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Properties
| Property Name | Value |
|---|
| Product | rab gdp dissociation inhibitor alpha |
| Orig transcript id | gnl|cribi|Naga_101877g1.8859.mrna |
| Orig protein id | gnl|cribi|Naga_101877g1.8859 |
| Gene | GDIC1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:595301..596706 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8409 ID=rna8409|Name=rna8409|organism=Nannochloropsis gaditana|type=mRNA|length=1189bp
ATGGCGGAGGACGTCCGAGAAGCTGACTTGCGGTCTTTGAGTGATCAGGT
GCCTGAAGCTGCGGATGGCCTGGAGGAAATTAGTTTGCCACCATGGTTTG
CAGAGCAATTAGGCCCACCGTCCGCACCCGATCAGGACAAGCACGGCAGC
CATCGCGTGGAAATTTCCCCGTCCTTCCACCTGCACATTTCACTTGCCGA
GGATGATGGTGCGAATGGGAGCCTGTTCGCGTTTTCCATTTGGAATGGTA
GCCTTTTGTTGGCTCGTTACCTCGACAACCATCCTTCGTTTGTCCGGGAC
AAGCGCGTCATCGAATTTGGAGCTGCGGGGGCATTACCCTCGATGGTGGC
TTTGAGGCACGGCGGCGCCTACGTGATGATTACCGACTATCCGGACGCTC
GATTACTGCAAGCCATCGAGAGGACGTTGCAGGATCGTCGCAATGCCGCG
TGGTTGGGAGCAGGGAAAACCGCAGGGCGGGTGGGCATCATGGGACATGT
GTGGGGGAAGGACACGGCAGGGTTGTTGGGAGAGGAGAGCACCAGGAACG
GACAAGTGCGTGCATGCTTGAGACAGACGGGCGACGACTTGGGCAAGGTG
CGCACAGAGGGGAGGAGCAGTGGGCTGTACGACCTGGCATTGGTGGGCGA
ATGTCTTTGGCTGCACCGGGAGCATGGAAACCTTCTGCAGTCCCTGCATT
CCACGCTTTGCCCCGGTGGCACCGCTCTGATCTCCTTCGCGCACCATGTG
CCAGGATGCGAGGACAAGGACATGAGATTTTTCATGTTGGCGGCCCAAGC
CAGACAGTACGGCAATGAACAGCCCGTGTGGTTCGAAGTCCAGAAGTTGT
TGGAGAAGAACATGGTATGCCTGCACCGGGAAGGGAAGGTGTCCAAGCAG
TTCCTCTACTCGTTGACTAAGAGATCAGGGGGTTGAAGGGCGTTGAAGGG
GAAAAAGAGGTGGCTTCCATTTTCAGCCGACGTGCCTGTGTGGAGGAAGA
ATCTGTTTATGAGCAAAATACATACATCATGTAATTAAGCGTTTGCGTGT
ACCAAGAAAAGGCTGTTCAGCCATTCAAGCGGGCAAAGATACCATCATTT
AATAAAAATACAACATCCTGTGTACTTTCTACGTCGTACTGGACGACTAA
AGCAGCTATCCTTCTCTCCGCTGCGCCAACCTTCCCTCC back to topprotein sequence of rna8409 >rna8409-protein ID=rna8409-protein|Name=rna8409|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
MACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSL
IGLFEKRRFRNFLSYLAKYDEKDPSTFGGYDLSRMTMRGLYDKYGLDEGT
RTFTGHAMALHLDDSYLERPALETVKAIQLYVYSLERYGKSPYIYPIYGL
GGLPEGFSRLCAINGGTFMLDHSVDEI back to topmRNA from alignment at KK037248.1:595301..596706+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8409 ID=rna8409|Name=rna8409|organism=Nannochloropsis gaditana|type=mRNA|length=1406bp|location=Sequence derived from alignment at KK037248.1:595301..596706+ (Nannochloropsis gaditana)
cccccgcccttcccgtTCAGGGAGCAACCGGGACTACAATGTGGACCTGG
TGCCCAAGTTCATCATGGCCTGCGGCAATCTGGTGaagatcctcctccac
accaAGGTATGAATATCGTATTAAGGCAGAGAGGTGTGACCTTCGGGTTG
CTCCTTGCCTCCGGGCAgcaagggcgagggggggagagggggaaggaatg
tgATGGATCAGGTACCCACGCTTTCTCCCCACAGGTGACGCGCTACTTGG
AGTTCAAGAACGTGGATGGCAGCTACGTCTTCCGACAGGGCAAGATCTAC
AAGGTacatcttccctccatccttccctccctccctccctccctttctct
ctttcttgcccTCTGGCTTTCCTCTCGTCTTCCCGAtgtctccgccctcc
tcccgaaCATACGAGTTATGTTTCCATTATGCATGGCGTGtcctgacctc
ctccctccctccctccctcactcccacccaccccccttcctccctccctc
cctgcctctgcaGGTACCTGCCACCTTGGACGAAGCTCTCATGACGTCCC
TGATCGGCCTCTTCGAGAAACGACGCTTCAGGAACTTTCTCTCGTACCTC
GCCAAATATGATGAAAAGGACCCGAGCACCTTTGGAggtaaggaagagga
gaaggaagctgggaagagagggaagcgagCGTTGCCCGTGATGTCTCACC
TTGCCTCCGGCGGATGGGTAGGGCTCtcaaagagagagagagagagccaG
AGAGAGAGCCAGAGAGAGCCAGAGAGAGCCACACATGGTTATACGCGCAC
ATAACCCAatcacccctcctcccctccatgaTGTGTCGTCGGCGCGATTT
TCTCAGGCTACGACCTGTCCCGTATGACCATGCGCGGCCTCTACGACAAG
TATGGCCTTGACGAGGGGACACGGACCTTCACGGGTaggccggggcggag
ggagggagggagggagggaggggaggacctgggaaggacggcggTCGTGT
TGATCGCCCGGCGGCAAGAAGGTGTCGATTACAGCTGATttatccttcct
ttctcctcccctccctcggcccctccttccttcctcaggGCACGCCATGG
CCTTGCACTTGGATGACAGCTACTTGGAGAGACCCGCCCTCGAGACGGTG
AAAGCGATCCAGCTTTATGTCTACTCGTTGGAGCGGTACGGGAAGAGCCC
TTACATATACCCGATTTACGGCctgggaggtagggagggagggaggtagg
gagggaggtagggagggagggagggcagaaaaGCCCCATGTGTGGGGCCA
TCCTAATGCCTTACCTTTTCCACTTCAGGCCTGCCAGAGGGCTTCTCCCG
CCTATGCGCCATCAATGGAGGCACATTCATGCTAGACCACAGCGTGGACG
AGATCC back to topCoding sequence (CDS) from alignment at KK037248.1:595301..596706+ >rna8409 ID=rna8409|Name=rna8409|organism=Nannochloropsis gaditana|type=CDS|length=3192bp|location=Sequence derived from alignment at KK037248.1:595301..596706+ (Nannochloropsis gaditana)
ATGGCCTGCGGCAATCTGGTGaagatcctcctccacaccaAGGTGACGCG
CTACTTGGAGTTCAAGAACGTGGATGGCAGCTACGTCTTCCGACAGGGCA
AGATCTACAAGGTACCTGCCACCTTGGACGAAGCTCTCATGACGTCCCTG
ATCGGCCTCTTCGAGAAACGACGCTTCAGGAACTTTCTCTCGTACCTCGC
CAAATATGATGAAAAGGACCCGAGCACCTTTGGAgGCTACGACCTGTCCC
GTATGACCATGCGCGGCCTCTACGACAAGTATGGCCTTGACGAGGGGACA
CGGACCTTCACGGgGCACGCCATGGCCTTGCACTTGGATGACAGCTACTT
GGAGAGACCCGCCCTCGAGACGGTGAAAGCGATCCAGCTTTATGTCTACT
CGTTGGAGCGGTACGGGAAGAGCCCTTACATATACCCGATTTACGGCctg
ggagGCCTGCCAGAGGGCTTCTCCCGCCTATGCGCCATCAATGGAGGCAC
ATTCATGCTAGACCACAGCGTGGACGAGATCCATGGCCTGCGGCAATCTG
GTGaagatcctcctccacaccaAGGTGACGCGCTACTTGGAGTTCAAGAA
CGTGGATGGCAGCTACGTCTTCCGACAGGGCAAGATCTACAAGGTACCTG
CCACCTTGGACGAAGCTCTCATGACGTCCCTGATCGGCCTCTTCGAGAAA
CGACGCTTCAGGAACTTTCTCTCGTACCTCGCCAAATATGATGAAAAGGA
CCCGAGCACCTTTGGAgGCTACGACCTGTCCCGTATGACCATGCGCGGCC
TCTACGACAAGTATGGCCTTGACGAGGGGACACGGACCTTCACGGgGCAC
GCCATGGCCTTGCACTTGGATGACAGCTACTTGGAGAGACCCGCCCTCGA
GACGGTGAAAGCGATCCAGCTTTATGTCTACTCGTTGGAGCGGTACGGGA
AGAGCCCTTACATATACCCGATTTACGGCctgggagGCCTGCCAGAGGGC
TTCTCCCGCCTATGCGCCATCAATGGAGGCACATTCATGCTAGACCACAG
CGTGGACGAGATCCATGGCCTGCGGCAATCTGGTGaagatcctcctccac
accaAGGTGACGCGCTACTTGGAGTTCAAGAACGTGGATGGCAGCTACGT
CTTCCGACAGGGCAAGATCTACAAGGTACCTGCCACCTTGGACGAAGCTC
TCATGACGTCCCTGATCGGCCTCTTCGAGAAACGACGCTTCAGGAACTTT
CTCTCGTACCTCGCCAAATATGATGAAAAGGACCCGAGCACCTTTGGAgG
CTACGACCTGTCCCGTATGACCATGCGCGGCCTCTACGACAAGTATGGCC
TTGACGAGGGGACACGGACCTTCACGGgGCACGCCATGGCCTTGCACTTG
GATGACAGCTACTTGGAGAGACCCGCCCTCGAGACGGTGAAAGCGATCCA
GCTTTATGTCTACTCGTTGGAGCGGTACGGGAAGAGCCCTTACATATACC
CGATTTACGGCctgggagGCCTGCCAGAGGGCTTCTCCCGCCTATGCGCC
ATCAATGGAGGCACATTCATGCTAGACCACAGCGTGGACGAGATCCATGG
CCTGCGGCAATCTGGTGaagatcctcctccacaccaAGGTGACGCGCTAC
TTGGAGTTCAAGAACGTGGATGGCAGCTACGTCTTCCGACAGGGCAAGAT
CTACAAGGTACCTGCCACCTTGGACGAAGCTCTCATGACGTCCCTGATCG
GCCTCTTCGAGAAACGACGCTTCAGGAACTTTCTCTCGTACCTCGCCAAA
TATGATGAAAAGGACCCGAGCACCTTTGGAgGCTACGACCTGTCCCGTAT
GACCATGCGCGGCCTCTACGACAAGTATGGCCTTGACGAGGGGACACGGA
CCTTCACGGgGCACGCCATGGCCTTGCACTTGGATGACAGCTACTTGGAG
AGACCCGCCCTCGAGACGGTGAAAGCGATCCAGCTTTATGTCTACTCGTT
GGAGCGGTACGGGAAGAGCCCTTACATATACCCGATTTACGGCctgggag
GCCTGCCAGAGGGCTTCTCCCGCCTATGCGCCATCAATGGAGGCACATTC
ATGCTAGACCACAGCGTGGACGAGATCCATGGCCTGCGGCAATCTGGTGa
agatcctcctccacaccaAGGTGACGCGCTACTTGGAGTTCAAGAACGTG
GATGGCAGCTACGTCTTCCGACAGGGCAAGATCTACAAGGTACCTGCCAC
CTTGGACGAAGCTCTCATGACGTCCCTGATCGGCCTCTTCGAGAAACGAC
GCTTCAGGAACTTTCTCTCGTACCTCGCCAAATATGATGAAAAGGACCCG
AGCACCTTTGGAgGCTACGACCTGTCCCGTATGACCATGCGCGGCCTCTA
CGACAAGTATGGCCTTGACGAGGGGACACGGACCTTCACGGgGCACGCCA
TGGCCTTGCACTTGGATGACAGCTACTTGGAGAGACCCGCCCTCGAGACG
GTGAAAGCGATCCAGCTTTATGTCTACTCGTTGGAGCGGTACGGGAAGAG
CCCTTACATATACCCGATTTACGGCctgggagGCCTGCCAGAGGGCTTCT
CCCGCCTATGCGCCATCAATGGAGGCACATTCATGCTAGACCACAGCGTG
GACGAGATCCATGGCCTGCGGCAATCTGGTGaagatcctcctccacacca
AGGTGACGCGCTACTTGGAGTTCAAGAACGTGGATGGCAGCTACGTCTTC
CGACAGGGCAAGATCTACAAGGTACCTGCCACCTTGGACGAAGCTCTCAT
GACGTCCCTGATCGGCCTCTTCGAGAAACGACGCTTCAGGAACTTTCTCT
CGTACCTCGCCAAATATGATGAAAAGGACCCGAGCACCTTTGGAgGCTAC
GACCTGTCCCGTATGACCATGCGCGGCCTCTACGACAAGTATGGCCTTGA
CGAGGGGACACGGACCTTCACGGgGCACGCCATGGCCTTGCACTTGGATG
ACAGCTACTTGGAGAGACCCGCCCTCGAGACGGTGAAAGCGATCCAGCTT
TATGTCTACTCGTTGGAGCGGTACGGGAAGAGCCCTTACATATACCCGAT
TTACGGCctgggagGCCTGCCAGAGGGCTTCTCCCGCCTATGCGCCATCA
ATGGAGGCACATTCATGCTAGACCACAGCGTGGACGAGATCC back to top
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