EWM22240.1, cds8431 (CDS) Nannochloropsis gaditana

Overview
NameEWM22240.1
Unique Namecds8431
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:1254..1289 +
Alignment locationKK037249.1:1361..1546 +
Alignment locationKK037249.1:2573..2683 +
Alignment locationKK037249.1:2881..3075 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22240.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100597g5.3274.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:1254..1289 +
KK037249.1supercontigKK037249.1:1361..1546 +
KK037249.1supercontigKK037249.1:2573..2683 +
KK037249.1supercontigKK037249.1:2881..3075 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM22240.1 vs. NCBI_GenBank
Match: gi|585102697|gb|EWM22240.1| (hypothetical protein Naga_100597g5 [Nannochloropsis gaditana])

HSP 1 Score: 359.377 bits (921), Expect = 1.210e-125
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 
Query:    1 MEKAEHNEIKVAFTVERALIEGKQRTHCSLFYRLICAQYIKVPLKHHRRARSKATRLTRQDICDYQSTHSIAYATYQIKMRVSFALVALMAAVILSLSSAFVPPTPRMTRQARTVSKMTPMDVVSTESIQAASDVLLAAKDTDFGGYTGPIAGLITLGALILVLAPPLTTKPTEE 175
            MEKAEHNEIKVAFTVERALIEGKQRTHCSLFYRLICAQYIKVPLKHHRRARSKATRLTRQDICDYQSTHSIAYATYQIKMRVSFALVALMAAVILSLSSAFVPPTPRMTRQARTVSKMTPMDVVSTESIQAASDVLLAAKDTDFGGYTGPIAGLITLGALILVLAPPLTTKPTEE
Sbjct:    1 MEKAEHNEIKVAFTVERALIEGKQRTHCSLFYRLICAQYIKVPLKHHRRARSKATRLTRQDICDYQSTHSIAYATYQIKMRVSFALVALMAAVILSLSSAFVPPTPRMTRQARTVSKMTPMDVVSTESIQAASDVLLAAKDTDFGGYTGPIAGLITLGALILVLAPPLTTKPTEE 175
[Close]
BLAST of EWM22240.1 vs. NCBI_GenBank
Match: gi|585099579|gb|EWM20171.1| (hypothetical protein Naga_101277g2 [Nannochloropsis gaditana])

HSP 1 Score: 144.436 bits (363), Expect = 1.303e-41
Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 0 
Query:    1 MEKAEHNEIKVA------FTVERALIEGKQRTHCSLFYRLICAQYIKVPLKHHRRARSKATRLTRQDICDYQSTHSIAYA 74
            ME+AEHNEIK A      FTVERALIEGKQRTHCSLFYRLI AQYIKVPLKHHRRARSKATRLTRQDICDYQSTHS+AYA
Sbjct:    1 MERAEHNEIKAAVSMTLEFTVERALIEGKQRTHCSLFYRLIRAQYIKVPLKHHRRARSKATRLTRQDICDYQSTHSVAYA 80
The following BLAST results are available for this feature:
BLAST of EWM22240.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102697|gb|EWM22240.1|1.210e-125100.00hypothetical protein Naga_100597g5 [Nannochloropsi... [more]
gi|585099579|gb|EWM20171.1|1.303e-4187.50hypothetical protein Naga_101277g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8458rna8458Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications