EWM22321.1, cds8350 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|553179765|ref|XP_005852758.1| (large subunit ribosomal protein L22e [Nannochloropsis gaditana CCMP526] >gi|422295775|gb|EKU23074.1| large subunit ribosomal protein L22e [Nannochloropsis gaditana CCMP526] >gi|585102818|gb|EWM22321.1| ribosomal protein l22 [Nannochloropsis gaditana]) HSP 1 Score: 254.603 bits (649), Expect = 8.927e-86 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
Query: 1 MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE
Sbjct: 1 MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|168014447|ref|XP_001759763.1| (predicted protein [Physcomitrella patens] >gi|162688893|gb|EDQ75267.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 153.295 bits (386), Expect = 1.153e-45 Identity = 71/116 (61.21%), Postives = 95/116 (81.90%), Query Frame = 0
Query: 12 KGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNK--QTFELKYYTVTDEGGEDEE 125
KG KK Q FTIDC PV+D ++D+A+FEKFL DRIKV+GKAGVLG+A++++REK+KI VT+E FSKRYLKYLTKKHLKK +RD++RV+A+NK +EL+Y+ + D+ E+EE
Sbjct: 11 KGKKKAQT-FTIDCGKPVEDKIMDIASFEKFLNDRIKVDGKAGVLGNAISISREKNKISVTSESSFSKRYLKYLTKKHLKKHNVRDWLRVIASNKDRNVYELRYFNIADQDAEEEE 125
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|1035926439|gb|OAY56027.1| (hypothetical protein MANES_03G197000 [Manihot esculenta]) HSP 1 Score: 144.05 bits (362), Expect = 4.714e-42 Identity = 66/106 (62.26%), Postives = 87/106 (82.08%), Query Frame = 0
Query: 21 FTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNK--QTFELKYYTVTDEGGEDE 124
FTIDCS PV+D ++D+A+ EKFL++RIKV GKAGVLGD+V V REKSKI VT++ FS+RYLKYLTKKHLKK +RD++RV+A+NK +EL+Y+ + + GEDE
Sbjct: 21 FTIDCSKPVEDKIMDIASLEKFLQERIKVGGKAGVLGDSVTVTREKSKITVTSDSRFSQRYLKYLTKKHLKKHNVRDWLRVIASNKDPNVYELRYFNIAENEGEDE 126
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|762137042|ref|XP_011451810.1| (PREDICTED: 60S ribosomal protein L22-like [Crassostrea gigas]) HSP 1 Score: 142.51 bits (358), Expect = 2.515e-41 Identity = 58/100 (58.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query: 19 VKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTD 118
+++TIDC+ PV+DG++D+ NFEKFL++RIKVNGK G G+ VA+ R K+KI +T+++PFSKRYLKY+TKK+LKK LRD++RVVA NK+++EL+Y+ + +
Sbjct: 24 LRYTIDCTHPVEDGIMDVGNFEKFLQERIKVNGKTGNFGNNVALERNKNKINLTSDIPFSKRYLKYMTKKYLKKNNLRDWLRVVANNKESYELRYFQINN 123
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|1214691383|gb|OWZ06313.1| (60S ribosomal protein L22 [Phytophthora megakarya]) HSP 1 Score: 140.584 bits (353), Expect = 1.262e-40 Identity = 81/125 (64.80%), Postives = 100/125 (80.00%), Query Frame = 0
Query: 1 MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
MAP KG+K SKKN +KFTIDC+ PV D VLD A+FEKFL DRIKV+GK GVLGDAV + REK+K+QV A PFSKRYLKYLTKK+LKKQQLRDY+ V+A++K T+EL+Y+ + D G + +E
Sbjct: 1 MAP---AHKGKKISKKNLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVDGKTGVLGDAVRITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNDADE 122
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|695370546|ref|XP_009514337.1| (hypothetical protein PHYSODRAFT_353368 [Phytophthora sojae] >gi|348687248|gb|EGZ27062.1| hypothetical protein PHYSODRAFT_353368 [Phytophthora sojae]) HSP 1 Score: 139.428 bits (350), Expect = 3.454e-40 Identity = 81/125 (64.80%), Postives = 98/125 (78.40%), Query Frame = 0
Query: 1 MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
MAP KG+K SKK +KFTIDC+ PV D VLD A+FEKFL DRIKV GK GVLGDAV + REK+K+QV A PFSKRYLKYLTKK+LKKQQLRDY+ V+A++K T+EL+Y+ + D G D+E
Sbjct: 1 MAP---AHKGKKVSKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKTGVLGDAVKITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNADDE 122
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|301123677|ref|XP_002909565.1| (60S ribosomal protein L22, putative [Phytophthora infestans T30-4] >gi|262100327|gb|EEY58379.1| 60S ribosomal protein L22, putative [Phytophthora infestans T30-4]) HSP 1 Score: 137.117 bits (344), Expect = 2.475e-39 Identity = 80/125 (64.00%), Postives = 98/125 (78.40%), Query Frame = 0
Query: 1 MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
MAP KG+K SKK +KFTIDC+ PV D VLD A+FEKFL DRIKV GK GVLGDAV + REK+K+QV A PFSKRYLKYLTKK+LKKQQLRDY+ V+A++K T+EL+Y+ + D G + +E
Sbjct: 1 MAP---AHKGKKVSKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKTGVLGDAVKITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNDADE 122
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|675188707|ref|XP_008903238.1| (hypothetical protein PPTG_10318 [Phytophthora parasitica INRA-310] >gi|566027900|gb|ETI50811.1| hypothetical protein F443_05723 [Phytophthora parasitica P1569] >gi|567965228|gb|ETK90701.1| hypothetical protein L915_05587 [Phytophthora parasitica] >gi|567993943|gb|ETL44109.1| hypothetical protein L916_05528 [Phytophthora parasitica] >gi|568023220|gb|ETL97282.1| hypothetical protein L917_05413 [Phytophthora parasitica] >gi|568053609|gb|ETM50432.1| hypothetical protein L914_05535 [Phytophthora parasitica] >gi|568096692|gb|ETN11439.1| hypothetical protein PPTG_10318 [Phytophthora parasitica INRA-310] >gi|570331603|gb|ETO79551.1| hypothetical protein F444_05773 [Phytophthora parasitica P1976] >gi|570955441|gb|ETP20600.1| hypothetical protein F441_05730 [Phytophthora parasitica CJ01A1] >gi|570990598|gb|ETP48517.1| hypothetical protein F442_05771 [Phytophthora parasitica P10297]) HSP 1 Score: 137.117 bits (344), Expect = 2.949e-39 Identity = 80/125 (64.00%), Postives = 98/125 (78.40%), Query Frame = 0
Query: 1 MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
MAP KG+K SKK +KFTIDC+ PV D VLD A+FEKFL DRIKV GK GVLGDAV + REK+K+QV A PFSKRYLKYLTKK+LKKQQLRDY+ V+A++K T+EL+Y+ + D G + +E
Sbjct: 1 MAPAN---KGKKVSKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKTGVLGDAVKITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNDADE 122
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|953501338|emb|CEG37339.1| (60s ribosomal protein l22 [Plasmopara halstedii]) HSP 1 Score: 137.117 bits (344), Expect = 3.040e-39 Identity = 77/125 (61.60%), Postives = 100/125 (80.00%), Query Frame = 0
Query: 1 MAPTKLGAKGRKGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
MAP + KG+K SKK +KFTIDC+ PV D VLD A+FEKFL DRIK+NGK GVLG++V + REK+K+Q+ A PFSKRYLKYLTKK+LKKQQLRDY+ V+A++K T+EL+Y+ + D G + +E
Sbjct: 1 MAP--IQQKGKKISKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKINGKTGVLGESVKITREKTKLQIVAMPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNIHDAGNDADE 123
BLAST of EWM22321.1 vs. NCBI_GenBank
Match: gi|1173956463|gb|OQS03237.1| (60S ribosomal protein L22 [Thraustotheca clavata]) HSP 1 Score: 135.961 bits (341), Expect = 6.086e-39 Identity = 75/114 (65.79%), Postives = 95/114 (83.33%), Query Frame = 0
Query: 12 KGSKKNQVKFTIDCSDPVKDGVLDMANFEKFLKDRIKVNGKAGVLGDAVAVAREKSKIQVTAELPFSKRYLKYLTKKHLKKQQLRDYMRVVATNKQTFELKYYTVTDEGGEDEE 125
K SKKN +KFTIDCS PV+D VLD+A+FEKFL DRIKVNGK GVLGDAV ++REK+K+ + A PFSKRYLKYLTKK+LKKQQLRDY+ V+A++K T+EL+Y+ + +D+E
Sbjct: 9 KSSKKNLLKFTIDCSTPVEDQVLDVASFEKFLHDRIKVNGKTGVLGDAVTISREKTKLHIAAVAPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNI--HNAKDDE 120 The following BLAST results are available for this feature:
BLAST of EWM22321.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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