rna8361, rna8361 (mRNA) Nannochloropsis gaditana

Overview
Namerna8361
Unique Namerna8361
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2547
Alignment locationKK037248.1:484487..485527 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100277g2.2158.mrna
Orig protein idgnl|cribi|Naga_100277g2.2158
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:484487..485527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100277g2gene8101Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22334.1cds8334Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8361rna8361-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8361 ID=rna8361|Name=rna8361|organism=Nannochloropsis gaditana|type=mRNA|length=2547bp
ATGTGGAGGCGATCACCTTGCCCCTCCACGTCGTTGGACGGGAACAAGGT
CCTCTACCAGTACGACGTGGCCATCGCCGAGGCGAGCGGGCAACCCATCG
ATAAGCTCCCGGCGCTCAAGTCCCGGATGATTTTGAAGGCGGCCTTGGCC
CAAGCGCGAAGTCCGGACATCCCTGCGCTTCCCGTGGCGTACGACGGCCA
GAAGAATTTATTCACCGTCAACGACACCGTGCTGGGGGGTACTCGCACCC
TGACCGCGCGTCTGGAGCGGAAAGGGGGCGGGAAGAAGAAGAAGAAGGAG
GAAGAGCAGTCCTTGGATGAGTACAGGGTCCAGGTGCAAATGGTGGGGGA
GCGGCGCATGACGGATATCGTCGATTACGTGCAGGGCCGGGACACCTCCG
CCCGGCCTCAGGATATGATCAATGCCCTTGATGTGGTTATGAAGGAAGAG
GCCCTGAAGCTGTACGTAGAGATTGGCCGCGCCAAATTTTTCTCGCCCGA
GAACCCGGCCACCATTTTCAACGGTCTCTTCCATGCCTACCGGGGTTTCT
TCCAGTCCCTCCGCCCCACCCAGTCGGGTCTAACCTTGAATGTGGACCAG
GCGGTGGCGGCCGTGATGCGGGACCAGCCCTTGGAGGAGTTTGTGGGCGC
CTTGCTGCACATGGATGCCCCCCCCCGCCGGTTGGATGAGCGACAGGCAC
GGGCGGTTTCCAAGGCCGTGAAGGGGCTGAAAATCGAGGTGACACACCGG
TCCAGCGGGCGTACCTACACCGTCATGGGTCTCTCCCCACAGCCTGCCGA
CCAGATCCGCTTTATGAACGAGGAAGTGGGGGCGGAACAGACGATTGCGG
CCTACTTTCAAAGCAAGTACAAGAAGCAGCTTCGGTATCCCTCCCTTCAT
TGCGTGCGCATGGGCTCCAAACGCAAGCCCACGTTCTTCCCCATCGAGGT
GTGCAAGGTGGTGGCGGGGCAGCGGATCCCGGAGCAGTTTATCCCGAACG
TAGCGGCGGACATTGTGGACATCGCCGCGGTGCCTCCCTCCAACAGGTTC
AACAAAGTATATAAGCAGGTGCAGGCGATCGCAGCGTCGGGGAAGCTGGC
GGCCCAGTTTGGGTTGAAATTGGAGCCCAAGGTCCTGCGCGTCAAAGGCC
GTTTTTTGCCCAGTCCGCGGGTTACGGTCAAGGGATTCAACGGCCGCGAA
CTGACCGAGCAGACTTCAGGAGGGGTCTGGTCGCTGATAAAGAAGATTTT
CTACTCCCCCGCGTCCTTGTCCCATTGGAGTGTAGTGTCCTTTTGCGGCA
GACACCGTTTGGACGACCAGACTGTGGGTAACTACATTGATGGTTTGCGG
GACGCGTTGGGAAAGACTGGCGTCAGGGCCCCACCGCCTGAAAAGGTGAT
CTTCGCGGAGGACAAGCAAGACACGGTATCCAATTGCTTGCGGAAGGTGC
TTCGTTACGGTCCGGGGGAGAAGCAGGGCGATCCCTCGAAGGTTGTTACG
CAGCTGGTCGTGTGCCTGATCGAAAAAGAGGTGCCGATTTACACGGAAGT
GAAGCGGGCGGCAGAGACCGTGCACGGGGTGATGACCCAGTGCGTGACGC
GGGACAATGTGCGCAAGTGCAACTTTATGACGAATGTGAACATTTCTTTG
AAGGTGAACGAGAAACTGGGCGGAATCAACAGCATAGTCGCCAAGGAGCA
CATGAGCTACATTCAGAAAAATCGGGTGATGATTCTAGGTGCGGATGTGA
ACCATGCGCGAGTGGGGTCAATGCGACCCTCCTTTGCGGCGGTGACAGGG
TCCTTGGATGCAGACGCACGAAGGCATACCGCGGTGCTGCAGGCCCAGTC
GCCCCGCCTGGAAATCATCCAGGATTTGTCCAACATGGTGCAAAAACTGC
TTCTCAAGTTTCACAAAACGACCGGGTCGCTCCCGCACAAGCTCATCTTC
TATCGCGACGGGGTGTCGGAAGGGCAGTTCAAGGAAGTGCTTCAATACGA
GGTCCCCGCAGTCAAGAGCGCGTGCTCGAGAATCAACTCGAAATATGAGC
CGAGCTTGACCTTCATTGTGGTCCAAAAACGGCATAACACTCGCTTTAAT
GGAGTGGAGCGTGCGGAGCAGGATGGAAAATCTGGGAATCTGAAATCCGG
ACTGGTTGTAGATGCGGGCGTGTGCCACCCATTCGAGTACGATTTTTTCC
TGCTCTCCCACGCGGGGCTTAAGGGAACCAGCAAGCCCTCATACTATAGG
GTCCTCCGTGACGAATCCAAGATGGGCCCTGACGAGTTGCAGCAGCTCAC
CTACTTTCTATGCCATAACTACGCGCGCTGCACCCGCTCCGTGTCCATGG
TGCCGGCGGTGTACTACTCCCATTTGGCGGCCAAACGTGCCCAGATCTTC
TTGACGGACGATGCATTGGCGAGCGAGAGTGGCACGGAGATGTCGACTGA
CGGGAATGACGAGACTGACATATATGCGGGGATAAACTGGGATGGGACGA
TGATCAAGATGAAATCGCCGGTGGTTGATAATATGTGGTTTCTCTGA
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protein sequence of rna8361

>rna8361-protein ID=rna8361-protein|Name=rna8361|organism=Nannochloropsis gaditana|type=polypeptide|length=346bp
MHPEARTPPSPTPPRSISLASLSFLTVLSLKLLSMLLYHALGPVFNRSLP
SHLAAEGPSLLGVDHVLRVPVPPPGKGGRNRGGDRDELGDDSLFMTLLVK
KALPPAGEGGEWQGEGGGGSKGGVVREEKGKGNLPPLLFLLHGFPDDAST
FHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAW
AQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLF
GHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSW
YMLFIVSGPKEGGMEYRAGGGGCTRCCFFSGAGRRKRPRFAGTFGG
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mRNA from alignment at KK037248.1:484487..485527-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8361 ID=rna8361|Name=rna8361|organism=Nannochloropsis gaditana|type=mRNA|length=1041bp|location=Sequence derived from alignment at KK037248.1:484487..485527- (Nannochloropsis gaditana)
ATGCACCCAGAGGCCCGAACCCCCCCTTCCCCCACCCCTCCCCGCTCCAT
ATCCCTCGCCTCCCTCTCTTTCCTCACGGTTCTCTCCCTGAAGCTCCTCT
CCATGCTCCTCTACCACGCCCTCGGCCCCGTCTTCAACCGCTCCCTCCCT
TCCCACCTGGCGGCAGAGGGGCCCTCCCTCCTAGGCGTAGATCACGTGCT
TCGGGTGCCGGTGCCCCCTCCTGGAAAGGGAGGGAGGAATCGAGGCGGGG
ACAGGGACGAATTGGGCGACGATTCTCTTTTCATGACGCTCTTGGTCAAG
AAAGCTCTGCCTCCAGCAGGAGAGGGAGGGGAGTGGCAAGGGGAGGGAGG
AGGCGGGAGCAAAGGTGGTGTCGTAAGGGAGGAAAAGGGTAAAGGCAACC
TCCCCCCCCTCCTCTTCCTCCTGCACGGCTTTCCCGACGACGCCAGCACC
TTCCATGCGCAGGTTCTCCCCTTTGCTCGCGCCGGTTTCGACGTCCTCCT
CCCCGTCATGCCCGGGTACGAGCCCAGCACAGCCCTCCTTCCCTCCTCAT
CATACTCCCTCCCGTCCCTTGCTACCATGCTAGAAGATGTGATAGCCTGG
GCGCAGTCGCCTGCCCTGGCCCGTGCGTTGCGCGGAGGGGAAGCAGAGGG
TGGGAAAGGGGAGGAGGGACAGCAAGGGGGGTGGTTGGAGGAAGGGGGAA
TCGGGGAGGAAGAATGCAGGAACCCACTTCCGCGCGACGTGCACCTGTTT
GGCCACGATTGGGGCGCCGTGCTTGCCTACATATTGGCGCGAAAGGGGAG
CAGGGAAAAAGTTCGCGTGACCTCGGTGGTCACCGTGGCCGTCCCTCACG
AGGCCGCCCGAGGCTTCCTCACGCATCCTCGCCAGTTCCTGAATTCCTGG
TACATGCTCTTCATTGTGAGTGGACCGAAGGAGGGAGGGATGGAGTATCG
TGCGGGAGGAGGGGGATGTACCCGTTGCTGTTTCTTCTCAGGTGCCGGGA
GGCGGAAAAGGCCACGTTTTGCAGGGACTTTCGGAGGTTGA
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Coding sequence (CDS) from alignment at KK037248.1:484487..485527-

>rna8361 ID=rna8361|Name=rna8361|organism=Nannochloropsis gaditana|type=CDS|length=1041bp|location=Sequence derived from alignment at KK037248.1:484487..485527- (Nannochloropsis gaditana)
ATGCACCCAGAGGCCCGAACCCCCCCTTCCCCCACCCCTCCCCGCTCCAT
ATCCCTCGCCTCCCTCTCTTTCCTCACGGTTCTCTCCCTGAAGCTCCTCT
CCATGCTCCTCTACCACGCCCTCGGCCCCGTCTTCAACCGCTCCCTCCCT
TCCCACCTGGCGGCAGAGGGGCCCTCCCTCCTAGGCGTAGATCACGTGCT
TCGGGTGCCGGTGCCCCCTCCTGGAAAGGGAGGGAGGAATCGAGGCGGGG
ACAGGGACGAATTGGGCGACGATTCTCTTTTCATGACGCTCTTGGTCAAG
AAAGCTCTGCCTCCAGCAGGAGAGGGAGGGGAGTGGCAAGGGGAGGGAGG
AGGCGGGAGCAAAGGTGGTGTCGTAAGGGAGGAAAAGGGTAAAGGCAACC
TCCCCCCCCTCCTCTTCCTCCTGCACGGCTTTCCCGACGACGCCAGCACC
TTCCATGCGCAGGTTCTCCCCTTTGCTCGCGCCGGTTTCGACGTCCTCCT
CCCCGTCATGCCCGGGTACGAGCCCAGCACAGCCCTCCTTCCCTCCTCAT
CATACTCCCTCCCGTCCCTTGCTACCATGCTAGAAGATGTGATAGCCTGG
GCGCAGTCGCCTGCCCTGGCCCGTGCGTTGCGCGGAGGGGAAGCAGAGGG
TGGGAAAGGGGAGGAGGGACAGCAAGGGGGGTGGTTGGAGGAAGGGGGAA
TCGGGGAGGAAGAATGCAGGAACCCACTTCCGCGCGACGTGCACCTGTTT
GGCCACGATTGGGGCGCCGTGCTTGCCTACATATTGGCGCGAAAGGGGAG
CAGGGAAAAAGTTCGCGTGACCTCGGTGGTCACCGTGGCCGTCCCTCACG
AGGCCGCCCGAGGCTTCCTCACGCATCCTCGCCAGTTCCTGAATTCCTGG
TACATGCTCTTCATTGTGAGTGGACCGAAGGAGGGAGGGATGGAGTATCG
TGCGGGAGGAGGGGGATGTACCCGTTGCTGTTTCTTCTCAGGTGCCGGGA
GGCGGAAAAGGCCACGTTTTGCAGGGACTTTCGGAGGTTGA
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Synonyms
Publications