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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100064g30.4115.mrna |
| Orig protein id | gnl|cribi|Naga_100064g30.4115 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:208914..210328 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8538 ID=rna8538|Name=rna8538|organism=Nannochloropsis gaditana|type=mRNA|length=1962bp
ATGGCGGCACTGAATAGGGAGGCTGCATTTTTCCTCCTGGATGCGCGCAA
TGCCCTGCCCGCGCTGCGAAAAGCCCTGCGAGAGAGTGGGATGACCGGCT
CAACCTCCCCCTCTACCTCCTGTCCACCCTCCTCCTCGACCAGTCCGCTT
CCAGGCCTGCTTTTGGCGCACTTGCTACGGGAAAGGACGCCTTTCAGCCA
TGTGGGGCAAGTCTTGATGACCATGCTTTTCCGCGAGCCGTGGGTGCCCT
CTCTGGCCCTCCTTCCCTCCCTCCGCACCCTGGTGGATCGGATCGAGCAG
GGCGGGAAGGAAGAGGACAGGGTGGAAGAAAGCAAGGTCAGGCAACGCGC
CCGGAGTTTGGTGCTGCAGCAATTGCTCCATGCCCCTTCCTCCCCCCTGC
CCTCAAGCTTGCCCTCCCCAGGCCTCCCCCAGGGCGTGGTTGACCTCCTG
CGGTCCCTCCTCTTCAACGAGCTCCAAGGCCGCAAGAGGGGATTTACCCT
CCTTCCCTCCCTCCTCCCTCTCCTGGATCACGGCCCGGCTTTGAGCCCCA
GCCTCGTTCTGACCTTGGAGCAGGCGTCTTCGGAATGGGCTAAAGACTGT
TTGCCAGGGGAGGAACGGCTGCGGTGGTGGGAGTCCGTCTTCCAAGTCCT
TGTTGAGGCGGAGGAAGGAGGGGAAGGAGGGGGGGAGGGGGGGGAGGATG
AAGTATCTGTACAGGTACTTCGGACAGTGGCCTGCCGACTCTTGGATGCG
GAGGAGTTCATGGAAGTCTTTGAAGGCATGTTCTCCCTCCCAGGCGGTAG
CAAGGACGTCGGCGGCAATGAGGGTAGCCCTACCGGCGACGGTTCGCGGG
GTAGCAACGGCAAGAATGGGAAGCGGGGTACCCCCAGGAAAAAAACGAAT
CCCAAATCGCCGGAGGGTATGGAGGGGGCGAGGGCGGGGGGGAAGGAAGG
CGGGAGGAAGGGAGGGCAGGCTCAGGTGCTGGTGGCCTTGGAGCTTTTGC
AAGAGTTCCGTCGTCAAGAGGAAGCCTCGCACCACCCCGGGAAGGGCGTC
AACGACCTTCACGGCCTGCATCAATCCACGGAGACCCTGCTAGACACCGC
TAAAGCTACCCGGAAAAGCAAAGCTACCTGGTCGCGGCTCATCCCGGTTC
TCCTCCGCCTGCTCCCCCCTTCCCCTGTTTCCGACACTCGGGACCCCTCT
CCCTCCTTGCCTTCACTTGCCTCGCAAGGGGAAGCTCACGTGGAGTTTCG
GCAGCTCCTAGCTTTGGACACTGCCTGTGATATCCTCGACGAGGAGGCCA
GGGGGGAGGATGCAGGGGAGGGCGCGGGGGAGGGCGGGGCTGACCTGGAA
ACGACGCCTCTCCTGAGCCTGGTCGAGGCCACCGCCAGCCTGCACGTCCG
CAGATCGGCCGTAAAGCTTTTGGGACTCTTGGTCCGTCGCTTTCCGCGAC
TCCGCGCCAAAGCCTTGGCGTATTTGTTTGATTGGATCGGAACGGATGCC
CCTTGGGAGAGGGCTCCGTCTTTTTCCCTGCTTGTCCGGGTTTTGGAGCA
CGTGGTGCCCGCGGCCCTAGCTTCCTCCCCTGCGACATCGTCCGATCTTT
TCACGATTGCTCATACCTTAACCTCTGCCCACGACCGGATCCTCCCTTCC
CGCCGCCTGCCCCTCTACCACGCCCTCCTTCGCTCACTGGGTGATTCCCG
TCTGGCGTTCCTGCAATTCCTCCTTCTCCTCCAGCACTGTGCAGCCCCGA
ATACGGCGCGCAAGGGCGAGGAGGAGGACGGGACGGAGGCCCTGCTGGGT
TTGACGGAGGCCTTGGCGGGGAAGGTCTCCGAGATGCAAGAGTTGTTCAG
CGCCGGCGACCTGCTCGAGATGGGCCACGCCCTCCTACGAGTGGCTTGCG
GCAACGGGGTACACGGGCAGGCAGGGTTGTCCTCCCCGACGACACTGGCA
GGCTGCGGGTGA back to topprotein sequence of rna8538 >rna8538-protein ID=rna8538-protein|Name=rna8538|organism=Nannochloropsis gaditana|type=polypeptide|length=142bp
MPSSKSVRFEDLDDGVDDGLYGMKVCLLSSIRFPATPCYHQLLHTGQQGI
LKKLYTQAGSYRKWVRSHSKKILSWGISLAWYFSMASILTVIPLSLELQR
EQSVVEMEKIQVKELLAQGYPPQELQRMGMTLEPAVLNERQR back to topmRNA from alignment at KK037249.1:208914..210328+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8538 ID=rna8538|Name=rna8538|organism=Nannochloropsis gaditana|type=mRNA|length=1415bp|location=Sequence derived from alignment at KK037249.1:208914..210328+ (Nannochloropsis gaditana)
AGACGGAAAGGTCTCCTGTAAAATCGTACGGTTCTCGCCTTTTGCTGTAC
TTGTCTGCACTGCCATATCGAGAGCGAGTTGATAGAACTGACATATTGCA
TGAAGGGAGAACGTTGGGTTTGCCTTTTGATTTGCTGTTTCACAGAGACG
CAACTCCCACGGCGTGGCTTCCATCAAAATATCTTGCTGCTAGTCATAGG
TTGACTGAAATTTCTTGATAAAGTATCGAACAATCTGCCACACTTCTCCA
GCTCTCACTCAGATTGCAGTGTTTGCAACGATTGCGTCTTCACAAGAATG
TTGTGAATCCTTCACGTGtccacatcttcctcctgtaACCCTTCTGCTAA
TGCGTTCACAACATCAtgttttcccctttcctctttccgatTCTCACGCT
CCTCTGATGCCGGTATACCTTCAAAAGCCAAAGTATCATGCCCAGCAGTA
AAAGTGTGCGTTTTGAAGATCTGGACGACGGTGTGGACGACGGTCTGTAT
GGGATGAAGGTATGTCTATTGTCCTCGATCCGTTTTCCCGCCACCCCTTG
TTACCACCAACTGTTACATACGGGACAACAGGGTATCTTGAAAAAATTAT
ACACACAAGCCGGCAGCTATAGGAAGTGGGTTCGCAGCCACAGCAAGAAG
GTATGTGCATTGTCTTGTTGTGTAATAAGTTTGCGTTCCTCCCAAACACT
CATCATGCACGGCCCCCCTatgtcccccctctttccttcccccccacgct
cAGATCTTATCATGGGGGATCTCCTTGGCCTGGTACTTCAGCATGGCCAG
CATACTGACCGTTATACCCCTCTCCCTAGAGCTGCAAAGGGAGCAGTCAG
TTgtggaaatggagaaaaTCCAGGTCAAAGAATTACTCGCCCAGGGTTAC
CCACCCCAAGAACTACAACGAATGGGGATGACCTTGGAACCTGCCGTTCT
AAACGAAAGGCAGCGATAGAGGGCGTGAGTCAAGAGTGGAGCCACCTGTA
AAGTAGCCAAGACGGGGTGCCGGTGGAGCGGGGTGGGGTGGAGAACAAGA
GAAGGTCGAAGTAACATGAAGGTAGGGGATCCAACACCTGAGCATTATCT
CCAGAGATAGAGGACGAAGGATCTATCGGTATGGATGAGTGACCGTGGCT
GTACATACGTAGAGAGCGGGCGCGTGTttggcaggggaaggaggtaatgc
gatggagaaggagcctGCGGGATACAACATGAGACCTTGGGATCTTGTTC
CCGGGATGCGACCAAAGAAAATGGCAATACAAATGGAGACCTTTTTCAAA
GGGGGCGATGCTTGCCCCACGCATTATGTCGATTAGTCTCCCTGCCGCTC
TTGACcgggggcaggggtggaACCGGGGAATTTTCACCCTCAGTCCAACT
CCTCTTTTGTTTACC back to topCoding sequence (CDS) from alignment at KK037249.1:208914..210328+ >rna8538 ID=rna8538|Name=rna8538|organism=Nannochloropsis gaditana|type=CDS|length=858bp|location=Sequence derived from alignment at KK037249.1:208914..210328+ (Nannochloropsis gaditana)
ATGCCCAGCAGTAAAAGTGTGCGTTTTGAAGATCTGGACGACGGTGTGGA
CGACGGTCTGTATGGGATGAAGGTATGTCTATTGTCCTCGATCCGTTTTC
CCGCCACCCCTTGTTACCACCAACTGTTACATACGGGACAACAGGGTATC
TTGAAAAAATTATACACACAAGCCGGCAGCTATAGGAAGTGGGTTCGCAG
CCACAGCAAGAAGATCTTATCATGGGGGATCTCCTTGGCCTGGTACTTCA
GCATGGCCAGCATACTGACCGTTATACCCCTCTCCCTAGAGCTGCAAAGG
GAGCAGTCAGTTgtggaaatggagaaaaTCCAGGTCAAAGAATTACTCGC
CCAGGGTTACCCACCCCAAGAACTACAACGAATGGGGATGACCTTGGAAC
CTGCCGTTCTAAACGAAAGGCAGCGATAGATGCCCAGCAGTAAAAGTGTG
CGTTTTGAAGATCTGGACGACGGTGTGGACGACGGTCTGTATGGGATGAA
GGTATGTCTATTGTCCTCGATCCGTTTTCCCGCCACCCCTTGTTACCACC
AACTGTTACATACGGGACAACAGGGTATCTTGAAAAAATTATACACACAA
GCCGGCAGCTATAGGAAGTGGGTTCGCAGCCACAGCAAGAAGATCTTATC
ATGGGGGATCTCCTTGGCCTGGTACTTCAGCATGGCCAGCATACTGACCG
TTATACCCCTCTCCCTAGAGCTGCAAAGGGAGCAGTCAGTTgtggaaatg
gagaaaaTCCAGGTCAAAGAATTACTCGCCCAGGGTTACCCACCCCAAGA
ACTACAACGAATGGGGATGACCTTGGAACCTGCCGTTCTAAACGAAAGGC
AGCGATAG back to top
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