EWM22295.1, cds8379 (CDS) Nannochloropsis gaditana

Overview
NameEWM22295.1
Unique Namecds8379
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:586966..587050 -
Alignment locationKK037248.1:586790..586849 -
Alignment locationKK037248.1:586321..586571 -
Alignment locationKK037248.1:586098..586203 -
Alignment locationKK037248.1:585716..585846 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22295.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100933g3.1612.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:586966..587050 -
KK037248.1supercontigKK037248.1:586790..586849 -
KK037248.1supercontigKK037248.1:586321..586571 -
KK037248.1supercontigKK037248.1:586098..586203 -
KK037248.1supercontigKK037248.1:585716..585846 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|585102776|gb|EWM22295.1| (hypothetical protein Naga_100933g3 [Nannochloropsis gaditana])

HSP 1 Score: 426.402 bits (1095), Expect = 4.926e-151
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
Query:    1 MRVLPYVFTLVCAVPAFAFMPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210
            MRVLPYVFTLVCAVPAFAFMPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF
Sbjct:    1 MRVLPYVFTLVCAVPAFAFMPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|553189260|ref|XP_005854965.1| (hypothetical protein NGA_0386800 [Nannochloropsis gaditana CCMP526] >gi|422294092|gb|EKU21392.1| hypothetical protein NGA_0386800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 385.571 bits (989), Expect = 4.421e-135
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query:   20 MPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210
            MPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF
Sbjct:    1 MPPTVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 191          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1210526014|dbj|GAX14932.1| (hypothetical protein FisN_12Lh365 [Fistulifera solaris])

HSP 1 Score: 143.28 bits (360), Expect = 2.373e-39
Identity = 71/159 (44.65%), Postives = 104/159 (65.41%), Query Frame = 0
Query:   53 VLGVLASLSPS--FPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209
            V G +A +SPS  F AQ G       P V+ P  AE+D DILKS  VQ+ LK ++ Y+  V  +++ L  ++QV++   + KDLD + LRD+LN VNT F EDTQRGTDR++R+I+QD+ ELE A  Q+ G  RS  +++++  KL KL+ AF++ L +
Sbjct:   52 VTGGIAIVSPSDAFAAQYGEFGKGSSPGVLDPKTAEIDADILKSDAVQSALKKVKGYRSAVQDMQAALKADSQVNVRKTIIKDLDFADLRDTLNTVNTAFEEDTQRGTDRLIRVIMQDITELEQANTQKDGIPRSPRRVEIMEGKLAKLEKAFSDFLAF 210          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1210517530|dbj|GAX23787.1| (hypothetical protein FisN_12Hh365 [Fistulifera solaris])

HSP 1 Score: 140.584 bits (353), Expect = 3.042e-38
Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = 0
Query:   53 VLGVLASLSPS--FPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209
            V G +A   PS  F AQ G       P V+ P  AE+D DILKS  VQ+ LK ++ Y+  V  +++ L  ++QV++   + KDLD + LRD+LN VNT F EDTQRGTDR++R+I+QD+ ELE A  Q+ G  RS  +++++  KL KL+ AF++ L +
Sbjct:   52 VTGGIAFGGPSDAFAAQYGEFGKGSSPGVLDPKTAEIDADILKSDAVQSALKKVKGYRSAVQDMQAALKADSQVNVRKTIIKDLDFADLRDTLNTVNTAFEEDTQRGTDRLIRVIMQDITELEQANTQKDGIPRSPRRVEIMEGKLAKLEKAFSDFLAF 210          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|223996191|ref|XP_002287769.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976885|gb|EED95212.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 140.969 bits (354), Expect = 1.213e-37
Identity = 80/183 (43.72%), Postives = 109/183 (59.56%), Query Frame = 0
Query:   30 ITMSAEMGQDRRDVVKSTFGF--ASVLGVLASLSPSFPAQAGYLNSDKL----PEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAEL 206
            I ++AE G      V +  GF   SV  + ASL+   P QA            PEV+ P DA +D+DILKS  VQ  L A+R Y++ V  ++S LA ++Q D+  ++RKD D S +R  LN +N    EDTQRGTDRIVR ILQD+ ELE A +Q+ G  RSD +LK +  KL KL+ +F ++
Sbjct:   79 IALNAEKG------VSTRIGFLQTSVATIGASLTL-LPGQANAAKYGGFGAGSPEVVDPKDAIIDEDILKSDSVQKGLAAVRGYQQSVVDMKSALASDSQADIGPKIRKDFDFSVIRTDLNAINAALDEDTQRGTDRIVRAILQDITELEVAQKQKAGVPRSDKRLKTVCGKLDKLEKSFRKI 254          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|397647215|gb|EJK77607.1| (hypothetical protein THAOC_00549 [Thalassiosira oceanica])

HSP 1 Score: 134.035 bits (336), Expect = 1.410e-35
Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 0
Query:   77 PEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209
            PEVI P DA VD+DILKS  VQ  L+A++ YK+    L++ L+ + Q D+ +++RKD D S +R  LN +N    EDTQRGTDRIVR ILQD+ ELE + +Q+PG  RS+ +L  +  KL KL+ +F + L +
Sbjct:   83 PEVIDPKDALVDEDILKSEPVQKALEAVKGYKQSTVDLKTVLSSDNQADIGAKIRKDFDFSVIRTDLNAINAALDEDTQRGTDRIVRAILQDITELEVSQKQKPGVPRSEKRLGNVIGKLDKLEKSFDDYLAF 215          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1072229213|gb|OEU13948.1| (hypothetical protein FRACYDRAFT_210017 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 133.65 bits (335), Expect = 2.269e-35
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 0
Query:   50 FASVLGVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209
            F  V GV A   P+ PA AG+ N      V+ P DA +D+D+ K++ VQ  LK ++++   V+ ++  LA N+QVDL   +RK+ + S LR  LN +N+ F E+TQRGTDR++R+ILQD+NELE    Q+ G  RSD ++  +  K+ KL  AF  LL +
Sbjct:   48 FVVVGGVTAFGVPA-PANAGWANGPG-SGVLDPKDAIIDEDVFKTAAVQKALKCVQSFSSAVTDMKKSLAANSQVDLKPVIRKEFEASKLRAELNTLNSAFDEETQRGTDRLIRVILQDLNELEVTNAQKDGVPRSDVRVSKMNGKIDKLQVAFDSLLKF 205          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|219114969|ref|XP_002178280.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410015|gb|EEC49945.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 127.872 bits (320), Expect = 2.592e-33
Identity = 67/155 (43.23%), Postives = 96/155 (61.94%), Query Frame = 0
Query:   55 GVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209
            G L S S +  A+ G   +   PEV+ P+ AE+D DIL SS VQ  LK +  Y+  V  ++  L  + Q +L   + K+LD + +RD++N +NT F EDTQRGTDR++R+ILQD+ ELE A  Q+ G  RS  +L+ +  KL KLD AF + L +
Sbjct:   52 GFLFSPSQAMAAKYGSFGAGS-PEVLDPTTAEIDTDILASSAVQGALKKVEGYRSIVKDMQKALESDGQANLRPIIIKNLDFAKIRDTMNTLNTAFEEDTQRGTDRLIRVILQDITELEQANLQKDGIPRSPRRLENLQGKLVKLDLAFEDYLAF 205          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|299471248|emb|CBN79103.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 115.161 bits (287), Expect = 3.158e-28
Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 0
Query:   23 TVSHPRGITMSAEMGQDRRDVVKSTFGFASVLGVLASLSPSFPAQAGYL----NSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTYF 210
              S    + MSAE  Q R+  ++   G A VL +    + S PA AG L    NSDK   V+ P  A  D D + S  V+ +L A++NY+     +   LA + Q ++  +V++    +  R  LN VN VF EDTQRGTD I+R +LQD  EL  A++ +P   RS  K++++ KKL KLD AF +L  Y 
Sbjct:   33 AASRTAAVEMSAE-PQSRQAFLQQ--GVAGVLSLAGIAALSQPASAGGLSPVSNSDKWAGVLDPRSAVKDSDKMASDGVKKDLAALKNYQSATKDISDTLAKDPQANVLPKVQQTFKFAEFRQVLNGVNDVFDEDTQRGTDLIIRNMLQDALELSQASKMKPDVPRSPRKVEILNKKLMKLDQAFEKLNAYL 221          
BLAST of EWM22295.1 vs. NCBI_GenBank
Match: gi|1189382040|gb|OSX69625.1| (hypothetical protein BU14_1334s0002 [Porphyra umbilicalis])

HSP 1 Score: 105.916 bits (263), Expect = 9.970e-25
Identity = 55/155 (35.48%), Postives = 95/155 (61.29%), Query Frame = 0
Query:   55 GVLASLSPSFPAQAGYLNSDKLPEVIKPSDAEVDQDILKSSEVQNELKAIRNYKEGVSSLRSELAGNAQVDLYSRVRKDLDVSSLRDSLNKVNTVFSEDTQRGTDRIVRIILQDVNELEAATRQRPGTQRSDTKLKLITKKLKKLDAAFAELLTY 209
            G+   +S +F  ++G+      PE IKPSD   D + L +  V+N +KA+  Y++ V  L+++   + Q+ + ++ R+   +S LR+ LN+V++VF E++Q+ TDR+VR I+QDV ELE +   R  T RS  K+  + +  +KLD+ F  LL++
Sbjct:   70 GIAGVVSRTFFPKSGF----NAPEAIKPSDLSKDAEALGTPAVKNAIKALSGYRDAVKQLQADFKADPQLAVGAKARQLFTISDLRNVLNEVDSVFDEESQKETDRVVRRIIQDVEELETSAATRSNTPRSPKKIDRVERWFEKLDSDFERLLSF 220          
The following BLAST results are available for this feature:
BLAST of EWM22295.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102776|gb|EWM22295.1|4.926e-151100.00hypothetical protein Naga_100933g3 [Nannochloropsi... [more]
gi|553189260|ref|XP_005854965.1|4.421e-135100.00hypothetical protein NGA_0386800 [Nannochloropsis ... [more]
gi|1210526014|dbj|GAX14932.1|2.373e-3944.65hypothetical protein FisN_12Lh365 [Fistulifera sol... [more]
gi|1210517530|dbj|GAX23787.1|3.042e-3844.03hypothetical protein FisN_12Hh365 [Fistulifera sol... [more]
gi|223996191|ref|XP_002287769.1|1.213e-3743.72predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397647215|gb|EJK77607.1|1.410e-3548.12hypothetical protein THAOC_00549 [Thalassiosira oc... [more]
gi|1072229213|gb|OEU13948.1|2.269e-3542.50hypothetical protein FRACYDRAFT_210017 [Fragilario... [more]
gi|219114969|ref|XP_002178280.1|2.592e-3343.23predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|299471248|emb|CBN79103.1|3.158e-2838.02conserved unknown protein [Ectocarpus siliculosus][more]
gi|1189382040|gb|OSX69625.1|9.970e-2535.48hypothetical protein BU14_1334s0002 [Porphyra umbi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8406rna8406Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications