rna8472, rna8472 (mRNA) Nannochloropsis gaditana

Overview
Namerna8472
Unique Namerna8472
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length591
Alignment locationKK037249.1:43837..44648 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100312g1.9862.mrna
Orig protein idgnl|cribi|Naga_100312g1.9862
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:43837..44648 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100312g1gene8213Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8472rna8472-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22226.1cds8445Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8472 ID=rna8472|Name=rna8472|organism=Nannochloropsis gaditana|type=mRNA|length=591bp
TCCTTCCCTCCCTCCCTCCCATCTTTCACCCTGCCTGGACCTCAGGCCTT
GGAACATGTCAGGAGTGAAGAGGTGTCGTGGGAGGAGCCGGCGTGGGCTG
GCATGCCCCCCGTCTTCACGGTCCGCAAAGGGCCTGCCGACCTGGTCAGG
AAGGGAGCGAGGAGCACCGCAGAGGCCGTTGCGCTCGCCCTCCGCTGGCT
AGGGGGAGAGGACGTGGCACAGGCAGTCCTTCGTGGCGTGCAAGCCGCCA
ACGTCATGCAGCTCTCCTTGATGGACCCGGCCACGGTGCGCCACCGGCGT
GAGCGGGAGGGGTACGTCGAGAACCTCTACACCCAAGGTCTCCCTGCCTT
TCCCTCCCGTCCTCCCTCCCGCCCTCTTTCCCGCCCTCCCTCGGGCCCGT
TCGCCCTGCACAGCTAGGGACATGACGTGCTCGTGCAGCGCTTGTCTCGG
ATGGGCAGGGAGAAGAGAGATTCTGCAGGCTTGGGTCTGGCCCTTGTCGC
CTGTAGGTGGAAGGTCAAATATAGCACGTCTTGGGCGTGCTGCCGCGCCT
AGATTCAAAAGAAATGTAAGGATCGTCCTGAATCCAGTTCC
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protein sequence of rna8472

>rna8472-protein ID=rna8472-protein|Name=rna8472|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MQDEGEGAGGGWPLPACTFQDICSLPQQRQSCKRCRRPLRVCLCSSLPPR
LFALPPHVSLLVLQHTAEARSNPVTCTVPILQAVIEGERQGLREAGYSNR
GGKASSGELWRRERESVSPESGGGLCVVECSSKGVDGLKDRRVVRALRDK
GSLVLYPAEGAKDSR
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mRNA from alignment at KK037249.1:43837..44648-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8472 ID=rna8472|Name=rna8472|organism=Nannochloropsis gaditana|type=mRNA|length=812bp|location=Sequence derived from alignment at KK037249.1:43837..44648- (Nannochloropsis gaditana)
ATGCAGGACGAGGGGGAGGGGGCCGGAGGCGGGTGGCCGCTGCCGGCGTG
CACCTTCCAAGACATCTGCAGCTTGCCTCAACAGCGACAGTCATGCAAGG
TAGCAAGTCCAGTGCTTGTAATCATACCCTGACGGCTATCATCCCCATTT
TCTGTTGTTTTATTGCATTTTACTTGCCTAGCTAGTTTTCTGACCTGCTC
CCTCTCTGTCCCCCCTCTCTCTCCCCTTTCCCTCCCTCTCTTGATTAAAC
CTTTTTTGGACCCATTTTCCTTGCAACCCTACTGGCTTCATCTGTCGCAC
GACACGCTAGCGATGCCGCCGTCCTTTGCGGGTATGCCTATGTTCGTCGC
TGCCACCACGTCTTTTTGCGCTGCCCCCCCATGTCTCCCTCCTGGTGCTC
CAGCACACCGCGGAGGCACGGAGCAACCCCGTGACTTGCACCGTGCCCAT
CCTACAGGCGGTAATTGAAGGAGAAAGGCAGGGCCTGCGGGAGGCAGGGT
ATTCAAATAGAGGGGGGAAAGCCTCTTCAGGGGAGCTGTGGCGGCGTGAG
AGGGAGTCGGTCTCCCCTGAGAGTGGTGGAGGGCTGTGTGTGGTCGAGTG
CTCCAGCAAGGGCGTGGACGGATTGAAAGACAGGCGAGTAGTGCGGGCAT
TGCGGGACAAGGGAAGCCTGGTGCTCTACCCGGCCGAGGGGGCCAAGGAC
GTGCGCGTGTTTTTGCGGGAGAGGGGGTTACCTGGAGGGAGGGACCGGGA
GGGACGCGAGGGAGGAGAAGGAGAGGCGGAGGGTGGGAACCTGGGGGGCC
AAGAGCCGTTGA
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Coding sequence (CDS) from alignment at KK037249.1:43837..44648-

>rna8472 ID=rna8472|Name=rna8472|organism=Nannochloropsis gaditana|type=CDS|length=1494bp|location=Sequence derived from alignment at KK037249.1:43837..44648- (Nannochloropsis gaditana)
AGCCGTTGACGATGCCGCCGTCCTTTGCGGGTATGCCTATGTTCGTCGCT
GCCACCACGTCTTTTTGCGCTGCCCCCCCATGTCTCCCTCCTGGTGCTCC
AGCACACCGCGGAGGCACGGAGCAACCCCGTGACTTGCACCGTGCCCATC
CTACAGGCGGTAATTGAAGGAGAAAGGCAGGGCCTGCGGGAGGCAGGGTA
TTCAAATAGAGGGGGGAAAGCCTCTTCAGGGGAGCTGTGGCGGCGTGAGA
GGGAGTCGGTCTCCCCTGAGAGTGGTGGAGGGCTGTGTGTGGTCGAGTGC
TCCAGCAAGGGCGTGGACGGATTGAAAGACAGGCGAGTAGTGCGGGCATT
GCGGGACAAGGGAAGCCTGGTGCTCTACCCGGCCGAGGGGGCCAAGGACA
TGCAGGACGAGGGGGAGGGGGCCGGAGGCGGGTGGCCGCTGCCGGCGTGC
ACCTTCCAAGACATCTGCAGCTTGCCTCAACAGCGACAGTCATGCAAGAG
CCGTTGACGATGCCGCCGTCCTTTGCGGGTATGCCTATGTTCGTCGCTGC
CACCACGTCTTTTTGCGCTGCCCCCCCATGTCTCCCTCCTGGTGCTCCAG
CACACCGCGGAGGCACGGAGCAACCCCGTGACTTGCACCGTGCCCATCCT
ACAGGCGGTAATTGAAGGAGAAAGGCAGGGCCTGCGGGAGGCAGGGTATT
CAAATAGAGGGGGGAAAGCCTCTTCAGGGGAGCTGTGGCGGCGTGAGAGG
GAGTCGGTCTCCCCTGAGAGTGGTGGAGGGCTGTGTGTGGTCGAGTGCTC
CAGCAAGGGCGTGGACGGATTGAAAGACAGGCGAGTAGTGCGGGCATTGC
GGGACAAGGGAAGCCTGGTGCTCTACCCGGCCGAGGGGGCCAAGGACATG
CAGGACGAGGGGGAGGGGGCCGGAGGCGGGTGGCCGCTGCCGGCGTGCAC
CTTCCAAGACATCTGCAGCTTGCCTCAACAGCGACAGTCATGCAAGAGCC
GTTGACGATGCCGCCGTCCTTTGCGGGTATGCCTATGTTCGTCGCTGCCA
CCACGTCTTTTTGCGCTGCCCCCCCATGTCTCCCTCCTGGTGCTCCAGCA
CACCGCGGAGGCACGGAGCAACCCCGTGACTTGCACCGTGCCCATCCTAC
AGGCGGTAATTGAAGGAGAAAGGCAGGGCCTGCGGGAGGCAGGGTATTCA
AATAGAGGGGGGAAAGCCTCTTCAGGGGAGCTGTGGCGGCGTGAGAGGGA
GTCGGTCTCCCCTGAGAGTGGTGGAGGGCTGTGTGTGGTCGAGTGCTCCA
GCAAGGGCGTGGACGGATTGAAAGACAGGCGAGTAGTGCGGGCATTGCGG
GACAAGGGAAGCCTGGTGCTCTACCCGGCCGAGGGGGCCAAGGACATGCA
GGACGAGGGGGAGGGGGCCGGAGGCGGGTGGCCGCTGCCGGCGTGCACCT
TCCAAGACATCTGCAGCTTGCCTCAACAGCGACAGTCATGCAAG
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Synonyms
Publications