAGGGAACACCCCTCTTTTCGAAATAAATGATCTCCCTGAAGGCGATGT
CGACGTTGCAGCCCATGCAATGGTGCAACAATACGACCAATTGGGGCAGG
GAAGGCAGTTCATGGTCTTTCGGGGCACCCTGCCGTTCCCTTTCTATTAC
GCTGCTGTCGTTGAGGCGGTCCAAAAGCTGCGGCCCGCTTCGGAAGCCAT
TGATACTTTGACTCTGGCATACTTGGCACGCCTGGTCTTGGGTGGAAACA
ACAATGATCGTGTCACCTACGTTTCTGACACGCTGCCACGGGCGGGTTGC
CATGCCGGTGAGGTCCGCTGGAACGAGACCTTTCTCGTACGCAACAACGG
GTTTAACAACTTAGATGGAAAAGACATTATTTTGCGGGGAGCATTTTCCC
CCTCGCGGGAAGTCACTGGCATGCGTGAAGCCGCTGTCACAGCCAATGAG
GGAGTAGAGATATTCATTCATAGTTCCTTTTTTGAGCTTGCCTGCTGTTG
GAGGTGTATATGAGCTGGAGTACGGCCTAAAGCGTCGCGGGCAAATTAGC
CAGGACTTTACGTCTTTGGGCAATCCCCGATACATTTGCACCGTTGTCAT
TTCGGGAGAGGCGCAAGAAAAGCTTTAATATTTAGTTGTTAGGTTGGTAC
ATACCGGGAGACACAAGGAAATCTTATAATTATGATAAATGGCTTAGATG
ACATGATGCCATGATGATCAAATTTAGGTCCAGCCGAGCCCAGTGACACG
GTCCTGCAGACGACAGACGCTTCCACTTAACGACAGGGCAGGCACATCTG
TCCACAATCCTTTACAACTAGGGCGCAAACATCAGCTTTAACAGTTATTC
GGCAAAAATATTTTGTCGTGTCCCCTCTCCCTGAAGCTTGTCAAAATAAA
TGTCGGCATATTTCCTGCATCTTCCAAATAATGAGCGTTGGTCATTGACC
ACCCATGAGCAGTATCAATGCAAAACCATTCTGACTGAGGCATATTGCTG
CTGTTGTAACTATAGTGCTAAATGGCTAGACTTACAGTGTGTCGTAAAGA
GCTTAGAAAAGGGTTTATATACGTTGTTGATTGCATGCCTTCAAGCGCGT
ACCGCTAGACACTATCACTGCCTTCGTCCTCCTGGTAGCCTGAGGCATTT
AAGTGGACATCGGGTCCTAAGTCACACAGAAACAATCGATGATTCAACCC
TTTAAGTTCGCGGACAAGAACTTCCGACTTGCGCCGCTCTCCCAGGGCAT
GGGTGTGTAGGCGGGGAGGAGACAGAGGAGGTGAAAGTCGACGAAATGCG
ACAGAAGCCGTGTCCCTTCACTATAAGAAGCTCTGTGTTTTTTGTCACAA
ACACCGCCACAAACTTACAAACGGGGCGAG
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Coding sequence (CDS) from alignment at KK037249.1:448223..451552-

>rna8623 ID=rna8623|Name=rna8623|organism=Nannochloropsis gaditana|type=CDS|length=693bp|location=Sequence derived from alignment at KK037249.1:448223..451552- (Nannochloropsis gaditana)
ATGTATGACTTATCCTACACGAAGACGTTGTCTCCTGCTGGTGAATATGA
AGAAACCATGTTGGTTGCAACATTGGCTGGACTTGTTAATCGTAAAGCTC
CACGGCTATTCACTCCATTCTTGCCCGCCGACGACTATTGGTGGGAGTTC
TTGAAGAAGCGAAACTTTCCTCCGTCGATTAATGAGAGAAATTGCCTCGT
GCCCTTGCCTGATCTAGACGCCCTATTGCAAGCCTTTCCTTCCTTTTGGT
CGCATGGCGCCATTCTCTTCGACCCCATGGTGCCAGCCACTAGTAATGTA
GCTCAAACTGCTGCAGGCGTTTGGGATTTGCTGCCCGTTGCCTATCGACC
TGAAGACCCGGCGTCCCTCTACACGCGGTACGTGCAGAGTGGGCGCCTCC
CTGTGAATTTTACATTGGTTGGATTATTTCCCTACAAGGACTGGAAAACT
TCTACGGGCAGCGCGAAAGGCGATGCTTACATGTGGGCGATAGACACCTT
TCTCGGCCACAGCCTCCAAACTACCGGAAGAAGGAGTCACAAGAACGCAA
AGCACGAGAGACCCCTAGCGAATCCCACTATGCTGGGGTATTTTGTGATT
ACTACTGGACCCAAGTCCCGACTGGGAGTGGGGCGCAGGGCGTGGCGGGA
AGCTACGACCTTCACACGGTCTCCAACCACGACTACTTCGTAG
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Synonyms
Publications