|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100597g5.3274.mrna |
| Orig protein id | gnl|cribi|Naga_100597g5.3274 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:1254..3075 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8458 ID=rna8458|Name=rna8458|organism=Nannochloropsis gaditana|type=mRNA|length=249bp
ATGCAAACCTCTTCCTTCAAGGTCTTTATGAATCTGTGGCACCACATACT
TTTTAAGTTGCTGATCAACAGATCTTGCCAGAAAATTTTGGAGGATAGCG
GTCTCTATCGACGTCACGCCCTTGAGGAGGGCAGTCAGAGCTTGATTCAG
GCTCGAAGTCGGATGAAGTTCATAGGAAGAAGAGGTGCAAAAGTTGTGCA
GCGGGGCAATCTCACTTGGGAGGTACGGTCTTTCGCCAGCGCATACTGA back to topprotein sequence of rna8458 >rna8458-protein ID=rna8458-protein|Name=rna8458|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
MEKAEHNEIKVAFTVERALIEGKQRTHCSLFYRLICAQYIKVPLKHHRRA
RSKATRLTRQDICDYQSTHSIAYATYQIKMRVSFALVALMAAVILSLSSA
FVPPTPRMTRQARTVSKMTPMDVVSTESIQAASDVLLAAKDTDFGGYTGP
IAGLITLGALILVLAPPLTTKPTEE back to topmRNA from alignment at KK037249.1:1254..3075+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8458 ID=rna8458|Name=rna8458|organism=Nannochloropsis gaditana|type=mRNA|length=1822bp|location=Sequence derived from alignment at KK037249.1:1254..3075+ (Nannochloropsis gaditana)
ATGGAAAAAGCAGAGCATAACGAAATAAAAGTAGCCGTGAGTATGACGTT
GGAGGTATATAGCTTTCCTGACAGTGGGTGAGAAGAcatcttcatcttct
ggCCTAGTTTACTGTTGAAAGAGCCCTCATCGAAGGAAAACAACGCACTC
ATTGTTCCTTATTTTATCGACTTATTTGTGCCCAGTATATTAAAGTACCT
CTAAAACACCATAGAAGAGCACGATCAAAAGCTACGAGGCTTACTAGGCA
GGATATCTGTGACTATCAATCAACCCATAGCATCGCATACGCTGTCATAT
AGGttccctaaccctaaccctaaccctaaccctaaccctaaccctaaccc
taaccctaaccctaaccctaaccctaaccctaaccctaaccctaacccta
accctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaac
cctaaccctaaccctaaccctgaAGCCAGCGTGAGTATCAACCGAATACC
ATCACAACGCCTGAGCCCGACGCTATTAGAGACTCTCCTATCTCCACCAC
TGGGGGACGGGCGAATGGGGATCCTCGACCCTCCATGACTGGTGTGAAAA
CTGTGGTATTTGGAGAGCGAAATTGAGGTTTCTTCATAGAGGTAAACACA
GAAAGCACTGTGCGTGGCATTCCGGGGCACCGTTAGCAGGGAATATGCGG
ACTTGTCACTGAGGTCTAGACGAGGGAGTCCTAGGCTCGGAGGGTTGAGG
CTAGAAGATATTGAATCCATCGGAGAACCTGAGACTGTAGCATGTCATAG
GGGCGTAAgtcgtcatcctccaagGGCCTGAGGcttcaagctcctcctcc
cgggccttcGAAGCGGCGAGCGAGGGCACGCCGAAAGATACAAAGGAAAG
CAGGCCCTCGACGACGGTCGGAGGCCCCCCCATGGgcgttcccctcctct
ttaaGCCATTGCAATTGGCTATTGATAGTATTGTCATCTTTTAATAGTGT
GATGATTGTCTTATCGGGTCGTGCATTGCATGAACGGGTTATGTGAGGGT
TGGAAAGGGCGCTCCACCTGTCGTCGCcgcccaaggcctccctcgtcctt
ctcgagTCAAAACAGCATGCATGTTCAAGAAGTTGAGACCGACAATGACT
CATATTTAACTCCTGGTGTAGAGTAGGAAATCAGATCTTGGGATTCTGTT
GCCGTAGAGCGACGCCTCACACCTCTCTTGCGGAACATGATTCCCTCGTG
TCGTCAACCCACCGATCCTCAACATACAACACATGAGCCCTCACAACGCG
CAGACCTTACCAGTAACAGACATATCAAATCAAGATGCGTGTGTCATTTG
CACTCGTAGCCCTAATGGCTGCCGTTATCTTgagcctctcctccgccttc
gtGCCTCCTACGCCTCGCATGACCCGCCAGGTAACGCCGTAGCTCTGTCG
CACCATctccgccttttctttctcgaTAGAGTCACTGAGATGTTAACGGG
AAGTCACTTGTGGCGAGGAGTAAGATCTGTTACAATTGCTGTAGCTCCGA
AGAATTCTTTTCCAAGTCGAGAGTTCATGGACCTTCTCTAAACGATGCGT
CCTCtgttcccccccacccacaTGAAGGCTCGCACGGTGAGCAAGATGAC
TCCCATGGACGTGGTGTCGACGGAGAGCATTCAGGCAGCGTCTGACGTGC
TGTTGGCAGCCAAGGACACAGACTTCGGCGGGTACACGGGGCCCATTGCC
GGGCTTATTACCCTCGGCGCTCTCATCCTCGTTTTGGCGCCCCCACTGAC
CACTAAGCCCACGGAGGAATAA back to topCoding sequence (CDS) from alignment at KK037249.1:1254..3075+ >rna8458 ID=rna8458|Name=rna8458|organism=Nannochloropsis gaditana|type=CDS|length=2112bp|location=Sequence derived from alignment at KK037249.1:1254..3075+ (Nannochloropsis gaditana)
ATGGAAAAAGCAGAGCATAACGAAATAAAAGTAGCCTTTACTGTTGAAAG
AGCCCTCATCGAAGGAAAACAACGCACTCATTGTTCCTTATTTTATCGAC
TTATTTGTGCCCAGTATATTAAAGTACCTCTAAAACACCATAGAAGAGCA
CGATCAAAAGCTACGAGGCTTACTAGGCAGGATATCTGTGACTATCAATC
AACCCATAGCATCGCATACGCTACATATCAAATCAAGATGCGTGTGTCAT
TTGCACTCGTAGCCCTAATGGCTGCCGTTATCTTgagcctctcctccgcc
ttcgtGCCTCCTACGCCTCGCATGACCCGCCAGGCTCGCACGGTGAGCAA
GATGACTCCCATGGACGTGGTGTCGACGGAGAGCATTCAGGCAGCGTCTG
ACGTGCTGTTGGCAGCCAAGGACACAGACTTCGGCGGGTACACGGGGCCC
ATTGCCGGGCTTATTACCCTCGGCGCTCTCATCCTCGTTTTGGCGCCCCC
ACTGACCACTAAGCCCACGGAGGAATAAATGGAAAAAGCAGAGCATAACG
AAATAAAAGTAGCCTTTACTGTTGAAAGAGCCCTCATCGAAGGAAAACAA
CGCACTCATTGTTCCTTATTTTATCGACTTATTTGTGCCCAGTATATTAA
AGTACCTCTAAAACACCATAGAAGAGCACGATCAAAAGCTACGAGGCTTA
CTAGGCAGGATATCTGTGACTATCAATCAACCCATAGCATCGCATACGCT
ACATATCAAATCAAGATGCGTGTGTCATTTGCACTCGTAGCCCTAATGGC
TGCCGTTATCTTgagcctctcctccgccttcgtGCCTCCTACGCCTCGCA
TGACCCGCCAGGCTCGCACGGTGAGCAAGATGACTCCCATGGACGTGGTG
TCGACGGAGAGCATTCAGGCAGCGTCTGACGTGCTGTTGGCAGCCAAGGA
CACAGACTTCGGCGGGTACACGGGGCCCATTGCCGGGCTTATTACCCTCG
GCGCTCTCATCCTCGTTTTGGCGCCCCCACTGACCACTAAGCCCACGGAG
GAATAAATGGAAAAAGCAGAGCATAACGAAATAAAAGTAGCCTTTACTGT
TGAAAGAGCCCTCATCGAAGGAAAACAACGCACTCATTGTTCCTTATTTT
ATCGACTTATTTGTGCCCAGTATATTAAAGTACCTCTAAAACACCATAGA
AGAGCACGATCAAAAGCTACGAGGCTTACTAGGCAGGATATCTGTGACTA
TCAATCAACCCATAGCATCGCATACGCTACATATCAAATCAAGATGCGTG
TGTCATTTGCACTCGTAGCCCTAATGGCTGCCGTTATCTTgagcctctcc
tccgccttcgtGCCTCCTACGCCTCGCATGACCCGCCAGGCTCGCACGGT
GAGCAAGATGACTCCCATGGACGTGGTGTCGACGGAGAGCATTCAGGCAG
CGTCTGACGTGCTGTTGGCAGCCAAGGACACAGACTTCGGCGGGTACACG
GGGCCCATTGCCGGGCTTATTACCCTCGGCGCTCTCATCCTCGTTTTGGC
GCCCCCACTGACCACTAAGCCCACGGAGGAATAAATGGAAAAAGCAGAGC
ATAACGAAATAAAAGTAGCCTTTACTGTTGAAAGAGCCCTCATCGAAGGA
AAACAACGCACTCATTGTTCCTTATTTTATCGACTTATTTGTGCCCAGTA
TATTAAAGTACCTCTAAAACACCATAGAAGAGCACGATCAAAAGCTACGA
GGCTTACTAGGCAGGATATCTGTGACTATCAATCAACCCATAGCATCGCA
TACGCTACATATCAAATCAAGATGCGTGTGTCATTTGCACTCGTAGCCCT
AATGGCTGCCGTTATCTTgagcctctcctccgccttcgtGCCTCCTACGC
CTCGCATGACCCGCCAGGCTCGCACGGTGAGCAAGATGACTCCCATGGAC
GTGGTGTCGACGGAGAGCATTCAGGCAGCGTCTGACGTGCTGTTGGCAGC
CAAGGACACAGACTTCGGCGGGTACACGGGGCCCATTGCCGGGCTTATTA
CCCTCGGCGCTCTCATCCTCGTTTTGGCGCCCCCACTGACCACTAAGCCC
ACGGAGGAATAA back to top
|