EWM22158.1, cds8511 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22158.1 vs. NCBI_GenBank
Match: gi|585102579|gb|EWM22158.1| (hypothetical protein Naga_100064g30 [Nannochloropsis gaditana]) HSP 1 Score: 293.123 bits (749), Expect = 1.474e-100 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 Query: 1 MPSSKSVRFEDLDDGVDDGLYGMKVCLLSSIRFPATPCYHQLLHTGQQGILKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMGMTLEPAVLNERQR 142 MPSSKSVRFEDLDDGVDDGLYGMKVCLLSSIRFPATPCYHQLLHTGQQGILKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMGMTLEPAVLNERQR Sbjct: 1 MPSSKSVRFEDLDDGVDDGLYGMKVCLLSSIRFPATPCYHQLLHTGQQGILKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMGMTLEPAVLNERQR 142
BLAST of EWM22158.1 vs. NCBI_GenBank
Match: gi|553186876|ref|XP_005854506.1| (mitochondrial import tom22-like protein [Nannochloropsis gaditana CCMP526] >gi|422294550|gb|EKU21850.1| mitochondrial import tom22-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 224.942 bits (572), Expect = 7.358e-74 Identity = 116/142 (81.69%), Postives = 117/142 (82.39%), Query Frame = 0 Query: 1 MPSSKSVRFEDLDDGVDDGLYGMKVCLLSSIRFPATPCYHQLLHTGQQGILKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMGMTLEPAVLNERQR 142 MPSSKSVRFEDLDDGVDDGLYGMK GILK LYTQAGSYRKWVRSHSKKILSWGISLAWYFSMAS+LTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMGMTLEPAVLNERQR Sbjct: 1 MPSSKSVRFEDLDDGVDDGLYGMK------------------------GILKNLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASMLTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMGMTLEPAVLNERQR 118
BLAST of EWM22158.1 vs. NCBI_GenBank
Match: gi|553182979|ref|XP_005853819.1| (hypothetical protein NGA_0443500 [Nannochloropsis gaditana CCMP526] >gi|422295246|gb|EKU22545.1| hypothetical protein NGA_0443500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 58.9214 bits (141), Expect = 7.323e-9 Identity = 46/71 (64.79%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 1 MPSSKSVRFEDLDDGVDDGLYGMKVCLLSSIRFPATPCYHQLLHTGQQGILKKLYTQAGSYRKWVRSHSKK 71 MPSSKSVRFEDLDDGVDDGLYGMK GILK LYTQAGSYRKWVRSHSKK Sbjct: 1 MPSSKSVRFEDLDDGVDDGLYGMK------------------------GILKNLYTQAGSYRKWVRSHSKK 47
BLAST of EWM22158.1 vs. NCBI_GenBank
Match: gi|397586017|gb|EJK53474.1| (hypothetical protein THAOC_27088 [Thalassiosira oceanica]) HSP 1 Score: 55.8398 bits (133), Expect = 2.045e-7 Identity = 32/100 (32.00%), Postives = 55/100 (55.00%), Query Frame = 0 Query: 48 QGILKKLYTQAGSY----RKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMG-----MTLEPAVLN 138 +G +K +T+AG+ + + + + G + +Y + SI+ ++PL E+ RE ++E +K+QVKEL QGY +LQ +G + L PAVL Sbjct: 7 EGGIKGFFTRAGTSFLAGGLYAKEKAWTLAKMGGKVGFYVATTSIVVLMPLIFEIMREGQMIETDKLQVKELRQQGYSDSQLQELGFPKAALGLSPAVLK 106
BLAST of EWM22158.1 vs. NCBI_GenBank
Match: gi|1173927896|gb|OQR81678.1| (hypothetical protein THRCLA_23313 [Thraustotheca clavata]) HSP 1 Score: 55.4546 bits (132), Expect = 3.208e-7 Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 0 Query: 46 GQQGILKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMG 129 G ++ + QAG + W + K+ G L W + + TVIPL +E+ RE V EME ++V+ L AQG+ ++ MG Sbjct: 21 GLHAMMMQRMKQAGEWATWFKKQLFKLAHKGGRLTWIIATTMLFTVIPLGIEIMREADVKEMEALRVQSLKAQGFSAIQIANMG 104
BLAST of EWM22158.1 vs. NCBI_GenBank
Match: gi|669169267|ref|XP_008619982.1| (hypothetical protein SDRG_15583 [Saprolegnia diclina VS20] >gi|813158057|ref|XP_012202377.1| hypothetical protein SPRG_07709 [Saprolegnia parasitica CBS 223.65] >gi|530728402|gb|EQC26644.1| hypothetical protein SDRG_15583 [Saprolegnia diclina VS20] >gi|641532989|gb|KDO26996.1| hypothetical protein SPRG_07709 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 55.4546 bits (132), Expect = 3.643e-7 Identity = 31/96 (32.29%), Postives = 46/96 (47.92%), Query Frame = 0 Query: 34 PATPCYHQLLHTGQQGILKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMG 129 PAT H ++ + QAG + W + K+ G W S + TVIPL +E+ RE V EME ++V+ L AQG+ ++ MG Sbjct: 17 PATGGLH--------AMMMQRMKQAGEWATWFKKQLIKLAHKGGRFTWIISTTMLFTVIPLGIEIMREADVKEMEALRVQSLKAQGFSAIQIANMG 104
BLAST of EWM22158.1 vs. NCBI_GenBank
Match: gi|1173936882|gb|OQR87759.1| (hypothetical protein ACHHYP_08109 [Achlya hypogyna]) HSP 1 Score: 54.6842 bits (130), Expect = 6.802e-7 Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 0 Query: 46 GQQGILKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQREQSVVEMEKIQVKELLAQGYPPQELQRMG 129 G ++ + QAG + W + K+ G W S + TVIPL +E+ RE V EME ++V+ L AQG+ ++ MG Sbjct: 21 GLHAMMMQRMKQAGEWVTWFKKQLLKLAHKGGRFTWILSTTMLFTVIPLGIEIMREADVKEMEALRVQSLKAQGFSAIQIANMG 104 The following BLAST results are available for this feature:
BLAST of EWM22158.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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