EWM22147.1, cds8530 (CDS) Nannochloropsis gaditana

Overview
NameEWM22147.1
Unique Namecds8530
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:265088..265099 -
Alignment locationKK037249.1:263549..264826 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22147.1
Productprotein tssc1
Orig transcript idgnl|cribi|Naga_100064g7.4104.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:265088..265099 -
KK037249.1supercontigKK037249.1:263549..264826 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|585102568|gb|EWM22147.1| (protein tssc1 [Nannochloropsis gaditana])

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:    1 MIAQVMYSGAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFDLGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEEGPEAPDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            MIAQVMYSGAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFDLGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEEGPEAPDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL
Sbjct:    1 MIAQVMYSGAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFDLGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEEGPEAPDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|298708379|emb|CBJ48442.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 231.876 bits (590), Expect = 3.588e-68
Identity = 173/483 (35.82%), Postives = 218/483 (45.13%), Query Frame = 0
Query:    6 MYSGAV-VYGAKNQSRCLAAVK-----------GDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSST-------RRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGG-GGRVRCVLWGPEQETNGK--------VLAVDGEKARL------YALQGSSDAQEMSNFDLGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPE-------------------------EGPEAPDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            M+S A   Y  K  +RC+AA+            G     RF VG   LR+   NEL +L + EE+N+L    A SHP EIW +SPSP D SL  T S          G     +LWRL            P+ D  D P                                ++ G R   +EP+       +P    GG       +LW P    +          V   DG   R       +   GS+   E               AAAWDPH P +VA A    +   D+R  +AT       S    HRF V+D+D+N  KP+C  T GEDRLIKFWD+RR    PVK + GH HWV TVKYN  HDQLL+S  +D +V+LWR+SS+SSAPL EPE                            EA D+RV    +HEESVY++ WSA D ++ ASLSYDG VV+N VP +EKYKILL
Sbjct:    1 MFSSASSTYNLKRPARCIAALAPQEESPEEEQQGGISSSRFVVGTCSLRE--PNELHVLGFHEESNELLCHQALSHPNEIWGVSPSPTDPSLLVTCSNGAKAGQNNGGVGFKVSLWRL------------PTPDPNDDP----------------------------LHEHVMGGERGHPLEPI------GEPLAELGGLKAAATAMLWSPPGGGSTSSRGGAGEFVTLADGLLKRWNLGDGRFEEAGSATVCEGGQGGGATAAGRGAPAAAWDPHRPVEVATAASCSVTCWDLRTMKAT------TSVAEAHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRP-NAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSDCMVHLWRVSSVSSAPLLEPEDDDAGGLDGDAGGDSGGGFGGGSNGSKGEAADIRVRTFDEHEESVYSLAWSASDAWVMASLSYDGLVVLNHVPSTEKYKILL 428          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|970662844|gb|KUG00162.1| (TSSC1 protein [Phytophthora nicotianae])

HSP 1 Score: 204.912 bits (520), Expect = 2.535e-58
Identity = 136/436 (31.19%), Postives = 206/436 (47.25%), Query Frame = 0
Query:    9 GAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKA-RLYALQGSS-DAQEMSNFD---LGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEE---------GPEAPDVRVLAIQDHEESVYAVDW-SACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            GA  +    + R L +V  + +  +FFVG + L     N++ L++  ++ + +     ++HPGE+  ++PSP+D  L  +   +RG     +LW+L     P +  +S  +D   +                                        Q +E L   P    P         +  V W  +   N  +LA   E   R + L G S +AQ+    D   LG   K    A AWDPH   ++A A G  +R  D+R +Q +   E        H      +DFN  KPY   +GG+D  +KFWD+R   + PV  +  H+HWVW+ +Y+P HDQL+LS G+D  + LWR+SSISS+PL E +E         G    D  +  I++HE++VYA  W +  D ++F S+SYDGR+ VN VP +EKYKILL
Sbjct:    5 GACSFSFGTKVRTLESVLAEKDRAQFFVGTSTLNQ--PNQIHLVQVEDDASNVITRQVFNHPGEVLSLAPSPQDPQLLVSCGKQRGQQAEASLWKL-----PDAEANSSEEDGATVA---------------------------------------QDLEQLAVFPAQKLPVSEADACIVIIRVAW--DATANTSILASSHETLLRTWQLDGGSVEAQDKLELDVSMLGGATKKGASALAWDPHHASQLAFALGGSVRTWDLRAKQDSVSIED------AHLSATLSLDFNPNKPYALASGGDDGKLKFWDLRY-ARKPVLAMNAHSHWVWSTRYHPQHDQLVLSGGSDATLALWRVSSISSSPLVELDERDLMDETAGGAAVADTLIRRIEEHEDAVYAARWATGGDAWMFVSVSYDGRLAVNHVPSTEKYKILL 385          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|567954400|gb|ETK80037.1| (hypothetical protein L915_14207 [Phytophthora parasitica] >gi|567983056|gb|ETL33458.1| hypothetical protein L916_14106 [Phytophthora parasitica] >gi|570320702|gb|ETO68650.1| hypothetical protein F444_14575 [Phytophthora parasitica P1976] >gi|570944531|gb|ETP09788.1| hypothetical protein F441_14437 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 204.527 bits (519), Expect = 2.963e-58
Identity = 132/434 (30.41%), Postives = 201/434 (46.31%), Query Frame = 0
Query:    9 GAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFD---LGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEE---------GPEAPDVRVLAIQDHEESVYAVDW-SACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            GA  +    + R L +V  + +  +FFVG + L     N++ L++  ++ + +     ++HPGE+  ++PSP+D  L  +   +RG     +LW+L     P +  +S  +D   +                                        Q +E L   P    P             +     ET  +   +DG         GS +AQ+    D   LG   K    A AWDPH   ++A A G  +R  D+R +Q +   E        H      +DFN  KPY   +GG+D  +KFWD+R   + PV  +  H+HWVW+ +Y+P HDQL+LS G+D  + LWR+SSISS+PL E +E         G    D  +  I++HE++VYA  W +  D ++F S+SYDGR+ VN VP +EKYKILL
Sbjct:    5 GACSFSFGTKVRTLESVLAEKDRAQFFVGTSTLNQ--PNQIHLVQVEDDASNVITRQVFNHPGEVLSLAPSPQDPQLLVSCGKQRGQQAEASLWKL-----PDAEANSSEEDGATVA---------------------------------------QDLEQLAVFPAQKLPVSEVAWDATANTSILASSHETLLRTWQLDG---------GSVEAQDKLELDVSMLGGATKKGASALAWDPHHASQLAFALGGSVRTWDLRAKQDSVSIED------AHLSATLSLDFNPNKPYALASGGDDGKLKFWDLRY-ARKPVLAMNAHSHWVWSTRYHPQHDQLVLSGGSDATLALWRVSSISSSPLVELDERDLMDETAGGAAVADTLIRRIEEHEDAVYAARWATGGDAWMFVSVSYDGRLAVNHVPSTEKYKILL 376          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|961109509|ref|XP_014778381.1| (PREDICTED: protein TSSC1-like [Octopus bimaculoides] >gi|918308911|gb|KOF79984.1| hypothetical protein OCBIM_22028658mg [Octopus bimaculoides])

HSP 1 Score: 204.142 bits (518), Expect = 4.551e-58
Identity = 145/437 (33.18%), Postives = 213/437 (48.74%), Query Frame = 0
Query:   11 VVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSL---CFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQ-GSSDAQEMSNFDLGVEEKGEVQAAAWDPHDPW-KVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAP---LWEPE-----EGPEA-----PDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            V+YG +  +R L A  GD E+ RF VG   LR   +N++  + + +E N + +       GEIW+IS S  D  +   C+        +    LWRL         P++ +    + P ++                           HR +K          +  P+D          G ++C+LW P  E N  +L +      L+ L   S+ A+  S+  +    + ++ AA W+PH    +VA A    IR  D+R  +   + E        H   V+D+DFN  K YCFV+ G+D  +KFWD+R T   P+K L  H+HWVW+V+YN  HDQL+L++ +D+ V L  I S+SS P   L E E     EG E       D  +   ++HE+SVY VDWS  DP++FASLSYDGR+V+N VP +EKYKILL
Sbjct:    7 VIYGLEFPARALTAQVGDTENIRFLVGTQSLR--AENQVHHIHFDDEYNSINKNVFLHQEGEIWYISASTLDKDILATCYNKHVDSKIEVQAALWRL---------PTNLNDSFTEEPSNS---------------------------HRPLK----------LLCPLD------FSEYGEIKCLLWHPTGEEN-TLLGLADNHILLWNLDVASASAKIFSSASIEARGQPKMTAAKWNPHHKCSQVATANDTTIRGWDLRSMKQVYVIEN------AHGQLVRDLDFNPNKQYCFVSCGDDCKVKFWDVRNTN-SPLKILTDHSHWVWSVRYNHFHDQLVLTSSSDSRVILNNIVSLSSEPFGYLVESEDNSDNEGKEVIREKVNDGVIATYEEHEDSVYRVDWSTADPWVFASLSYDGRLVINRVPRTEKYKILL 381          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|570975893|gb|ETP37810.1| (hypothetical protein F442_14401 [Phytophthora parasitica P10297])

HSP 1 Score: 204.142 bits (518), Expect = 4.779e-58
Identity = 132/434 (30.41%), Postives = 201/434 (46.31%), Query Frame = 0
Query:    9 GAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFD---LGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEE---------GPEAPDVRVLAIQDHEESVYAVDW-SACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            GA  +    + R L +V  + +  +FFVG + L     N++ L++  ++ + +     ++HPGE+  ++PSP+D  L  +   +RG     +LW+L     P +  +S  +D   +                                        Q +E L   P    P             +     ET  +   +DG         GS +AQ+    D   LG   K    A AWDPH   ++A A G  +R  D+R +Q +   E        H      +DFN  KPY   +GG+D  +KFWD+R   + PV  +  H+HWVW+ +Y+P HDQL+LS G+D  + LWR+SSISS+PL E +E         G    D  +  I++HE++VYA  W +  D ++F S+SYDGR+ VN VP +EKYKILL
Sbjct:    5 GACSFSFGTKVRTLESVLAEKDRAQFFVGTSTLNQ--PNQIHLVQVEDDASNVITRQVFNHPGEVLSLAPSPQDPQLLVSCGKQRGQQAEASLWKL-----PDAEANSSEEDGATVA---------------------------------------QDLEQLAVFPAQKLPVSEVAWDATADTSILASSHETLLRTWQLDG---------GSVEAQDKLELDVSMLGGATKKGASALAWDPHHASQLAFALGGSVRTWDLRAKQDSVSIED------AHLSATLSLDFNPNKPYALASGGDDGKLKFWDLRY-ARKPVLAMNAHSHWVWSTRYHPQHDQLVLSGGSDATLALWRVSSISSSPLVELDERDLMDETAGGAAVADTLIRRIEEHEDAVYAARWATGGDAWMFVSVSYDGRLAVNHVPSTEKYKILL 376          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|1021063207|emb|SAM00746.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 203.756 bits (517), Expect = 6.643e-58
Identity = 137/442 (31.00%), Postives = 210/442 (47.51%), Query Frame = 0
Query:   10 AVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFDLGVEEKG------------EVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEEGPEAPDVR-----------VLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKIL 428
            + VYG + Q+RCL +VK   +  +F VG  G R+   N + LLEY++ETN +   + + HP E+W ++  P D  L  T+                     HSP SS +K                           G K     QH  I+   + ++E L  L  +   N++          LW  +  +  ++L++D +   L  L GS+ + + S   L ++               ++Q A W+PHD  +V    G+ I   D+R    +G T  ++     H   ++ +D+N  KP+  VTGG+D  + FWD+R   Q P+ R+ GH HW+W+V  N  HDQLLL++ +D LVNL  + S+SSA  +E E   + PD             +     HE+SVYAV+WS  D + FASLSY GR+++N VP  EK+KIL
Sbjct:    7 SCVYGLRQQARCLTSVKASTDISKFLVGTVGTRN---NVICLLEYNDETNGI-SPTLFDHPDEVWDVASCPTDEQLLLTT---------------------HSPASSQTK---------------------------GKKVTLWRQH--IQQDNNGTLEALADL--EQPANRT----------LWNDKDAS--RLLSLDSKWLHLSVLDGSNSSAKTS---LSIDTSAIIHQTNLTTSLQQLQNAVWNPHDSEEVVAVGGQCIAGWDLR----SGSTTFQKDKA--HDSTIRAIDYNTNKPHHLVTGGDDAKVNFWDVRYLDQ-PIARVEGHTHWIWSVALNKFHDQLLLTSSSDTLVNLHNVISVSSASHFEHESDDQNPDASYWKNYKPTDGLICTYDQHEDSVYAVEWSPADTWTFASLSYAGRIIINQVPTGEKFKIL 370          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|301096623|ref|XP_002897408.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107099|gb|EEY65151.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 202.601 bits (514), Expect = 1.552e-57
Identity = 141/436 (32.34%), Postives = 208/436 (47.71%), Query Frame = 0
Query:    9 GAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKA-RLYALQGSS-DAQEMSNFD---LGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEE---------GPEAPDVRVLAIQDHEESVYAVDWSA-CDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            GA  +    + R L  V  + +  +FFVG + L     N++ L++  ++ + +     ++HPGE+  ++PSP+D+ L  T   +RG     +LW+L            P +D       T  HS              G + G             Q +E L   P    P         V  V W    +T+   LA   E   R + L G S +AQ+    D   LG   K    A AWDPH   ++A A G  +R  D+R +Q     E        H      +DFN  KPY   +GG+D  +KFWD+R   + P+  +  H+HWVW+ +Y+P HDQL++S G+D  + LWR+SSISS+PL E +E         G    D  +  I++HE++VYA  W+A  D ++F S+SYDGR+ VN VP +EKYKILL
Sbjct:    5 GACSFSFGTKVRTLEPVLAEKDRAQFFVGTSTLNQ--PNQIHLVQVDDDASNVMTRQVFNHPGEVLSLAPSPQDAQLLVTCGKQRGQQAEASLWKL------------PDED-------TRTHS--------------GEEDGAAVA---------QDLEQLAAFPAQKLP---------VSEVAWDATADTS--TLASSHETLLRTWQLSGGSVEAQDKLELDVSMLGGTTKKGASALAWDPHHASQLAFALGGSVRTWDLRAKQDKVSIED------AHPSATLSLDFNPNKPYALASGGDDGKLKFWDLR-NARKPLLTMNAHSHWVWSTRYHPQHDQLVVSGGSDAALALWRVSSISSSPLVELDERDLMDETAGGAAVADTLIRRIEEHEDAVYAARWAAGGDAWMFVSVSYDGRLAVNHVPSTEKYKILL 378          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|566016989|gb|ETI39900.1| (hypothetical protein F443_14568 [Phytophthora parasitica P1569])

HSP 1 Score: 202.216 bits (513), Expect = 2.090e-57
Identity = 132/434 (30.41%), Postives = 200/434 (46.08%), Query Frame = 0
Query:    9 GAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFD---LGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEE---------GPEAPDVRVLAIQDHEESVYAVDW-SACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
            GA  +    + R L +V  + +  +FFVG + L     N++ L++   + + +     ++HPGE+  ++PSP+D  L  +   +RG     +LW+L     P +  +S  +D   +                                        Q +E L   P    P             +     ET  +   +DG         GS +AQ+    D   LG   K    A AWDPH   ++A A G  +R  D+R +Q +   E        H      +DFN  KPY   +GG+D  +KFWD+R   + PV  +  H+HWVW+ +Y+P HDQL+LS G+D  + LWR+SSISS+PL E +E         G    D  +  I++HE++VYA  W +  D ++F S+SYDGR+ VN VP +EKYKILL
Sbjct:    5 GACSFSFGTKVRTLESVLAEKDRAQFFVGTSTLNQ--PNQIHLVQVEGDASNVITRQVFNHPGEVLSLAPSPQDPQLLVSCGKQRGQQAEASLWKL-----PDAEANSSEEDGATVA---------------------------------------QDLEQLAVFPAQKLPVSEVAWDATADTSILASSHETLLRTWQLDG---------GSVEAQDKLELDVSMLGGATKKGASALAWDPHHASQLAFALGGSVRTWDLRAKQDSVSIED------AHLSATLSLDFNPNKPYALASGGDDGKLKFWDLRY-ARKPVLAMNAHSHWVWSTRYHPQHDQLVLSGGSDATLALWRVSSISSSPLVELDERDLMDETAGGAAVADTLIRRIEEHEDAVYAARWATGGDAWMFVSVSYDGRLAVNHVPSTEKYKILL 376          
BLAST of EWM22147.1 vs. NCBI_GenBank
Match: gi|196008981|ref|XP_002114356.1| (hypothetical protein TRIADDRAFT_27591 [Trichoplax adhaerens] >gi|190583375|gb|EDV23446.1| hypothetical protein TRIADDRAFT_27591 [Trichoplax adhaerens])

HSP 1 Score: 202.216 bits (513), Expect = 2.865e-57
Identity = 144/445 (32.36%), Postives = 219/445 (49.21%), Query Frame = 0
Query:    9 GAVVYGAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHP-GEIWHISPSPRDSSLCFTSSTRRGADPL---CTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQ--GSSDAQEMSNFDLGVEEKGEVQAAAWDPH-DPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEE----------------GPEAPDVRVLAI-QDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
             AV+YG + Q+R L AV GD +H +F VG    ++   N++ L+E+ EE N +  ++ Y HP GE+WHIS  P D  +  T   R          T W++            P+ D  ++P S     P+       FL                      S+ PL+                 +  VLW P  E    +++V  +  +++  Q   S+ A+ ++  DLG +      +AAW+PH +  +VA A    I+  D+R  +     E        H   V+D+DFN  KPY  V+ G+D  +KFWD+R + + P+ +L  H+HWVW+V YN  HDQL+LS+ +D+ V L+ I S+SS P  + E+                  E P   ++A  ++HE+SVYA  WS  DP++FASLSYDGR+V+N VP +EK+KILL
Sbjct:    5 SAVIYGLEFQARALCAVVGDIDHIQFLVGTQSFKN--DNQVHLIEFDEENNVIN-SNVYLHPIGEVWHISSCPLDKEILLTCYDRLNGSKTNRHATAWKI------------PTDD--EVPTS-----PSIIMHYKCFLI--------------------TSITPLLR---------------SLDSVLWHP-NEDKSTLMSVHDQHLQIWDFQVATSASAKVLNVIDLGEKSHLSFSSAAWNPHHNGTQVAGAYDTNIKAWDLRAMKPAYTIEN------AHGILVRDLDFNPNKPYYVVSCGDDCQVKFWDVRNSTE-PLLKLTNHSHWVWSVSYNHFHDQLVLSSSSDSRVMLFNIISLSSEPFGQYEDIDDEESTSNKYVKPVLEEEPPKDGIIATYEEHEDSVYASCWSCSDPWVFASLSYDGRLVINRVPRTEKFKILL 384          
The following BLAST results are available for this feature:
BLAST of EWM22147.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102568|gb|EWM22147.1|0.000e+0100.00protein tssc1 [Nannochloropsis gaditana][more]
gi|298708379|emb|CBJ48442.1|3.588e-6835.82conserved unknown protein [Ectocarpus siliculosus][more]
gi|970662844|gb|KUG00162.1|2.535e-5831.19TSSC1 protein [Phytophthora nicotianae][more]
gi|567954400|gb|ETK80037.1|2.963e-5830.41hypothetical protein L915_14207 [Phytophthora para... [more]
gi|961109509|ref|XP_014778381.1|4.551e-5833.18PREDICTED: protein TSSC1-like [Octopus bimaculoide... [more]
gi|570975893|gb|ETP37810.1|4.779e-5830.41hypothetical protein F442_14401 [Phytophthora para... [more]
gi|1021063207|emb|SAM00746.1|6.643e-5831.00hypothetical protein [Absidia glauca][more]
gi|301096623|ref|XP_002897408.1|1.552e-5732.34conserved hypothetical protein [Phytophthora infes... [more]
gi|566016989|gb|ETI39900.1|2.090e-5730.41hypothetical protein F443_14568 [Phytophthora para... [more]
gi|196008981|ref|XP_002114356.1|2.865e-5732.36hypothetical protein TRIADDRAFT_27591 [Trichoplax ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8557rna8557Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications