EWM22308.1, cds8364 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|585102797|gb|EWM22308.1| (protein of unknown function DUF1990 [Nannochloropsis gaditana]) HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0 Query: 1 MRVVELHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQPLPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLVGESVPEKSVVANKSKWWWK 394 MRVVELHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQPLPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLVGESVPEKSVVANKSKWWWK Sbjct: 1 MRVVELHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQPLPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLVGESVPEKSVVANKSKWWWK 394
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|553185431|ref|XP_005854250.1| (hypothetical protein NGA_0192000, partial [Nannochloropsis gaditana CCMP526] >gi|422294810|gb|EKU22110.1| hypothetical protein NGA_0192000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0 Query: 1 MRVVELHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQPLPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVA 307 MRVVELHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQPLPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVA Sbjct: 1 MRVVELHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQPLPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVA 307
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|1011995083|ref|XP_015954438.1| (UPF0548 protein At2g17695 isoform X4 [Arachis duranensis]) HSP 1 Score: 83.1889 bits (204), Expect = 5.758e-15 Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 0 Query: 222 EGFKVKTQRVLLGKGPETYALAKDKIVNWS-----WGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLV 375 +GF + +RVLLG G ET+ +K + +WS W EGE V ++ L W M PL+ V +E ++G A TL GHLL GEERF V E + +VW++VLSFSK A L L +P V+ QN F + + MQ V Sbjct: 50 DGFLLNNKRVLLGSGVETFEKSKAALKSWSHLGLDWAFVDPKTTIKEGEKFCVCVKEL----LPWVMMPLQVVYVNESR-KRKGVASFGFGSGTLHGHLLAGEERFSV--EIDEKNEVWYEVLSFSKPAHALSVLALPYVKLRQNYFAHESAKLMQNHV 201
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|1021489513|ref|XP_016187765.1| (UPF0548 protein At2g17695-like isoform X6 [Arachis ipaensis]) HSP 1 Score: 82.0333 bits (201), Expect = 1.341e-14 Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 0 Query: 222 EGFKVKTQRVLLGKGPETYALAKDKIVNWS-----WGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLV 375 +GF + +RVLLG G ET+ +K + +WS W EGE V ++ L W M PL+ V +E ++G A TL GHLL GEERF V E + +VW++VLSFSK A L L +P V+ QN F + + MQ V Sbjct: 50 DGFLLNNKRVLLGSGVETFEKSKAALKSWSHLGLDWAFVDPKTAIKEGEKFCVCVKEL----LPWLMMPLQVVYVNESR-KRKGVASFGFGSGTLHGHLLAGEERFSV--EIDEKNEVWYEVLSFSKPAHALSVLALPYVKLRQNYFAHESAKLMQNHV 201
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|1026028394|ref|XP_016560452.1| (PREDICTED: UPF0548 protein At2g17695 isoform X1 [Capsicum annuum] >gi|1026028396|ref|XP_016560453.1| PREDICTED: UPF0548 protein At2g17695 isoform X1 [Capsicum annuum]) HSP 1 Score: 80.8777 bits (198), Expect = 3.985e-14 Identity = 64/209 (30.62%), Postives = 93/209 (44.50%), Query Frame = 0 Query: 172 MGWPHSSRQVQHYLVALRQRKFNH--MYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNW-----SWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQK 373 + W S + Q ++ R FN+ + G T++ AP +++ E +GF V RVL+G G +T+ K + NW +W V G V + W M PL+ V E K+G A + TL+GHLL GEERF + + Q VW+++LSFSK A L P V Q F G A++K Sbjct: 4 LSWTRPSAEDQKACISNRSDSFNYDSRFRGATEKPAPLLKQDKE-----LAKDGFSVNCARVLVGSGLDTFEKGKAALQNWRHFGLNWAFVDPKVPIQSGTKFCVCVKEF----FPWVMMPLQVVYVDENKNLKKGVASFSFGSGTLQGHLLAGEERFSIALDENDQ--VWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHHSGNAVKK 201
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|1040917396|ref|XP_017220949.1| (PREDICTED: UPF0548 protein At2g17695 [Daucus carota subsp. sativus]) HSP 1 Score: 80.4925 bits (197), Expect = 5.091e-14 Identity = 55/162 (33.95%), Postives = 73/162 (45.06%), Query Frame = 0 Query: 222 EGFKVKTQRVLLGKGPETYALAKDKIVNW-----SWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLVGES 378 +GF V +VLLG GPETY K + W +W GE V +I + W M PL+ V +E + A + TL+GHLL GEERF V + Q VW+++LSFSK + R+ P R Q F AMQ V + Sbjct: 50 DGFFVNHAKVLLGSGPETYEKGKTALQTWKHFGMNWAFVDPQTPVQTGEKLCVCVKEI----VPWIMMPLQVVFVNESKMANKPVASFSFGSGTLKGHLLAGEERFSVELDENNQ--VWYEILSFSKPDHFISRIGYPYARLRQKYFANQSSSAMQNYVSSN 205
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|1021027162|gb|KZM84949.1| (hypothetical protein DCAR_027629 [Daucus carota subsp. sativus]) HSP 1 Score: 79.7221 bits (195), Expect = 5.203e-13 Identity = 54/157 (34.39%), Postives = 71/157 (45.22%), Query Frame = 0 Query: 222 EGFKVKTQRVLLGKGPETYALAKDKIVNW-----SWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQK 373 +GF V +VLLG GPETY K + W +W GE V +I + W M PL+ V +E + A + TL+GHLL GEERF V + Q VW+++LSFSK + R+ P R Q F AMQ Sbjct: 50 DGFFVNHAKVLLGSGPETYEKGKTALQTWKHFGMNWAFVDPQTPVQTGEKLCVCVKEI----VPWIMMPLQVVFVNESKMANKPVASFSFGSGTLKGHLLAGEERFSVELDENNQ--VWYEILSFSKPDHFISRIGYPYARLRQKYFANQSSSAMQN 200
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|1026028398|ref|XP_016560454.1| (PREDICTED: UPF0548 protein At2g17695 isoform X2 [Capsicum annuum]) HSP 1 Score: 76.2554 bits (186), Expect = 1.759e-12 Identity = 63/209 (30.14%), Postives = 93/209 (44.50%), Query Frame = 0 Query: 172 MGWPHSSRQVQHYLVALRQRKFNH--MYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNW-----SWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQK 373 + W S + Q ++ + FN+ + G T++ AP +++ E +GF V RVL+G G +T+ K + NW +W V G V + W M PL+ V E K+G A + TL+GHLL GEERF + + Q VW+++LSFSK A L P V Q F G A++K Sbjct: 4 LSWTRPSAEDQKACIS-KSDSFNYDSRFRGATEKPAPLLKQDKE-----LAKDGFSVNCARVLVGSGLDTFEKGKAALQNWRHFGLNWAFVDPKVPIQSGTKFCVCVKEF----FPWVMMPLQVVYVDENKNLKKGVASFSFGSGTLQGHLLAGEERFSIALDENDQ--VWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHHSGNAVKK 200
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|951003081|ref|XP_014507503.1| (PREDICTED: UPF0548 protein At2g17695 [Vigna radiata var. radiata]) HSP 1 Score: 75.485 bits (184), Expect = 3.467e-12 Identity = 55/164 (33.54%), Postives = 78/164 (47.56%), Query Frame = 0 Query: 222 EGFKVKTQRVLLGKGPETYALAKDKI-------VNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLVGES 378 +GF + RVL+G G ET+ +K + +NW++ + V + G+ ++ + W PL+ V +E P K A A TL GHLL GEERF V + Q VW++VLSFSK A L L P V Q F + +AM K + S Sbjct: 50 DGFLLNEARVLVGSGIETFEKSKSALKSWRHFGLNWAFVDPKTPV-----QQGVKFCVCVKEF-FPWLTMPLQVVYVNETPKAKNRRASFAFGSGTLHGHLLAGEERFSVEIDENNQ--VWYEVLSFSKPAHILSFLGYPYVMLRQKHFANESSKAMLKHINSS 205
BLAST of EWM22308.1 vs. NCBI_GenBank
Match: gi|970005464|ref|XP_015063577.1| (PREDICTED: UPF0548 protein At2g17695 isoform X1 [Solanum pennellii] >gi|970005466|ref|XP_015063578.1| PREDICTED: UPF0548 protein At2g17695 isoform X1 [Solanum pennellii]) HSP 1 Score: 75.0998 bits (183), Expect = 3.506e-12 Identity = 61/207 (29.47%), Postives = 95/207 (45.89%), Query Frame = 0 Query: 172 MGWPHSSRQVQHYLVALRQRKFNH--MYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRF---SEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQK 373 + W S + Q + + FN+ + G T++ AP +++ E +GF V RVL+G G ET+ K + NWS + W ++ + G ++ + W M PL+ V E K+G + + TL+GHLL GEERF + + VW+++LSFSK A L P V Q F G A++K Sbjct: 4 LSWTRPSPEEQKACIN-KSGSFNYDKRFRGTTEKPAPLLKQDSE-----LAKDGFSVNCARVLVGSGRETFEKGKAALQNWSRHFGLNWAFVDPKAQIQSGTKFCVCVKEF-FPWLMMPLQVVYVSENKNSKKGASFS-FGSGTLQGHLLAGEERFSIALD--ENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKK 200 The following BLAST results are available for this feature:
BLAST of EWM22308.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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