EWM22094.1, cds8596 (CDS) Nannochloropsis gaditana

Overview
NameEWM22094.1
Unique Namecds8596
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:450520..451212 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22094.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100039g6.4432.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:450520..451212 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR025832DUF_GxGYxYP
Homology
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|585102511|gb|EWM22094.1| (hypothetical protein Naga_100039g6 [Nannochloropsis gaditana])

HSP 1 Score: 472.626 bits (1215), Expect = 1.319e-168
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
Query:    1 MYDLSYTKTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFLPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSGRLPVNFTLVGLFPYKDWKTSTGSAKGDAYMWAIDTFLGHSLQTTGRRSHKNAKHERPLANPTMLGYFVITTGPKSRLGVGRRAWREATTFTRSPTTTTS 230
            MYDLSYTKTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFLPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSGRLPVNFTLVGLFPYKDWKTSTGSAKGDAYMWAIDTFLGHSLQTTGRRSHKNAKHERPLANPTMLGYFVITTGPKSRLGVGRRAWREATTFTRSPTTTTS
Sbjct:    1 MYDLSYTKTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFLPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSGRLPVNFTLVGLFPYKDWKTSTGSAKGDAYMWAIDTFLGHSLQTTGRRSHKNAKHERPLANPTMLGYFVITTGPKSRLGVGRRAWREATTFTRSPTTTTS 230          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|1000268544|gb|KXK30989.1| (hypothetical protein UZ16_OP3001003050 [Omnitrophica bacterium OLB16])

HSP 1 Score: 115.931 bits (289), Expect = 4.043e-26
Identity = 77/190 (40.53%), Postives = 103/190 (54.21%), Query Frame = 0
Query:   16 YEETMLVATLAGLVNRKAPRLFTPFLPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSG-RLPVNFTLVGLFPYKDW-----KTSTGSAKGDAYMWAIDTFLGHSLQTTGRRSHKNAKHERPLANPTMLGYFV 199
            +E   LV+ L GL NR AP L   ++  DDYW   L++   P    E   +V +P L+ALL+ +   +  G +L+DP VPATSNVA T AGV +LLP+ YR + P SLY R V +G +LPV   LVG F          ++S+GSAK DAY WAI+ +L                 E  L NP  +GY +
Sbjct:    4 HEHLHLVSVLQGLANRAAPNLLVRWMQTDDYWRGKLQQ---PGRFLETAEIVSIPTLEALLERYAGVY-QGVVLWDPSVPATSNVASTVAGVDNLLPIPYR-DTPGSLYRRLVAAGPQLPVRVNLVGKFTGSGMIPDINESSSGSAKNDAYRWAIERYL-----------------ETGLCNPARMGYTI 171          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|514691293|ref|XP_004993220.1| (hypothetical protein PTSG_06330 [Salpingoeca rosetta] >gi|326428750|gb|EGD74320.1| hypothetical protein PTSG_06330 [Salpingoeca rosetta])

HSP 1 Score: 96.2857 bits (238), Expect = 2.550e-19
Identity = 64/173 (36.99%), Postives = 96/173 (55.49%), Query Frame = 0
Query:    1 MYDLSY---TKTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFLPADDYWWEFLKKRNFPPSINERNCLVPLPD-LDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPE-DPASLYTRYVQSGRLPVNFTLVGLFPYKDWKTSTGSAKGDAYMWAIDTFL 168
            +YD S+      + P   Y+ T L+A + G+VNR  P+LF    PAD  W+ F+++  F     +   L  + D LD  +Q F     +G  ++D  VP+TS VA + AG ++LLPVA+ P  DP S Y++ V + ++ V + L G F  +     TGS+K DAYMWAID  +
Sbjct:   77 VYDSSWLLNETAVDPPTYYQTTQLLAAIQGIVNRDQPQLFLNHTPADAAWFPFIQQTWFKDV--QFQTLDTVDDILDKYMQHF-----NGTAIYDTNVPSTSLVAASLAGAYNLLPVAFDPNGDPNSWYSQLVHTRKMRVAYNLTGKFDGR----VTGSSKCDAYMWAIDELI 238          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|1200134047|ref|WP_087567398.1| (hypothetical protein [Paenibacillus sp. MY03] >gi|1199888670|gb|OUS77114.1| hypothetical protein B1748_08135 [Paenibacillus sp. MY03])

HSP 1 Score: 95.9005 bits (237), Expect = 3.144e-19
Identity = 73/204 (35.78%), Postives = 95/204 (46.57%), Query Frame = 0
Query:    2 YDLSYTKTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFLPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSG-RLPVNFTLVGLFPY-----KDWKTSTGSAKGDAYMWAIDTFLGHSLQTTGRRSHKNAKHERPLANPTMLGYFV 199
            Y  S+T   +    Y+     + L G+VNR   RL+  F+   D +W  LK                L D D LL AF   W  G +L+D  VPATSNVA T  GV  LLPV Y P  P S Y+R++    RLPV  +LVGLF            STGSAK DAY+WA + +L                 +    +PT+L Y++
Sbjct:    9 YIHSFTGPENSKLRYDLLKAASALQGVVNRDCCRLYMTFMDETDEYW--LKHYRSADGFLSEEDWHELRDWDELLDAFEP-WLKGVVLWDDEVPATSNVAATICGVEGLLPVRYDPS-PGSFYSRFIAGDRRLPVKRSLVGLFSGTGTIPGSGSPSTGSAKCDAYLWAKENYL-----------------DAGFCDPTLLAYYL 191          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|1098097225|emb|SFL45046.1| (GxGYxY sequence motif-containing protein [Porphyromonadaceae bacterium KH3CP3RA])

HSP 1 Score: 90.5077 bits (223), Expect = 2.913e-17
Identity = 67/191 (35.08%), Postives = 101/191 (52.88%), Query Frame = 0
Query:    1 MYDLSYT------KTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFL-----PADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSG-RLPVN-----------FTLVGLFPYKDWKTSTGSAKGDAYMWAIDTFL 168
            +YDL YT       T      +++   VATL G+VNRK PRLF  ++       D YWW+  K R     ++E++ +V   D+  L++A+     +G +L+D  + +TSNVA   AG+ +L+ V Y   DP SLY+R V +G +L V            FT  G+ P  D + STGS K D Y+W I+ ++
Sbjct:   33 VYDLRYTLSYDLNDTQQVGSLWDDIHAVATLQGIVNRKGPRLFIHYIVTHGIDIDSYWWD--KYREPGRWLHEKDTVV-YQDIIQLIEAYRKD-INGVVLYDSSIASTSNVASAVAGIENLIAVRY-DTDPNSLYSRIVLNGPKLKVIARLIKENGTPLFTGTGIIPGTD-RMSTGSLKNDPYIWFIENYM 217          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|1141168802|ref|WP_076930892.1| (hypothetical protein [Proteiniphilum saccharofermentans] >gi|1135442439|emb|SCD20991.1| hypothetical protein PSM36_2186 [Proteiniphilum saccharofermentans])

HSP 1 Score: 90.5077 bits (223), Expect = 2.980e-17
Identity = 67/191 (35.08%), Postives = 101/191 (52.88%), Query Frame = 0
Query:    1 MYDLSYT------KTLSPAGEYEETMLVATLAGLVNRKAPRLFTPFL-----PADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSG-RLPVN-----------FTLVGLFPYKDWKTSTGSAKGDAYMWAIDTFL 168
            +YDL YT       T      +++   VATL G+VNRK PRLF  ++       D YWW+  K R     ++E++ +V   D+  L++A+     +G +L+D  + +TSNVA   AG+ +L+ V Y   DP SLY+R V +G +L V            FT  G+ P  D + STGS K D Y+W I+ ++
Sbjct:   39 VYDLRYTLSYDLNDTQQVGSLWDDIHAVATLQGIVNRKGPRLFIHYIVTHGIDIDSYWWD--KYREPGRWLHEKDTVV-YQDIIQLIEAYRKD-INGVVLYDSSIASTSNVASAVAGIENLIAVRY-DTDPNSLYSRIVLNGPKLKVIARLIKENGTPLFTGTGIIPGTD-RMSTGSLKNDPYIWFIENYM 223          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|1085758872|emb|SDT14103.1| (GxGYxY sequence motif-containing protein [Actinopolymorpha singaporensis])

HSP 1 Score: 90.1225 bits (222), Expect = 3.512e-17
Identity = 76/198 (38.38%), Postives = 99/198 (50.00%), Query Frame = 0
Query:    2 YDLSYTKTL------SPAGEYEETMLVATLAGLVNRKAPRLFTPFLP--------ADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYV-----QSG--RLPVNFTLV-----GLFPYKD-----WKTSTGSAKGDAYMWAIDTFL 168
            YDL++  TL        A  Y+E   V+TL G+VNR  PRL+  F+          DDYW   L++      +     L  L  L+ L+  F      GA+++DP VPATS+VA T AG  DL+ V Y P  P SLYTRYV       G  RLP    LV      LF  +       + STGSAK DAY+WA++ +L
Sbjct:   41 YDLTHLYTLDLADPEQAARAYDELHFVSTLQGIVNRDHPRLYVHFVDHSEFGTKDIDDYWLAVLRRDG---GLLADRPLRHLGTLEDLVTTFRRSL-RGAVVWDPNVPATSDVASTVAGARDLVAVRYDPS-PDSLYTRYVGIRDAADGPLRLPAVVRLVRDDGSSLFTGRGPIPGTRRESTGSAKCDAYVWAVEHYL 233          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|576323476|gb|ETZ23148.1| (hypothetical protein N824_16950 [Pedobacter sp. V48])

HSP 1 Score: 90.1225 bits (222), Expect = 4.070e-17
Identity = 72/190 (37.89%), Postives = 102/190 (53.68%), Query Frame = 0
Query:    1 MYDLSYT--KTLSPAGE----YEETMLVATLAGLVNRKAPRLFTPF-----LPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSG-RLPVN-----------FTLVGLFPYKDWKTSTGSAKGDAYMWAIDTF 167
            ++DL YT  K LS A E    +++   V+TL G+VNRK+PRL+        +  D YWW   K R     +N R+ +V   D+  L++A+ S    G +++DP V ATSNVA + AG  D++ V Y      SLYTR V  G +LPV            FT  G+ P    + STGSAK DAY+W ++ +
Sbjct:   35 IFDLEYTLSKDLSNADEVKTAWDDVHTVSTLQGIVNRKSPRLYIYMVKNGAIDIDRYWWN--KYRQKGKWLNGRDTVV-YKDVVRLVKAYRSA-IKGVVVYDPNVSATSNVASSVAGQEDVVAVRYDLS-KNSLYTRLVLQGPKLPVKVWLLNRDGSSLFTGAGIIPGTT-RLSTGSAKNDAYLWFMEKY 218          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|1181150724|ref|WP_084498237.1| (hypothetical protein [Pedobacter sp. V48])

HSP 1 Score: 89.3521 bits (220), Expect = 5.817e-17
Identity = 72/190 (37.89%), Postives = 102/190 (53.68%), Query Frame = 0
Query:    1 MYDLSYT--KTLSPAGE----YEETMLVATLAGLVNRKAPRLFTPF-----LPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSG-RLPVN-----------FTLVGLFPYKDWKTSTGSAKGDAYMWAIDTF 167
            ++DL YT  K LS A E    +++   V+TL G+VNRK+PRL+        +  D YWW   K R     +N R+ +V   D+  L++A+ S    G +++DP V ATSNVA + AG  D++ V Y      SLYTR V  G +LPV            FT  G+ P    + STGSAK DAY+W ++ +
Sbjct:   26 IFDLEYTLSKDLSNADEVKTAWDDVHTVSTLQGIVNRKSPRLYIYMVKNGAIDIDRYWWN--KYRQKGKWLNGRDTVV-YKDVVRLVKAYRSA-IKGVVVYDPNVSATSNVASSVAGQEDVVAVRYDLS-KNSLYTRLVLQGPKLPVKVWLLNRDGSSLFTGAGIIPGTT-RLSTGSAKNDAYLWFMEKY 209          
BLAST of EWM22094.1 vs. NCBI_GenBank
Match: gi|1200134030|ref|WP_087567381.1| (hypothetical protein [Paenibacillus sp. MY03] >gi|1199888653|gb|OUS77097.1| hypothetical protein B1748_08045 [Paenibacillus sp. MY03])

HSP 1 Score: 88.1965 bits (217), Expect = 1.890e-16
Identity = 66/182 (36.26%), Postives = 94/182 (51.65%), Query Frame = 0
Query:    8 KTLSPAGEYEETMLVATLAGLVNRKAPRLFTPF----------LPADDYWWEFLKKRNFPPSINERNCLVPLPDLDALLQAFPSFWSHGAILFDPMVPATSNVAQTAAGVWDLLPVAYRPEDPASLYTRYVQSGRL-PVNFTLVGLF------PYKDWKTSTGSAKGDAYMWAIDTFLGHSL 172
            K++S    Y+   L + L GL NR  P+L+  F          L  D++W E L  ++   S  ++  +    +L  LLQ      + G +L+D  VPAT+NVA T AGV +LLP+ Y  ++P S+Y   V    L PV+  LVG+F      P  D + STGSAK DAY+WA   +L   L
Sbjct:   55 KSVSSKLAYDYLKLASALQGLANRDKPQLYFHFESNGIAKQSNLDIDNFWLEQLSGQDKLLSNYDQVAVDDFFELLDLLQDA----ADGVVLWDEDVPATANVASTIAGVENLLPIRYD-DNPGSVYDEVVTQRELWPVSKNLVGMFTGSGTIPGTDGEPSTGSAKNDAYIWAKINYLDAGL 231          
The following BLAST results are available for this feature:
BLAST of EWM22094.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102511|gb|EWM22094.1|1.319e-168100.00hypothetical protein Naga_100039g6 [Nannochloropsi... [more]
gi|1000268544|gb|KXK30989.1|4.043e-2640.53hypothetical protein UZ16_OP3001003050 [Omnitrophi... [more]
gi|514691293|ref|XP_004993220.1|2.550e-1936.99hypothetical protein PTSG_06330 [Salpingoeca roset... [more]
gi|1200134047|ref|WP_087567398.1|3.144e-1935.78hypothetical protein [Paenibacillus sp. MY03] >gi|... [more]
gi|1098097225|emb|SFL45046.1|2.913e-1735.08GxGYxY sequence motif-containing protein [Porphyro... [more]
gi|1141168802|ref|WP_076930892.1|2.980e-1735.08hypothetical protein [Proteiniphilum saccharoferme... [more]
gi|1085758872|emb|SDT14103.1|3.512e-1738.38GxGYxY sequence motif-containing protein [Actinopo... [more]
gi|576323476|gb|ETZ23148.1|4.070e-1737.89hypothetical protein N824_16950 [Pedobacter sp. V4... [more]
gi|1181150724|ref|WP_084498237.1|5.817e-1737.89hypothetical protein [Pedobacter sp. V48][more]
gi|1200134030|ref|WP_087567381.1|1.890e-1636.26hypothetical protein [Paenibacillus sp. MY03] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8623rna8623Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications