EWM22226.1, cds8445 (CDS) Nannochloropsis gaditana

Overview
NameEWM22226.1
Unique Namecds8445
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:44550..44648 -
Alignment locationKK037249.1:43949..44338 -
Alignment locationKK037249.1:43837..43845 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22226.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100312g1.9862.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:44550..44648 -
KK037249.1supercontigKK037249.1:43949..44338 -
KK037249.1supercontigKK037249.1:43837..43845 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR005636DTW
Homology
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BLAST of EWM22226.1 vs. NCBI_GenBank
Match: gi|585102677|gb|EWM22226.1| (hypothetical protein Naga_100312g1 [Nannochloropsis gaditana])

HSP 1 Score: 330.102 bits (845), Expect = 2.305e-114
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 
Query:    1 MQDEGEGAGGGWPLPACTFQDICSLPQQRQSCKRCRRPLRVCLCSSLPPRLFALPPHVSLLVLQHTAEARSNPVTCTVPILQAVIEGERQGLREAGYSNRGGKASSGELWRRERESVSPESGGGLCVVECSSKGVDGLKDRRVVRALRDKGSLVLYPAEGAKDSR 165
            MQDEGEGAGGGWPLPACTFQDICSLPQQRQSCKRCRRPLRVCLCSSLPPRLFALPPHVSLLVLQHTAEARSNPVTCTVPILQAVIEGERQGLREAGYSNRGGKASSGELWRRERESVSPESGGGLCVVECSSKGVDGLKDRRVVRALRDKGSLVLYPAEGAKDSR
Sbjct:    1 MQDEGEGAGGGWPLPACTFQDICSLPQQRQSCKRCRRPLRVCLCSSLPPRLFALPPHVSLLVLQHTAEARSNPVTCTVPILQAVIEGERQGLREAGYSNRGGKASSGELWRRERESVSPESGGGLCVVECSSKGVDGLKDRRVVRALRDKGSLVLYPAEGAKDSR 165
The following BLAST results are available for this feature:
BLAST of EWM22226.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102677|gb|EWM22226.1|2.305e-114100.00hypothetical protein Naga_100312g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8472rna8472Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications