EWM22295.1, cds8379 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|585102776|gb|EWM22295.1| (hypothetical protein Naga_100933g3 [Nannochloropsis gaditana]) HSP 1 Score: 426.402 bits (1095), Expect = 4.926e-151 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 Query: 1 MRVLPYVFTLVCAVPAFAFMPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210 MRVLPYVFTLVCAVPAFAFMPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF Sbjct: 1 MRVLPYVFTLVCAVPAFAFMPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|553189260|ref|XP_005854965.1| (hypothetical protein NGA_0386800 [Nannochloropsis gaditana CCMP526] >gi|422294092|gb|EKU21392.1| hypothetical protein NGA_0386800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 385.571 bits (989), Expect = 4.421e-135 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 Query: 20 MPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210 MPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF Sbjct: 1 MPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 191
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1210526014|dbj|GAX14932.1| (hypothetical protein FisN_12Lh365 [Fistulifera solaris]) HSP 1 Score: 143.28 bits (360), Expect = 2.373e-39 Identity = 71/159 (44.65%), Postives = 104/159 (65.41%), Query Frame = 0 Query: 53 VLGVLASLSPS--FPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209 V G +A +SPS F AQ G P V+ P AE+D DILKS VQ+ LK ++ Y+ V +++ L ++QV++ + KDLD + LRD+LN VNT F EDTQRGTDR++R+I+QD+ ELE A Q+ G RS +++++ KL KL+ AF++ L + Sbjct: 52 VTGGIAIVSPSDAFAAQYGEFGKGSSPGVLDPKTAEIDADILKSDAVQSALKKVKGYRSAVQDMQAALKADSQVNVRKTIIKDLDFADLRDTLNTVNTAFEEDTQRGTDRLIRVIMQDITELEQANTQKDGIPRSPRRVEIMEGKLAKLEKAFSDFLAF 210
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1210517530|dbj|GAX23787.1| (hypothetical protein FisN_12Hh365 [Fistulifera solaris]) HSP 1 Score: 140.584 bits (353), Expect = 3.042e-38 Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = 0 Query: 53 VLGVLASLSPS--FPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209 V G +A PS F AQ G P V+ P AE+D DILKS VQ+ LK ++ Y+ V +++ L ++QV++ + KDLD + LRD+LN VNT F EDTQRGTDR++R+I+QD+ ELE A Q+ G RS +++++ KL KL+ AF++ L + Sbjct: 52 VTGGIAFGGPSDAFAAQYGEFGKGSSPGVLDPKTAEIDADILKSDAVQSALKKVKGYRSAVQDMQAALKADSQVNVRKTIIKDLDFADLRDTLNTVNTAFEEDTQRGTDRLIRVIMQDITELEQANTQKDGIPRSPRRVEIMEGKLAKLEKAFSDFLAF 210
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|223996191|ref|XP_002287769.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976885|gb|EED95212.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 140.969 bits (354), Expect = 1.213e-37 Identity = 80/183 (43.72%), Postives = 109/183 (59.56%), Query Frame = 0 Query: 30 ITMSAEMGQDRRDVVKSTFGF--ASVLGVLASLSPSFPAQAGYLNSDKL----PEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAEL 206 I ++AE G V + GF SV + ASL+ P QA PEV+ P DA +D+DILKS VQ L A+R Y++ V ++S LA ++Q D+ ++RKD D S +R LN +N EDTQRGTDRIVR ILQD+ ELE A +Q+ G RSD +LK + KL KL+ +F ++ Sbjct: 79 IALNAEKG------VSTRIGFLQTSVATIGASLTL-LPGQANAAKYGGFGAGSPEVVDPKDAIIDEDILKSDSVQKGLAAVRGYQQSVVDMKSALASDSQADIGPKIRKDFDFSVIRTDLNAINAALDEDTQRGTDRIVRAILQDITELEVAQKQKAGVPRSDKRLKTVCGKLDKLEKSFRKI 254
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|397647215|gb|EJK77607.1| (hypothetical protein THAOC_00549 [Thalassiosira oceanica]) HSP 1 Score: 134.035 bits (336), Expect = 1.410e-35 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 0 Query: 77 PEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209 PEVI P DA VD+DILKS VQ L+A++ YK+ L++ L+ + Q D+ +++RKD D S +R LN +N EDTQRGTDRIVR ILQD+ ELE + +Q+PG RS+ +L + KL KL+ +F + L + Sbjct: 83 PEVIDPKDALVDEDILKSEPVQKALEAVKGYKQSTVDLKTVLSSDNQADIGAKIRKDFDFSVIRTDLNAINAALDEDTQRGTDRIVRAILQDITELEVSQKQKPGVPRSEKRLGNVIGKLDKLEKSFDDYLAF 215
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1072229213|gb|OEU13948.1| (hypothetical protein FRACYDRAFT_210017 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 133.65 bits (335), Expect = 2.269e-35 Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 0 Query: 50 FASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209 F V GV A P+ PA AG+ N V+ P DA +D+D+ K++ VQ LK ++++ V+ ++ LA N+QVDL +RK+ + S LR LN +N+ F E+TQRGTDR++R+ILQD+NELE Q+ G RSD ++ + K+ KL AF LL + Sbjct: 48 FVVVGGVTAFGVPA-PANAGWANGPG-SGVLDPKDAIIDEDVFKTAAVQKALKCVQSFSSAVTDMKKSLAANSQVDLKPVIRKEFEASKLRAELNTLNSAFDEETQRGTDRLIRVILQDLNELEVTNAQKDGVPRSDVRVSKMNGKIDKLQVAFDSLLKF 205
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|219114969|ref|XP_002178280.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410015|gb|EEC49945.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 127.872 bits (320), Expect = 2.592e-33 Identity = 67/155 (43.23%), Postives = 96/155 (61.94%), Query Frame = 0 Query: 55 GVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209 G L S S + A+ G + PEV+ P+ AE+D DIL SS VQ LK + Y+ V ++ L + Q +L + K+LD + +RD++N +NT F EDTQRGTDR++R+ILQD+ ELE A Q+ G RS +L+ + KL KLD AF + L + Sbjct: 52 GFLFSPSQAMAAKYGSFGAGS-PEVLDPTTAEIDTDILASSAVQGALKKVEGYRSIVKDMQKALESDGQANLRPIIIKNLDFAKIRDTMNTLNTAFEEDTQRGTDRLIRVILQDITELEQANLQKDGIPRSPRRLENLQGKLVKLDLAFEDYLAF 205
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|299471248|emb|CBN79103.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 115.161 bits (287), Expect = 3.158e-28 Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 0 Query: 23 TVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYL----NSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210 S + MSAE Q R+ ++ G A VL + + S PA AG L NSDK V+ P A D D + S V+ +L A++NY+ + LA + Q ++ +V++ + R LN VN VF EDTQRGTD I+R +LQD EL A++ +P RS K++++ KKL KLD AF +L Y Sbjct: 33 AASRTAAVEMSAE-PQSRQAFLQQ--GVAGVLSLAGIAALSQPASAGGLSPVSNSDKWAGVLDPRSAVKDSDKMASDGVKKDLAALKNYQSATKDISDTLAKDPQANVLPKVQQTFKFAEFRQVLNGVNDVFDEDTQRGTDLIIRNMLQDALELSQASKMKPDVPRSPRKVEILNKKLMKLDQAFEKLNAYL 221
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1189382040|gb|OSX69625.1| (hypothetical protein BU14_1334s0002 [Porphyra umbilicalis]) HSP 1 Score: 105.916 bits (263), Expect = 9.970e-25 Identity = 55/155 (35.48%), Postives = 95/155 (61.29%), Query Frame = 0 Query: 55 GVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209 G+ +S +F ++G+ PE IKPSD D + L + V+N +KA+ Y++ V L+++ + Q+ + ++ R+ +S LR+ LN+V++VF E++Q+ TDR+VR I+QDV ELE + R T RS K+ + + +KLD+ F LL++ Sbjct: 70 GIAGVVSRTFFPKSGF----NAPEAIKPSDLSKDAEALGTPAVKNAIKALSGYRDAVKQLQADFKADPQLAVGAKARQLFTISDLRNVLNEVDSVFDEESQKETDRVVRRIIQDVEELETSAATRSNTPRSPKKIDRVERWFEKLDSDFERLLSF 220 The following BLAST results are available for this feature:
BLAST of EWM22295.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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